Personal tools

FFCP PHASE1:Mm9::chr8:73905967..73905978,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr8:73905967..73905978,-
|DHSsupport=NA
|short_description=p4@Nr2f6
|DPIdataset=NA
|description=CAGE_peak_4_at_Nr2f6_5end
|association_with_transcript=-108bp_to_ENSMUST00000002466_5end
|EntrezGene=13864
|EntrezGene=13864
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=P43136
|UniProt=P43136
|association_with_transcript=-108bp_to_ENSMUST00000002466_5end
|cluster_id=chr8:73905967..73905978,-
|description=CAGE_peak_4_at_Nr2f6_5end
|id=chr8:73905967..73905978,-
|ontology_enrichment_celltype=CL:0000117!8.04e-16!23;CL:0000337!8.04e-16!23;CL:0000540!1.90e-14!33;CL:0000047!1.90e-14!33;CL:0000031!1.90e-14!33;CL:0000404!1.90e-14!33;CL:0000221!4.20e-12!44;CL:0000133!4.20e-12!44;CL:0002319!6.25e-12!43;CL:0000393!1.26e-10!39;CL:0000211!1.26e-10!39;CL:0000055!1.29e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.93e-34,23;CL:0000337,3.93e-34,23;CL:0000540,2.21e-24,33;CL:0000047,2.21e-24,33;CL:0000031,2.21e-24,33;CL:0000404,2.21e-24,33;CL:0000393,8.97e-20,39;CL:0000211,8.97e-20,39;CL:0002319,2.02e-17,43;CL:0000221,6.71e-17,44;CL:0000133,6.71e-17,44;CL:0002609,8.19e-09,6;CL:0002321,1.19e-08,70;CL:0000120,5.95e-08,3;CL:0002613,1.09e-07,3;CL:0002612,8.97e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.99e-22!73;UBERON:0005743!3.99e-22!73;UBERON:0000073!4.88e-21!75;UBERON:0001016!4.88e-21!75;UBERON:0004121!2.56e-18!102;UBERON:0000924!2.56e-18!102;UBERON:0006601!2.56e-18!102;UBERON:0002346!3.22e-18!71;UBERON:0003075!3.22e-18!71;UBERON:0007284!3.22e-18!71;UBERON:0000033!1.24e-17!63;UBERON:0001049!4.06e-17!52;UBERON:0005068!4.06e-17!52;UBERON:0006241!4.06e-17!52;UBERON:0007135!4.06e-17!52;UBERON:0000955!1.06e-15!50;UBERON:0006238!1.06e-15!50;UBERON:0002616!3.96e-15!49;UBERON:0003056!4.36e-15!49;UBERON:0003080!2.45e-12!40;UBERON:0002780!8.78e-12!39;UBERON:0001890!8.78e-12!39;UBERON:0006240!8.78e-12!39;UBERON:0002020!2.47e-11!34;UBERON:0000153!7.93e-11!94;UBERON:0007811!1.81e-10!86;UBERON:0002791!2.22e-08!29;UBERON:0003528!2.22e-08!29;UBERON:0001893!2.22e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.45e-33,54;UBERON:0001017,3.98e-32,73;UBERON:0001016,4.85e-31,75;UBERON:0002020,1.04e-30,34;UBERON:0001049,5.68e-30,52;UBERON:0005068,5.68e-30,52;UBERON:0006241,5.68e-30,52;UBERON:0007135,5.68e-30,52;UBERON:0002346,1.41e-26,64;UBERON:0003075,1.41e-26,64;UBERON:0007284,1.41e-26,64;UBERON:0003080,1.18e-24,40;UBERON:0004121,2.72e-24,95;UBERON:0000924,2.72e-24,95;UBERON:0006601,2.72e-24,95;UBERON:0000955,4.17e-24,47;UBERON:0006238,4.17e-24,47;UBERON:0002780,3.53e-23,39;UBERON:0001890,3.53e-23,39;UBERON:0006240,3.53e-23,39;UBERON:0002616,1.03e-22,46;UBERON:0010371,2.48e-22,73;UBERON:0003528,5.42e-22,29;UBERON:0002791,5.42e-22,29;UBERON:0001893,5.42e-22,29;UBERON:0003056,6.88e-21,49;UBERON:0010314,4.18e-16,92;UBERON:0000956,8.72e-14,21;UBERON:0001869,8.72e-14,21;UBERON:0000203,8.72e-14,21;UBERON:0001948,6.87e-11,5;UBERON:0002315,6.87e-11,5;UBERON:0000025,1.47e-10,114;UBERON:0002420,1.15e-09,8;UBERON:0007245,1.15e-09,8;UBERON:0010009,1.15e-09,8;UBERON:0010011,1.15e-09,8;UBERON:0000454,1.15e-09,8;UBERON:0004111,2.21e-09,122;UBERON:0002240,5.36e-09,6;UBERON:0005174,5.36e-09,6;UBERON:0001137,5.36e-09,6;UBERON:0002619,2.14e-08,17;UBERON:0000369,1.73e-07,5;UBERON:0002435,1.73e-07,5;UBERON:0000204,1.73e-07,5;UBERON:0010082,1.73e-07,5;UBERON:0002257,8.97e-07,3
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0.315462165358238,0,0.42438965179803,0.0850432901510698,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.65407546914134,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0,3.23706337375356,2.11596391708813,3.80298842103708,0.677689064138264,0,0.449949858640699,0,0,0.898800331555214,0.768436610643109,2.28117147078651,1.35005938331691,1.26194976810829,2.28520787523043,2.20868540951614,1.71487118900936,0.766763768145891,1.83843757322004,1.10115880999389,1.40456071893706,0.921639199537461,2.50583946687368,2.19570344645783,2.08365348222704,1.3959149950069,2.25105044012672,0.763991238884051,1.17851434189467,1.42371680799103,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0.878342391034642,1.46612694769419,0,0.359445373517761,0,0.127070227073065,1.3481157546434,1.37250180845588,0.628271760564322,1.04294592115366,0.511430914660661,0.83115217823824,0.973447578406546,0.509196819251581,0.248813941220186,1.26361379216837,0.420883711772948,0.650602214813519,1.37941262660084,0.900310649026746,0.753524089178575,0.408218994907967,0.768682321709099,0.655912071918102,0.258703370739016,0.646703978798527,0.756424320671277,1.05570674498369,0.657587197282725,0.556094498451196,0,0,0.199034266818493,0,0.257347907114715,0,0,0.469052119962192,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0.536546802799238,0.116765342367169,0.329119699826961,0.164167464079095,0.405344047729279,0,0,0,1.26173969138476,1.23485534855141,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0,0,0,0,0.948339504765408,0.571242563048644,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0.491804836130026,0,0.94652465824877,0,1.07711698866399,0.477937595905104,0,0.566153061577665,0.809621403349789,0,0.395287777946524,1.28528526568723,0.567760340833074,0.890328018336276,0.81443479676788,0,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.720244376125241,1.29358683782755,0.643011105094777,1.24138163549592,0.891844088010353,1.64549020602121,1.522324745573,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0.741701208042039,0,0.412773735926445,0,0,0,0,0,0,0.276399947608848,0,0.474503990371703,0.203319467126849,0.216010681643603,0.627264888043406,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.598066184175915,0.330916980914195,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,0.314578033277133,0.724752362478018,0,0,0.405450430580328,0.410843828659309,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,2.25900737046827,0,0,1.03111909406213,2.74033007908257,0,0,1.35096360967266,1.81256963593682,0,0.31136204275253,0.399024873401031,1.36586884603307,0.729320151204882,0.419226325255965,0.551530525350042,1.11123363900808,0.412070114477788,0.320919209591815,0,0.25347929989024,0.377252682772152,0.842773567228942,0.512201219238954,0.631790158511746,0.476293691283074,0.115884325944855,0.964546102318525,1.23625770240992,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.726732083161643,0.282328141245992,0.507687647350059,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0,0.309873682371932,0.192906610981141,0.249810577937946,0.935726433781634,1.07435527024149,0.57386499620653,1.10295709559758,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0.315462165358238,0,0.42438965179803,0.0850432901510698,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.65407546914134,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0,3.23706337375356,2.11596391708813,3.80298842103708,0.677689064138264,0,0.449949858640699,0,0,0.898800331555214,0.768436610643109,2.28117147078651,1.35005938331691,1.26194976810829,2.28520787523043,2.20868540951614,1.71487118900936,0.766763768145891,1.83843757322004,1.10115880999389,1.40456071893706,0.921639199537461,2.50583946687368,2.19570344645783,2.08365348222704,1.3959149950069,2.25105044012672,0.763991238884051,1.17851434189467,1.42371680799103,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0.878342391034642,1.46612694769419,0,0.359445373517761,0,0.127070227073065,1.3481157546434,1.37250180845588,0.628271760564322,1.04294592115366,0.511430914660661,0.83115217823824,0.973447578406546,0.509196819251581,0.248813941220186,1.26361379216837,0.420883711772948,0.650602214813519,1.37941262660084,0.900310649026746,0.753524089178575,0.408218994907967,0.768682321709099,0.655912071918102,0.258703370739016,0.646703978798527,0.756424320671277,1.05570674498369,0.657587197282725,0.556094498451196,0,0,0.199034266818493,0,0.257347907114715,0,0,0.469052119962192,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0.536546802799238,0.116765342367169,0.329119699826961,0.164167464079095,0.405344047729279,0,0,0,1.26173969138476,1.23485534855141,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0,0,0,0,0.948339504765408,0.571242563048644,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0.491804836130026,0,0.94652465824877,0,1.07711698866399,0.477937595905104,0,0.566153061577665,0.809621403349789,0,0.395287777946524,1.28528526568723,0.567760340833074,0.890328018336276,0.81443479676788,0,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.720244376125241,1.29358683782755,0.643011105094777,1.24138163549592,0.891844088010353,1.64549020602121,1.522324745573,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0.741701208042039,0,0.412773735926445,0,0,0,0,0,0,0.276399947608848,0,0.474503990371703,0.203319467126849,0.216010681643603,0.627264888043406,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.598066184175915,0.330916980914195,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,0.314578033277133,0.724752362478018,0,0,0.405450430580328,0.410843828659309,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,2.25900737046827,0,0,1.03111909406213,2.74033007908257,0,0,1.35096360967266,1.81256963593682,0,0.31136204275253,0.399024873401031,1.36586884603307,0.729320151204882,0.419226325255965,0.551530525350042,1.11123363900808,0.412070114477788,0.320919209591815,0,0.25347929989024,0.377252682772152,0.842773567228942,0.512201219238954,0.631790158511746,0.476293691283074,0.115884325944855,0.964546102318525,1.23625770240992,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.726732083161643,0.282328141245992,0.507687647350059,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0,0.309873682371932,0.192906610981141,0.249810577937946,0.935726433781634,1.07435527024149,0.57386499620653,1.10295709559758,0.231867835620421
|short_description=p4@Nr2f6
}}
}}

Latest revision as of 18:12, 25 September 2015

Short description:p4@Nr2f6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Nr2f6_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -108bp_to_ENSMUST00000002466_5end
EntrezGene:Nr2f6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Nr2f6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.45e-3354
central nervous system3.98e-3273
nervous system4.85e-3175
gray matter1.04e-3034
neural tube5.68e-3052
neural rod5.68e-3052
future spinal cord5.68e-3052
neural keel5.68e-3052
neurectoderm1.41e-2664
neural plate1.41e-2664
presumptive neural plate1.41e-2664
anterior neural tube1.18e-2440
ectoderm-derived structure2.72e-2495
ectoderm2.72e-2495
presumptive ectoderm2.72e-2495
brain4.17e-2447
future brain4.17e-2447
regional part of forebrain3.53e-2339
forebrain3.53e-2339
future forebrain3.53e-2339
regional part of brain1.03e-2246
ecto-epithelium2.48e-2273
brain grey matter5.42e-2229
regional part of telencephalon5.42e-2229
telencephalon5.42e-2229
pre-chordal neural plate6.88e-2149
structure with developmental contribution from neural crest4.18e-1692
cerebral cortex8.72e-1421
cerebral hemisphere8.72e-1421
pallium8.72e-1421
regional part of spinal cord6.87e-115
gray matter of spinal cord6.87e-115
tube1.47e-10114
basal ganglion1.15e-098
nuclear complex of neuraxis1.15e-098
aggregate regional part of brain1.15e-098
collection of basal ganglia1.15e-098
cerebral subcortex1.15e-098
anatomical conduit2.21e-09122
spinal cord5.36e-096
dorsal region element5.36e-096
dorsum5.36e-096
regional part of cerebral cortex2.14e-0817
corpus striatum1.73e-075
striatum1.73e-075
ventral part of telencephalon1.73e-075
future corpus striatum1.73e-075
ventral horn of spinal cord8.97e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:73905967..73905978,-&oldid=4206303"