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FFCP PHASE1:Mm9::chr11:80290838..80290885,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:80290838..80290885,+
|DHSsupport=NA
|short_description=p2@Cdk5r1
|DPIdataset=NA
|description=CAGE_peak_2_at_Cdk5r1_5end
|association_with_transcript=290bp_to_ENSMUST00000053413,NM_009871,uc011yat.1_5end
|EntrezGene=12569
|EntrezGene=12569
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=P61809,Q542T9
|UniProt=P61809,Q542T9
|association_with_transcript=290bp_to_ENSMUST00000053413,NM_009871,uc011yat.1_5end
|cluster_id=chr11:80290838..80290885,+
|description=CAGE_peak_2_at_Cdk5r1_5end
|id=chr11:80290838..80290885,+
|ontology_enrichment_celltype=CL:0000117!7.97e-19!23;CL:0000337!7.97e-19!23;CL:0000540!4.09e-15!33;CL:0000047!4.09e-15!33;CL:0000031!4.09e-15!33;CL:0000404!4.09e-15!33;CL:0000393!5.16e-11!39;CL:0000211!5.16e-11!39;CL:0002319!2.77e-10!43;CL:0000221!8.52e-10!44;CL:0000133!8.52e-10!44;CL:0000055!2.39e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-38,23;CL:0000337,1.82e-38,23;CL:0000540,7.28e-25,33;CL:0000047,7.28e-25,33;CL:0000031,7.28e-25,33;CL:0000404,7.28e-25,33;CL:0000393,4.56e-20,39;CL:0000211,4.56e-20,39;CL:0002319,1.28e-17,43;CL:0000221,4.45e-17,44;CL:0000133,4.45e-17,44;CL:0002609,5.57e-10,6;CL:0002321,1.58e-08,70;CL:0000120,7.82e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.14e-25!73;UBERON:0005743!1.14e-25!73;UBERON:0000073!3.88e-25!75;UBERON:0001016!3.88e-25!75;UBERON:0002020!6.92e-24!34;UBERON:0001049!1.05e-23!52;UBERON:0005068!1.05e-23!52;UBERON:0006241!1.05e-23!52;UBERON:0007135!1.05e-23!52;UBERON:0000955!3.06e-22!50;UBERON:0006238!3.06e-22!50;UBERON:0002346!7.97e-22!71;UBERON:0003075!7.97e-22!71;UBERON:0007284!7.97e-22!71;UBERON:0004121!1.22e-21!102;UBERON:0000924!1.22e-21!102;UBERON:0006601!1.22e-21!102;UBERON:0002616!1.78e-21!49;UBERON:0000033!1.84e-21!63;UBERON:0003056!2.76e-20!49;UBERON:0002791!1.75e-19!29;UBERON:0003528!1.75e-19!29;UBERON:0001893!1.75e-19!29;UBERON:0003080!2.22e-18!40;UBERON:0002780!1.00e-17!39;UBERON:0001890!1.00e-17!39;UBERON:0006240!1.00e-17!39;UBERON:0000956!1.39e-13!21;UBERON:0001869!1.39e-13!21;UBERON:0000203!1.39e-13!21;UBERON:0007811!2.15e-13!86;UBERON:0000153!2.42e-12!94;UBERON:0002619!5.96e-11!17;UBERON:0002021!6.95e-10!10;UBERON:0000411!6.95e-10!10;UBERON:0001950!6.95e-10!10;UBERON:0002420!4.03e-07!8;UBERON:0007245!4.03e-07!8;UBERON:0010009!4.03e-07!8;UBERON:0010011!4.03e-07!8;UBERON:0000454!4.03e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.93e-51,34;UBERON:0000073,4.16e-50,54;UBERON:0001049,6.76e-44,52;UBERON:0005068,6.76e-44,52;UBERON:0006241,6.76e-44,52;UBERON:0007135,6.76e-44,52;UBERON:0001017,1.34e-43,73;UBERON:0001016,3.69e-42,75;UBERON:0003528,2.00e-41,29;UBERON:0002791,2.00e-41,29;UBERON:0001893,2.00e-41,29;UBERON:0000955,1.22e-37,47;UBERON:0006238,1.22e-37,47;UBERON:0002616,4.47e-36,46;UBERON:0002346,8.34e-36,64;UBERON:0003075,8.34e-36,64;UBERON:0007284,8.34e-36,64;UBERON:0003080,2.25e-35,40;UBERON:0002780,5.52e-34,39;UBERON:0001890,5.52e-34,39;UBERON:0006240,5.52e-34,39;UBERON:0004121,1.12e-32,95;UBERON:0000924,1.12e-32,95;UBERON:0006601,1.12e-32,95;UBERON:0010371,3.43e-30,73;UBERON:0003056,2.46e-29,49;UBERON:0000956,1.08e-28,21;UBERON:0001869,1.08e-28,21;UBERON:0000203,1.08e-28,21;UBERON:0002619,4.91e-23,17;UBERON:0010314,5.98e-22,92;UBERON:0002021,2.62e-19,10;UBERON:0000411,2.62e-19,10;UBERON:0001950,2.62e-19,10;UBERON:0000025,7.88e-15,114;UBERON:0002420,1.99e-13,8;UBERON:0007245,1.99e-13,8;UBERON:0010009,1.99e-13,8;UBERON:0010011,1.99e-13,8;UBERON:0000454,1.99e-13,8;UBERON:0004111,3.07e-13,122;UBERON:0001948,2.69e-10,5;UBERON:0002315,2.69e-10,5;UBERON:0011216,8.24e-10,194;UBERON:0000369,1.67e-09,5;UBERON:0002435,1.67e-09,5;UBERON:0000204,1.67e-09,5;UBERON:0010082,1.67e-09,5;UBERON:0003076,1.49e-08,12;UBERON:0003057,1.49e-08,12;UBERON:0002240,1.74e-08,6;UBERON:0005174,1.74e-08,6;UBERON:0001137,1.74e-08,6;UBERON:0000483,9.28e-08,174;UBERON:0000119,1.46e-07,176;UBERON:0002950,8.35e-07,4;UBERON:0001891,8.35e-07,4;UBERON:0009616,8.35e-07,4;UBERON:0010286,8.35e-07,4
|phase1_expression=0,0,0,0,0,0,0,0,0.422366166455,0.234064526321993,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0.279972843250725,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0,0,5.26022798234954,5.81890077199236,7.60597684207415,0,0,0,0,0.7104801149461,0,0,1.65903379693564,3.37514845829227,2.94454945891935,5.71301968807607,8.1721360152097,2.44981598429908,2.1086003624012,7.35375029288017,3.30347642998166,4.97980618532232,6.14426133024974,5.67111037239834,5.85520919055422,5.2091337055676,1.3959149950069,3.37657566019008,2.59757021220577,9.72274332063103,5.26775218956681,4.28718725398191,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0,0,0,0,1.17112318804619,1.25668024088073,0,0,0,0,2.24685959107234,2.74500361691176,4.77486538028885,2.9550134432687,2.04572365864264,5.194701113989,3.89379031362618,0,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0.180062129805349,0.60281927134286,0.476255494059295,0.384341160854549,0.281105173679186,1.29351685369508,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,2.94405927989778,4.11618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0,0,0.963303539926752,1.17211686592203,0.327869890753351,0,0,0,0.430846795465598,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.790575555893047,4.4984984299053,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0.276399947608848,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,6.7770221114048,6.44455331110048,8.59343270159095,8.248952752497,6.85082519770642,6.7985450765073,4.72515750162264,4.95353323546643,4.98456649882625,9.31968561153276,0,0,0.341467211508268,0.243106717068294,0,1.47074806760011,0.888986911206461,0,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.749132059759059,0.320125762024346,0.631790158511746,0.476293691283074,0.695305955669133,0.38581844092741,0,0.441596760403192,0,0.354951612318675,0.953744759789284,0.290692833264657,0.941093804153306,0.338458431566706,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,0.949080144993393,0.689531376628944,0.409231043169689,0.929621047115796,0.192906610981141,1.24905288968973,0.467863216890817,0,0.382576664137687,0,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0,0.422366166455,0.234064526321993,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0.279972843250725,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0,0,5.26022798234954,5.81890077199236,7.60597684207415,0,0,0,0,0.7104801149461,0,0,1.65903379693564,3.37514845829227,2.94454945891935,5.71301968807607,8.1721360152097,2.44981598429908,2.1086003624012,7.35375029288017,3.30347642998166,4.97980618532232,6.14426133024974,5.67111037239834,5.85520919055422,5.2091337055676,1.3959149950069,3.37657566019008,2.59757021220577,9.72274332063103,5.26775218956681,4.28718725398191,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0,0,0,0,1.17112318804619,1.25668024088073,0,0,0,0,2.24685959107234,2.74500361691176,4.77486538028885,2.9550134432687,2.04572365864264,5.194701113989,3.89379031362618,0,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0.180062129805349,0.60281927134286,0.476255494059295,0.384341160854549,0.281105173679186,1.29351685369508,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,2.94405927989778,4.11618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0,0,0.963303539926752,1.17211686592203,0.327869890753351,0,0,0,0.430846795465598,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.790575555893047,4.4984984299053,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0.276399947608848,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,6.7770221114048,6.44455331110048,8.59343270159095,8.248952752497,6.85082519770642,6.7985450765073,4.72515750162264,4.95353323546643,4.98456649882625,9.31968561153276,0,0,0.341467211508268,0.243106717068294,0,1.47074806760011,0.888986911206461,0,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.749132059759059,0.320125762024346,0.631790158511746,0.476293691283074,0.695305955669133,0.38581844092741,0,0.441596760403192,0,0.354951612318675,0.953744759789284,0.290692833264657,0.941093804153306,0.338458431566706,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,0.949080144993393,0.689531376628944,0.409231043169689,0.929621047115796,0.192906610981141,1.24905288968973,0.467863216890817,0,0.382576664137687,0,0.463735671240843
|short_description=p2@Cdk5r1
}}
}}

Latest revision as of 19:18, 25 September 2015

Short description:p2@Cdk5r1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cdk5r1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 290bp_to_ENSMUST00000053413, NM_009871, uc011yat.1_5end
EntrezGene:Cdk5r1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cdk5r1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G14.12
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter5.93e-5134
regional part of nervous system4.16e-5054
neural tube6.76e-4452
neural rod6.76e-4452
future spinal cord6.76e-4452
neural keel6.76e-4452
central nervous system1.34e-4373
nervous system3.69e-4275
brain grey matter2.00e-4129
regional part of telencephalon2.00e-4129
telencephalon2.00e-4129
brain1.22e-3747
future brain1.22e-3747
regional part of brain4.47e-3646
neurectoderm8.34e-3664
neural plate8.34e-3664
presumptive neural plate8.34e-3664
anterior neural tube2.25e-3540
regional part of forebrain5.52e-3439
forebrain5.52e-3439
future forebrain5.52e-3439
ectoderm-derived structure1.12e-3295
ectoderm1.12e-3295
presumptive ectoderm1.12e-3295
ecto-epithelium3.43e-3073
pre-chordal neural plate2.46e-2949
cerebral cortex1.08e-2821
cerebral hemisphere1.08e-2821
pallium1.08e-2821
regional part of cerebral cortex4.91e-2317
structure with developmental contribution from neural crest5.98e-2292
occipital lobe2.62e-1910
visual cortex2.62e-1910
neocortex2.62e-1910
tube7.88e-15114
basal ganglion1.99e-138
nuclear complex of neuraxis1.99e-138
aggregate regional part of brain1.99e-138
collection of basal ganglia1.99e-138
cerebral subcortex1.99e-138
anatomical conduit3.07e-13122
regional part of spinal cord2.69e-105
gray matter of spinal cord2.69e-105
organ system subdivision8.24e-10194
corpus striatum1.67e-095
striatum1.67e-095
ventral part of telencephalon1.67e-095
future corpus striatum1.67e-095
posterior neural tube1.49e-0812
chordal neural plate1.49e-0812
spinal cord1.74e-086
dorsal region element1.74e-086
dorsum1.74e-086
epithelium9.28e-08174
cell layer1.46e-07176
regional part of midbrain8.35e-074
midbrain8.35e-074
presumptive midbrain8.35e-074
midbrain neural tube8.35e-074
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