FFCP PHASE1:Mm9::chr16:8738992..8739045,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=252870|HGNC=|MCL_coexpression_id=599|UniProt=E0CY04|association_with_transcript=-479bp_to_ENSMUST00000160326_5end|description=CAGE_peak_1_at_Usp7_5end|id=chr16:8738992..8739045,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.59e-13!29;UBERON:0005057!1.43e-10!51;UBERON:0002370!2.94e-10!23;UBERON:0000974!2.94e-10!23;UBERON:0004807!2.94e-10!23;UBERON:0005058!2.94e-10!23;UBERON:0003351!2.94e-10!23;UBERON:0009113!2.94e-10!23;UBERON:0003295!2.94e-10!23;UBERON:0009722!2.94e-10!23;UBERON:0005562!2.94e-10!23;UBERON:0007690!2.94e-10!23;UBERON:0006562!5.26e-10!24;UBERON:0001557!5.26e-10!24;UBERON:0001042!5.26e-10!24;UBERON:0008814!5.26e-10!24;UBERON:0009145!5.26e-10!24;UBERON:0003929!1.40e-09!55;UBERON:0003408!2.19e-09!24;UBERON:0000153!9.77e-09!94;UBERON:0007811!1.46e-08!86;UBERON:0002390!3.38e-08!45;UBERON:0003061!3.38e-08!45;UBERON:0000064!4.56e-08!99;UBERON:0000072!1.16e-07!27;UBERON:0005911!1.89e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.59e-13,29;UBERON:0005057,1.59e-13,29;UBERON:0002370,2.94e-10,23;UBERON:0000974,2.94e-10,23;UBERON:0004807,2.94e-10,23;UBERON:0005058,2.94e-10,23;UBERON:0003351,2.94e-10,23;UBERON:0009113,2.94e-10,23;UBERON:0003295,2.94e-10,23;UBERON:0009722,2.94e-10,23;UBERON:0005562,2.94e-10,23;UBERON:0007690,2.94e-10,23;UBERON:0006562,5.26e-10,24;UBERON:0001557,5.26e-10,24;UBERON:0001042,5.26e-10,24;UBERON:0008814,5.26e-10,24;UBERON:0009145,5.26e-10,24;UBERON:0000077,6.42e-10,35;UBERON:0003929,1.40e-09,55;UBERON:0003408,2.19e-09,24;UBERON:0002390,3.38e-08,45;UBERON:0003061,3.38e-08,45;UBERON:0000072,1.16e-07,27;UBERON:0000153,1.75e-07,43;UBERON:0005911,1.89e-07,69;UBERON:0007811,5.42e-07,36|phase1_expression=44.3612306480279,40.4811472861659,49.1399178540699,60.492842261366,66.6191320828642,60.4365378882803,53.7309073369709,60.042345400333,81.6574588479667,71.62374505453,42.4620561199252,58.3932203845863,62.1458649650277,67.401130265047,130.912136393555,125.737141049082,173.49134577578,58.9914249219905,54.8457734422955,54.7462650819459,33.5920996096726,40.3121261875594,30.2991755401165,27.6786891432594,28.4467508523291,37.8993096315913,30.1533397311352,32.1052136701975,25.6531616266105,39.8207605020691,29.2684274065002,59.6928833052053,68.2721914218873,47.5445043046316,47.0828140194578,38.5664377231702,50.0214922842804,50.2237956884289,32.0347491254758,34.5525671022707,59.9996117791635,65.5723665560108,46.1234835379596,27.4455063186758,26.9662637043909,19.0888622248149,14.0830441982647,17.8780628231966,15.817405156882,23.331587888914,22.2578410384326,18.6878333674463,67.7841728473255,70.3601277751004,77.9737614010516,30.3566134522417,30.0860111935695,19.5955395065428,46.7351024585671,62.4209355540999,44.3681982454325,15.5868484751801,9.78224275722253,13.0485459005803,23.7327927016074,19.1829631035447,19.1744070731779,19.2109152660777,49.5636346834523,60.7526722492608,48.1644161494665,31.4216082844184,22.0868540951614,47.7714116938321,49.6479539874464,41.3648453974509,56.1590993096882,45.584379696412,45.7747469103606,52.7545150920775,46.2012600192169,45.3194632384381,34.0603258781685,35.4540444319958,45.9922725808198,54.5062883126285,40.4335573469452,50.7006492644818,24.7624652199512,22.2936102315017,35.3634676216047,19.7897491705719,41.4782513561728,43.1762553310254,27.9403859502498,28.2256938871321,33.9875496718839,33.2339129027213,23.9003124234639,27.5604868118065,37.464349660597,50.047326191584,48.4129955442627,42.6640021891999,33.7726023977494,27.3628654713106,31.8480400359313,40.3069095408282,19.6792791571851,33.2510391505207,39.2076838491467,38.0581847890177,37.3597105554815,27.7329658616826,37.1580314548827,25.2589848572648,29.4162011603905,27.907675885543,68.1150125001403,49.1771223840124,82.5947279041872,87.27754556434,26.0948465705371,51.8222010710438,57.5978443737001,34.4867024531598,45.5297473122497,28.1954283566902,36.3420849428965,41.3422164757311,48.952564501593,54.4083344648703,44.3252016490305,41.1701886301832,36.5706958424826,45.9142774481754,40.9394242678271,60.8350086283355,28.3049489445716,36.40644106836,39.5566146606619,27.1284483231498,34.5719289226271,39.4846622729573,42.0465564755206,41.765072812861,44.4146174413115,41.3925393182425,46.3471184805611,49.167580843633,40.8206608060361,37.7016659775429,43.0973236299677,48.4070511465812,40.5390808723649,39.4087848300616,21.066395619397,27.0215302470451,33.5312929286799,31.2759916528608,30.2538617375614,33.3114813702878,33.1442629819294,27.3502282128891,29.773552787264,29.5318109833018,35.948635787549,31.6434077815029,32.2537305830422,33.3259952080563,32.7517990565257,30.1171974096185,37.1039694841876,29.1227928710007,36.1698711530299,48.3651678182637,25.1118275067686,34.9074747995878,42.6576501070468,39.2479975444141,41.7530574683582,30.4542122181247,32.2448163575062,27.0120389079834,27.9972146311262,28.9870160314259,29.1548842208313,27.65494961372,31.3892180261783,28.7622210769351,34.3659499300764,30.4686148079182,39.2612554972879,45.8136535565013,42.8289395557706,44.5996407981238,36.4630675875136,42.0814919341911,35.8551165494539,24.503284564614,31.0857481125922,27.2707732267179,23.7162101669719,89.5958217695425,87.0756348351489,95.341535651178,114.615968584504,84.4120059133459,67.7304765738577,69.0470729881945,65.6647668438893,47.22456306835,93.4493342427805,32.3762624471598,29.3315412727687,32.0775174992832,27.4478042688526,32.806159452709,33.8098338004887,32.5925228245234,37.1560146287819,39.3808598998436,39.8973422090454,36.1813516074322,36.8967643373321,41.9537342894267,36.7289885767425,36.3202091023991,42.7338780002065,35.5583392933151,35.7457912462404,42.5268232229644,33.1740824666399,40.2490206025845,41.7999632066181,38.6311444826625,38.8532427770457,36.8044695899518,23.9345020249946,31.5588659005466,48.5882657901035,35.1394869866975,50.1936516717422,45.1651028130323,48.3473122758795,66.2399082045868,44.1243664825635,46.1764255499873,43.4816555741176,70.0480469799539,32.220399342277,32.9421366784422,44.7939138222334,38.4380386526008,35.84118735179,34.7176309701623,36.5811503927349,34.3261245155735,33.9597176812889,31.6658202382245,39.5395288547378,34.1721705708855,38.8582142439346,36.028190404683,32.6797686582496,35.0660847043835,33.703520969625,41.4140516272014,39.0663225023919,38.7950033407182,40.0788928031538,45.1273108533239,36.8589806148751,33.4911444026059,31.4460088805372,29.444657850071,35.5050720868489,54.4124634706884,44.7256461947658,42.6412379242062,41.4222033690884,41.3635067357554,33.228815375803,40.0518652342701,100.472077909137,47.0562058956147,61.8549721414837,116.223337971894,101.700505424443,116.44809016212,39.6049741885683,52.7616975260191,53.2069899147032,13.3653886522116,46.6595590532175,35.3775872800717,35.9657784936598,29.899626330069,33.191109689419,31.0187996685088,36.2848670634225,30.6254452121315,33.6998930558661,31.6883049674332,46.7865139107878,46.2006127275895,30.9407377154773,44.918224507475,34.8731523389874,30.5810587138308,36.8501729347667,36.8478409108379,47.501283024847,39.378211694639,36.291780788491,86.5870470521208,37.3014396133902,45.5009540240185,64.9604114888975,67.4930642666405,75.6975961716619,72.1172697119813,66.017218647036,71.787145913133,79.7123197611298,82.2741670716619,85.0807298858039,94.0951811242422,96.3065673976128,40.1312778998924,46.6170502085536,50.0603319880874,36.0951925182769,32.455851797408,28.5277362685797,37.1797797262548,44.1598860902876,29.0911820340511,48.0039066224507,42.8102469951675,37.8111038870002,47.4314783268578,46.5856113444037,53.6329667146687,42.5264175146038,52.2372595740096,40.3296743995942,44.0096264989047,48.157329279058,45.4888355677175,38.9272621119426,42.0574620528149,50.7263853559717,42.2840069435033,37.7819437262746,42.2371867339733,38.189385941426,33.6087291645851,35.994060584414,45.8362009568165,40.9213387643386,41.7443993679748,41.1812312411747,42.8664322154766,44.7313498147142,39.1605717541321,44.0931913859538,39.4493105960185,30.8582327146874,36.0275886503455,36.9576094418347,43.3132321564339,42.4433305673141,35.7073645302875,30.7318994426258,32.6206442182925,38.7041724460706,28.6182558545447,44.7254018328137,42.9479543157457,31.9200213672358,38.2693997729336,36.6522560864169,40.2195030480093,33.218288399248,38.0321765665488,39.4053964061817,34.4122613826444,39.4175320554716|short_description=p1@Usp7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=252870 | |||
|HGNC= | |||
|MCL_coexpression_id=599 | |||
|TSSclassifier=NA | |||
|UniProt=E0CY04 | |||
|association_with_transcript=-479bp_to_ENSMUST00000160326_5end | |||
|cluster_id=chr16:8738992..8739045,- | |||
|description=CAGE_peak_1_at_Usp7_5end | |||
|id=chr16:8738992..8739045,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.59e-13!29;UBERON:0005057!1.43e-10!51;UBERON:0002370!2.94e-10!23;UBERON:0000974!2.94e-10!23;UBERON:0004807!2.94e-10!23;UBERON:0005058!2.94e-10!23;UBERON:0003351!2.94e-10!23;UBERON:0009113!2.94e-10!23;UBERON:0003295!2.94e-10!23;UBERON:0009722!2.94e-10!23;UBERON:0005562!2.94e-10!23;UBERON:0007690!2.94e-10!23;UBERON:0006562!5.26e-10!24;UBERON:0001557!5.26e-10!24;UBERON:0001042!5.26e-10!24;UBERON:0008814!5.26e-10!24;UBERON:0009145!5.26e-10!24;UBERON:0003929!1.40e-09!55;UBERON:0003408!2.19e-09!24;UBERON:0000153!9.77e-09!94;UBERON:0007811!1.46e-08!86;UBERON:0002390!3.38e-08!45;UBERON:0003061!3.38e-08!45;UBERON:0000064!4.56e-08!99;UBERON:0000072!1.16e-07!27;UBERON:0005911!1.89e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.59e-13,29;UBERON:0005057,1.59e-13,29;UBERON:0002370,2.94e-10,23;UBERON:0000974,2.94e-10,23;UBERON:0004807,2.94e-10,23;UBERON:0005058,2.94e-10,23;UBERON:0003351,2.94e-10,23;UBERON:0009113,2.94e-10,23;UBERON:0003295,2.94e-10,23;UBERON:0009722,2.94e-10,23;UBERON:0005562,2.94e-10,23;UBERON:0007690,2.94e-10,23;UBERON:0006562,5.26e-10,24;UBERON:0001557,5.26e-10,24;UBERON:0001042,5.26e-10,24;UBERON:0008814,5.26e-10,24;UBERON:0009145,5.26e-10,24;UBERON:0000077,6.42e-10,35;UBERON:0003929,1.40e-09,55;UBERON:0003408,2.19e-09,24;UBERON:0002390,3.38e-08,45;UBERON:0003061,3.38e-08,45;UBERON:0000072,1.16e-07,27;UBERON:0000153,1.75e-07,43;UBERON:0005911,1.89e-07,69;UBERON:0007811,5.42e-07,36 | |||
|phase1_expression=44.3612306480279,40.4811472861659,49.1399178540699,60.492842261366,66.6191320828642,60.4365378882803,53.7309073369709,60.042345400333,81.6574588479667,71.62374505453,42.4620561199252,58.3932203845863,62.1458649650277,67.401130265047,130.912136393555,125.737141049082,173.49134577578,58.9914249219905,54.8457734422955,54.7462650819459,33.5920996096726,40.3121261875594,30.2991755401165,27.6786891432594,28.4467508523291,37.8993096315913,30.1533397311352,32.1052136701975,25.6531616266105,39.8207605020691,29.2684274065002,59.6928833052053,68.2721914218873,47.5445043046316,47.0828140194578,38.5664377231702,50.0214922842804,50.2237956884289,32.0347491254758,34.5525671022707,59.9996117791635,65.5723665560108,46.1234835379596,27.4455063186758,26.9662637043909,19.0888622248149,14.0830441982647,17.8780628231966,15.817405156882,23.331587888914,22.2578410384326,18.6878333674463,67.7841728473255,70.3601277751004,77.9737614010516,30.3566134522417,30.0860111935695,19.5955395065428,46.7351024585671,62.4209355540999,44.3681982454325,15.5868484751801,9.78224275722253,13.0485459005803,23.7327927016074,19.1829631035447,19.1744070731779,19.2109152660777,49.5636346834523,60.7526722492608,48.1644161494665,31.4216082844184,22.0868540951614,47.7714116938321,49.6479539874464,41.3648453974509,56.1590993096882,45.584379696412,45.7747469103606,52.7545150920775,46.2012600192169,45.3194632384381,34.0603258781685,35.4540444319958,45.9922725808198,54.5062883126285,40.4335573469452,50.7006492644818,24.7624652199512,22.2936102315017,35.3634676216047,19.7897491705719,41.4782513561728,43.1762553310254,27.9403859502498,28.2256938871321,33.9875496718839,33.2339129027213,23.9003124234639,27.5604868118065,37.464349660597,50.047326191584,48.4129955442627,42.6640021891999,33.7726023977494,27.3628654713106,31.8480400359313,40.3069095408282,19.6792791571851,33.2510391505207,39.2076838491467,38.0581847890177,37.3597105554815,27.7329658616826,37.1580314548827,25.2589848572648,29.4162011603905,27.907675885543,68.1150125001403,49.1771223840124,82.5947279041872,87.27754556434,26.0948465705371,51.8222010710438,57.5978443737001,34.4867024531598,45.5297473122497,28.1954283566902,36.3420849428965,41.3422164757311,48.952564501593,54.4083344648703,44.3252016490305,41.1701886301832,36.5706958424826,45.9142774481754,40.9394242678271,60.8350086283355,28.3049489445716,36.40644106836,39.5566146606619,27.1284483231498,34.5719289226271,39.4846622729573,42.0465564755206,41.765072812861,44.4146174413115,41.3925393182425,46.3471184805611,49.167580843633,40.8206608060361,37.7016659775429,43.0973236299677,48.4070511465812,40.5390808723649,39.4087848300616,21.066395619397,27.0215302470451,33.5312929286799,31.2759916528608,30.2538617375614,33.3114813702878,33.1442629819294,27.3502282128891,29.773552787264,29.5318109833018,35.948635787549,31.6434077815029,32.2537305830422,33.3259952080563,32.7517990565257,30.1171974096185,37.1039694841876,29.1227928710007,36.1698711530299,48.3651678182637,25.1118275067686,34.9074747995878,42.6576501070468,39.2479975444141,41.7530574683582,30.4542122181247,32.2448163575062,27.0120389079834,27.9972146311262,28.9870160314259,29.1548842208313,27.65494961372,31.3892180261783,28.7622210769351,34.3659499300764,30.4686148079182,39.2612554972879,45.8136535565013,42.8289395557706,44.5996407981238,36.4630675875136,42.0814919341911,35.8551165494539,24.503284564614,31.0857481125922,27.2707732267179,23.7162101669719,89.5958217695425,87.0756348351489,95.341535651178,114.615968584504,84.4120059133459,67.7304765738577,69.0470729881945,65.6647668438893,47.22456306835,93.4493342427805,32.3762624471598,29.3315412727687,32.0775174992832,27.4478042688526,32.806159452709,33.8098338004887,32.5925228245234,37.1560146287819,39.3808598998436,39.8973422090454,36.1813516074322,36.8967643373321,41.9537342894267,36.7289885767425,36.3202091023991,42.7338780002065,35.5583392933151,35.7457912462404,42.5268232229644,33.1740824666399,40.2490206025845,41.7999632066181,38.6311444826625,38.8532427770457,36.8044695899518,23.9345020249946,31.5588659005466,48.5882657901035,35.1394869866975,50.1936516717422,45.1651028130323,48.3473122758795,66.2399082045868,44.1243664825635,46.1764255499873,43.4816555741176,70.0480469799539,32.220399342277,32.9421366784422,44.7939138222334,38.4380386526008,35.84118735179,34.7176309701623,36.5811503927349,34.3261245155735,33.9597176812889,31.6658202382245,39.5395288547378,34.1721705708855,38.8582142439346,36.028190404683,32.6797686582496,35.0660847043835,33.703520969625,41.4140516272014,39.0663225023919,38.7950033407182,40.0788928031538,45.1273108533239,36.8589806148751,33.4911444026059,31.4460088805372,29.444657850071,35.5050720868489,54.4124634706884,44.7256461947658,42.6412379242062,41.4222033690884,41.3635067357554,33.228815375803,40.0518652342701,100.472077909137,47.0562058956147,61.8549721414837,116.223337971894,101.700505424443,116.44809016212,39.6049741885683,52.7616975260191,53.2069899147032,13.3653886522116,46.6595590532175,35.3775872800717,35.9657784936598,29.899626330069,33.191109689419,31.0187996685088,36.2848670634225,30.6254452121315,33.6998930558661,31.6883049674332,46.7865139107878,46.2006127275895,30.9407377154773,44.918224507475,34.8731523389874,30.5810587138308,36.8501729347667,36.8478409108379,47.501283024847,39.378211694639,36.291780788491,86.5870470521208,37.3014396133902,45.5009540240185,64.9604114888975,67.4930642666405,75.6975961716619,72.1172697119813,66.017218647036,71.787145913133,79.7123197611298,82.2741670716619,85.0807298858039,94.0951811242422,96.3065673976128,40.1312778998924,46.6170502085536,50.0603319880874,36.0951925182769,32.455851797408,28.5277362685797,37.1797797262548,44.1598860902876,29.0911820340511,48.0039066224507,42.8102469951675,37.8111038870002,47.4314783268578,46.5856113444037,53.6329667146687,42.5264175146038,52.2372595740096,40.3296743995942,44.0096264989047,48.157329279058,45.4888355677175,38.9272621119426,42.0574620528149,50.7263853559717,42.2840069435033,37.7819437262746,42.2371867339733,38.189385941426,33.6087291645851,35.994060584414,45.8362009568165,40.9213387643386,41.7443993679748,41.1812312411747,42.8664322154766,44.7313498147142,39.1605717541321,44.0931913859538,39.4493105960185,30.8582327146874,36.0275886503455,36.9576094418347,43.3132321564339,42.4433305673141,35.7073645302875,30.7318994426258,32.6206442182925,38.7041724460706,28.6182558545447,44.7254018328137,42.9479543157457,31.9200213672358,38.2693997729336,36.6522560864169,40.2195030480093,33.218288399248,38.0321765665488,39.4053964061817,34.4122613826444,39.4175320554716 | |||
|short_description=p1@Usp7 | |||
}} |
Latest revision as of 19:26, 25 September 2015
Short description: | p1@Usp7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Usp7_5end |
Coexpression cluster: | MCL_coexpression_mm9:599 |
Association with transcript: | -479bp_to_ENSMUST00000160326_5end |
EntrezGene: | Usp7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.59e-13 | 29 |
immune organ | 1.59e-13 | 29 |
thymus | 2.94e-10 | 23 |
neck | 2.94e-10 | 23 |
respiratory system epithelium | 2.94e-10 | 23 |
hemolymphoid system gland | 2.94e-10 | 23 |
pharyngeal epithelium | 2.94e-10 | 23 |
thymic region | 2.94e-10 | 23 |
pharyngeal gland | 2.94e-10 | 23 |
entire pharyngeal arch endoderm | 2.94e-10 | 23 |
thymus primordium | 2.94e-10 | 23 |
early pharyngeal endoderm | 2.94e-10 | 23 |
pharynx | 5.26e-10 | 24 |
upper respiratory tract | 5.26e-10 | 24 |
chordate pharynx | 5.26e-10 | 24 |
pharyngeal arch system | 5.26e-10 | 24 |
pharyngeal region of foregut | 5.26e-10 | 24 |
mixed endoderm/mesoderm-derived structure | 6.42e-10 | 35 |
gut epithelium | 1.40e-09 | 55 |
gland of gut | 2.19e-09 | 24 |
hematopoietic system | 3.38e-08 | 45 |
blood island | 3.38e-08 | 45 |
segment of respiratory tract | 1.16e-07 | 27 |
anterior region of body | 1.75e-07 | 43 |
endo-epithelium | 1.89e-07 | 69 |
craniocervical region | 5.42e-07 | 36 |