FFCP PHASE1:Mm9::chr2:132771471..132771487,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:132771471..132771487,-
|short_description=p8@Fermt1
|description=CAGE_peak_8_at_Fermt1_5end
|association_with_transcript=-106bp_to_ENSMUST00000134937_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=241639 | |EntrezGene=241639 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1051 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-106bp_to_ENSMUST00000134937_5end | |||
|cluster_id=chr2:132771471..132771487,- | |||
|description=CAGE_peak_8_at_Fermt1_5end | |||
|id=chr2:132771471..132771487,- | |||
|ontology_enrichment_celltype=CL:0002563!8.07e-09!9;CL:0002251!8.07e-09!9;CL:0002076!1.73e-08!15;CL:0000066!6.30e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.55e-18,15;CL:0002563,3.35e-17,9;CL:0002251,3.35e-17,9;CL:0000066,1.61e-13,25;CL:0000223,5.24e-13,20;CL:0000239,2.36e-12,6;CL:0000677,2.36e-12,6;CL:0000584,2.36e-12,6;CL:0000075,1.81e-10,7;CL:0000068,5.25e-08,3;CL:0002202,5.25e-08,3;CL:0000069,5.25e-08,3;CL:0002632,5.25e-08,3;CL:0002368,5.25e-08,3;CL:0000307,5.25e-08,3;CL:0000377,5.25e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.18e-29!59;UBERON:0000160!2.84e-27!43;UBERON:0001007!7.11e-17!128;UBERON:0001555!7.11e-17!128;UBERON:0007026!7.11e-17!128;UBERON:0004119!3.07e-16!130;UBERON:0000925!3.07e-16!130;UBERON:0006595!3.07e-16!130;UBERON:0004921!1.09e-15!126;UBERON:0004185!1.09e-15!126;UBERON:0000344!1.73e-13!15;UBERON:0001242!3.95e-12!13;UBERON:0000060!3.95e-12!13;UBERON:0001262!3.95e-12!13;UBERON:0004786!3.95e-12!13;UBERON:0003350!8.07e-09!9;UBERON:0004808!8.07e-09!9;UBERON:0001277!8.07e-09!9;UBERON:0002108!1.27e-07!16;UBERON:0004923!4.53e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.17e-42,31;UBERON:0005409,6.45e-38,47;UBERON:0000344,2.77e-27,15;UBERON:0001242,2.40e-24,13;UBERON:0001262,2.40e-24,13;UBERON:0004786,2.40e-24,13;UBERON:0003350,3.35e-17,9;UBERON:0004808,3.35e-17,9;UBERON:0001277,3.35e-17,9;UBERON:0001007,2.40e-16,116;UBERON:0001555,2.40e-16,116;UBERON:0007026,2.40e-16,116;UBERON:0004119,6.39e-16,118;UBERON:0000925,6.39e-16,118;UBERON:0006595,6.39e-16,118;UBERON:0004923,1.23e-15,24;UBERON:0004921,1.47e-14,114;UBERON:0000485,9.78e-14,11;UBERON:0002108,2.66e-08,4;UBERON:0003126,5.25e-08,3;UBERON:0001005,5.25e-08,3;UBERON:0007196,5.25e-08,3;UBERON:0001558,5.25e-08,3 | |||
|phase1_expression=0,3.83872948403297,3.18499467572675,2.72217790176147,1.00179145989269,3.69334398206158,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,1.27993938234725,1.83527424853736,0.57423196411502,1.7230479846363,2.58565479223067,3.04037471130198,2.52030129759931,1.99557459589774,0,0,0,2.88851619751275,1.32987716286794,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,10.6080610095495,10.1343946190039,9.60496445528088,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0.420883711772948,0,0,0,0,0,0,0,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.11560453330835,0.213288250535234,0,0.902072229254653,1.21010114774006,1.77902435075896,2.47293313946327,0.474529061544512,1.97638745668813,2.76468729680296,3.97912944082302,2.53453313254856,2.69645822596266,3.8904848977445,4.38110801159608,0.189667900953082,0,0,0,0.387904974335251,0.140271639780637,0.69560190836683,0.885660887877613,2.82597710114475,1.35736880313981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0.824850614862677,1.32745138339963,0.242780636154981,0.302323556964751,0.377210159511796,1.18120757152309,0,0.258428293168221,0.727067458955011,0.356497378384721,1.58018378967908,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.65954501176592,0.322928853391811,0.241251699712623,0,0,2.04036585640896,0,0,0.206386867963223,0,0,0,0,0,0,0,5.72802370809068,0.158167996790568,0.203319467126849,0.648032044930808,0.418176592028937,0.655087691238533,1.48350781023303,1.98368293740806,1.30877970992015,5.31421390496351,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.358053391334963,0.198681354781265,0,0.147689527174577,0,0.228620419965,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0.503653849092235,0,0.563047426353546,2.19781949120718,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.229741875822453,0,0.115884325944855,0.38581844092741,0.824171801606613,0.294397840268795,0,0.354951612318675,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0,0.467863216890817,0.429742108096597,0,0,0 | |phase1_expression=0,3.83872948403297,3.18499467572675,2.72217790176147,1.00179145989269,3.69334398206158,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,1.27993938234725,1.83527424853736,0.57423196411502,1.7230479846363,2.58565479223067,3.04037471130198,2.52030129759931,1.99557459589774,0,0,0,2.88851619751275,1.32987716286794,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,10.6080610095495,10.1343946190039,9.60496445528088,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0.420883711772948,0,0,0,0,0,0,0,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.11560453330835,0.213288250535234,0,0.902072229254653,1.21010114774006,1.77902435075896,2.47293313946327,0.474529061544512,1.97638745668813,2.76468729680296,3.97912944082302,2.53453313254856,2.69645822596266,3.8904848977445,4.38110801159608,0.189667900953082,0,0,0,0.387904974335251,0.140271639780637,0.69560190836683,0.885660887877613,2.82597710114475,1.35736880313981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0.824850614862677,1.32745138339963,0.242780636154981,0.302323556964751,0.377210159511796,1.18120757152309,0,0.258428293168221,0.727067458955011,0.356497378384721,1.58018378967908,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.65954501176592,0.322928853391811,0.241251699712623,0,0,2.04036585640896,0,0,0.206386867963223,0,0,0,0,0,0,0,5.72802370809068,0.158167996790568,0.203319467126849,0.648032044930808,0.418176592028937,0.655087691238533,1.48350781023303,1.98368293740806,1.30877970992015,5.31421390496351,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.358053391334963,0.198681354781265,0,0.147689527174577,0,0.228620419965,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0.503653849092235,0,0.563047426353546,2.19781949120718,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.229741875822453,0,0.115884325944855,0.38581844092741,0.824171801606613,0.294397840268795,0,0.354951612318675,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0,0.467863216890817,0.429742108096597,0,0,0 | ||
|short_description=p8@Fermt1 | |||
}} | }} |
Latest revision as of 19:01, 25 September 2015
Short description: | p8@Fermt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Fermt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1051 |
Association with transcript: | -106bp_to_ENSMUST00000134937_5end |
EntrezGene: | Fermt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.55e-18 | 15 |
intestinal epithelial cell | 3.35e-17 | 9 |
epithelial cell of alimentary canal | 3.35e-17 | 9 |
epithelial cell | 1.61e-13 | 25 |
endodermal cell | 5.24e-13 | 20 |
brush border epithelial cell | 2.36e-12 | 6 |
gut absorptive cell | 2.36e-12 | 6 |
enterocyte | 2.36e-12 | 6 |
columnar/cuboidal epithelial cell | 1.81e-10 | 7 |
duct epithelial cell | 5.25e-08 | 3 |
epithelial cell of tracheobronchial tree | 5.25e-08 | 3 |
branched duct epithelial cell | 5.25e-08 | 3 |
epithelial cell of lower respiratory tract | 5.25e-08 | 3 |
respiratory epithelial cell | 5.25e-08 | 3 |
tracheal epithelial cell | 5.25e-08 | 3 |
tracheoblast | 5.25e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.17e-42 | 31 |
gastrointestinal system | 6.45e-38 | 47 |
mucosa | 2.77e-27 | 15 |
intestinal mucosa | 2.40e-24 | 13 |
wall of intestine | 2.40e-24 | 13 |
gastrointestinal system mucosa | 2.40e-24 | 13 |
epithelium of mucosa | 3.35e-17 | 9 |
gastrointestinal system epithelium | 3.35e-17 | 9 |
intestinal epithelium | 3.35e-17 | 9 |
digestive system | 2.40e-16 | 116 |
digestive tract | 2.40e-16 | 116 |
primitive gut | 2.40e-16 | 116 |
endoderm-derived structure | 6.39e-16 | 118 |
endoderm | 6.39e-16 | 118 |
presumptive endoderm | 6.39e-16 | 118 |
organ component layer | 1.23e-15 | 24 |
subdivision of digestive tract | 1.47e-14 | 114 |
simple columnar epithelium | 9.78e-14 | 11 |
small intestine | 2.66e-08 | 4 |
trachea | 5.25e-08 | 3 |
respiratory airway | 5.25e-08 | 3 |
tracheobronchial tree | 5.25e-08 | 3 |
lower respiratory tract | 5.25e-08 | 3 |