FFCP PHASE1:Mm9::chr10:12684247..12684278,-: Difference between revisions
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{{FFCP|EntrezGene=74732|HGNC=|MCL_coexpression_id=589|UniProt=Q3U5V8,Q9D3G5|association_with_transcript=-182bp_to_ENSMUST00000042861,ENSMUST00000163425,NM_001163590,NM_001163591,NM_029075,uc007ekg.2,uc007ekh.2,uc011xae.1_5end|description=CAGE_peak_3_at_Stx11_5end|id=chr10:12684247..12684278,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,2.04e-11,32;CL:0002032,2.04e-11,32;CL:0000037,2.04e-11,32;CL:0000837,2.04e-11,32;CL:0000791,1.53e-08,9;CL:0000789,1.53e-08,9;CL:0002420,1.53e-08,9;CL:0002419,1.53e-08,9;CL:0000790,1.53e-08,9;CL:0000624,1.06e-07,8;CL:0002320,1.50e-07,46;CL:0000134,1.50e-07,46;CL:0000838,1.56e-07,12;CL:0000542,7.90e-07,13;CL:0000051,7.90e-07,13;CL:0000084,9.66e-07,11;CL:0000827,9.66e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.72e-12!48;UBERON:0003081!6.59e-11!88;UBERON:0002390!1.07e-10!45;UBERON:0003061!1.07e-10!45;UBERON:0004177!1.92e-10!29;UBERON:0006562!2.24e-10!24;UBERON:0001557!2.24e-10!24;UBERON:0001042!2.24e-10!24;UBERON:0008814!2.24e-10!24;UBERON:0009145!2.24e-10!24;UBERON:0003408!2.78e-10!24;UBERON:0002370!5.34e-10!23;UBERON:0000974!5.34e-10!23;UBERON:0004807!5.34e-10!23;UBERON:0005058!5.34e-10!23;UBERON:0003351!5.34e-10!23;UBERON:0009113!5.34e-10!23;UBERON:0003295!5.34e-10!23;UBERON:0009722!5.34e-10!23;UBERON:0005562!5.34e-10!23;UBERON:0007690!5.34e-10!23;UBERON:0000072!1.97e-09!27;UBERON:0001004!1.32e-07!42;UBERON:0000065!2.48e-07!41;UBERON:0000063!4.82e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.47e-19,48;UBERON:0002405,1.47e-19,48;UBERON:0002390,5.20e-16,45;UBERON:0003061,5.20e-16,45;UBERON:0002370,1.76e-15,23;UBERON:0000974,1.76e-15,23;UBERON:0004807,1.76e-15,23;UBERON:0005058,1.76e-15,23;UBERON:0003351,1.76e-15,23;UBERON:0009113,1.76e-15,23;UBERON:0003295,1.76e-15,23;UBERON:0009722,1.76e-15,23;UBERON:0005562,1.76e-15,23;UBERON:0007690,1.76e-15,23;UBERON:0006562,1.22e-14,24;UBERON:0003408,1.22e-14,24;UBERON:0001557,1.22e-14,24;UBERON:0001042,1.22e-14,24;UBERON:0008814,1.22e-14,24;UBERON:0009145,1.22e-14,24;UBERON:0004177,2.40e-14,29;UBERON:0005057,2.40e-14,29;UBERON:0000077,7.25e-14,35;UBERON:0000072,1.67e-12,27;UBERON:0000490,1.14e-08,66;UBERON:0003081,1.18e-08,87;UBERON:0000065,1.36e-08,41;UBERON:0003929,1.44e-08,55;UBERON:0007811,2.80e-08,36;UBERON:0001004,2.82e-08,42;UBERON:0002384,1.50e-07,46;UBERON:0005911,4.88e-07,69|phase1_expression=0.160148847104794,25.126229350034,30.0299497997094,0,0,22.9994602519289,22.660426137766,4.9066862907799,24.919603820845,36.280001579909,9.93064215707929,13.4017227112165,0.342401459862411,0.611942816932982,0.666219523631325,0.404950534779652,0,1.73504190947031,1.37114433605739,1.27316895539409,0.595303031057488,0,0,11.0394771727451,15.3704218315004,21.2465826722557,32.3071497119306,24.1327780608196,0.190023419456374,0.252030129759931,7.98229838359097,0,0.61506478758457,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0.683045484958446,0,1.51076181570693,2.53442328048786,2.38610777810186,0.782391344348039,0.218025156380447,0,0,0.279972843250725,0,1.00669563634642,5.07753499407941,1.00828139742739,0.257259436035947,0.573066879877513,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.263772575460388,0,0.52091337055676,0,0,0,0,0.142371680799103,0,0.37863096666592,0.0755715601067855,4.63783181922684,0,0,0.539703191637817,0,0,0.421333260395256,0.340860645156116,0.259786004602869,0,0,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0,0.5709193985953,6.21450920753212,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,0,0,0,7.54835284387298,2.39961092397363,4.44745794755726,0,0,0.251308704225729,0,0,0,0,0.305518091550949,0.622034853050465,0,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0.189106080167819,0.351902248327898,0.657587197282725,0,0,0.411564272815887,0.199034266818493,3.51106593656617,2.05878325691772,3.12579849335152,0,0,0,0,0,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0.658239399653922,0.656669856316381,0.162137619091711,0.292399974850665,1.3173006917463,0.805238512562231,0,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.252946148497029,0.147610147979602,0.156998727841375,0.370191491765402,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,1.10851914099963,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0.637819074629948,0.983179888294428,1.03610989119537,0.867894351489069,0,2.17562273527484,0.491764273019036,0.827810238914197,0,0,0.163934945376675,0.504941854408746,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,1.15479086080775,0,0,0.302323556964751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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74732 | |||
|HGNC= | |||
|MCL_coexpression_id=589 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U5V8,Q9D3G5 | |||
|association_with_transcript=-182bp_to_ENSMUST00000042861,ENSMUST00000163425,NM_001163590,NM_001163591,NM_029075,uc007ekg.2,uc007ekh.2,uc011xae.1_5end | |||
|cluster_id=chr10:12684247..12684278,- | |||
|description=CAGE_peak_3_at_Stx11_5end | |||
|id=chr10:12684247..12684278,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.04e-11,32;CL:0002032,2.04e-11,32;CL:0000037,2.04e-11,32;CL:0000837,2.04e-11,32;CL:0000791,1.53e-08,9;CL:0000789,1.53e-08,9;CL:0002420,1.53e-08,9;CL:0002419,1.53e-08,9;CL:0000790,1.53e-08,9;CL:0000624,1.06e-07,8;CL:0002320,1.50e-07,46;CL:0000134,1.50e-07,46;CL:0000838,1.56e-07,12;CL:0000542,7.90e-07,13;CL:0000051,7.90e-07,13;CL:0000084,9.66e-07,11;CL:0000827,9.66e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.72e-12!48;UBERON:0003081!6.59e-11!88;UBERON:0002390!1.07e-10!45;UBERON:0003061!1.07e-10!45;UBERON:0004177!1.92e-10!29;UBERON:0006562!2.24e-10!24;UBERON:0001557!2.24e-10!24;UBERON:0001042!2.24e-10!24;UBERON:0008814!2.24e-10!24;UBERON:0009145!2.24e-10!24;UBERON:0003408!2.78e-10!24;UBERON:0002370!5.34e-10!23;UBERON:0000974!5.34e-10!23;UBERON:0004807!5.34e-10!23;UBERON:0005058!5.34e-10!23;UBERON:0003351!5.34e-10!23;UBERON:0009113!5.34e-10!23;UBERON:0003295!5.34e-10!23;UBERON:0009722!5.34e-10!23;UBERON:0005562!5.34e-10!23;UBERON:0007690!5.34e-10!23;UBERON:0000072!1.97e-09!27;UBERON:0001004!1.32e-07!42;UBERON:0000065!2.48e-07!41;UBERON:0000063!4.82e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.47e-19,48;UBERON:0002405,1.47e-19,48;UBERON:0002390,5.20e-16,45;UBERON:0003061,5.20e-16,45;UBERON:0002370,1.76e-15,23;UBERON:0000974,1.76e-15,23;UBERON:0004807,1.76e-15,23;UBERON:0005058,1.76e-15,23;UBERON:0003351,1.76e-15,23;UBERON:0009113,1.76e-15,23;UBERON:0003295,1.76e-15,23;UBERON:0009722,1.76e-15,23;UBERON:0005562,1.76e-15,23;UBERON:0007690,1.76e-15,23;UBERON:0006562,1.22e-14,24;UBERON:0003408,1.22e-14,24;UBERON:0001557,1.22e-14,24;UBERON:0001042,1.22e-14,24;UBERON:0008814,1.22e-14,24;UBERON:0009145,1.22e-14,24;UBERON:0004177,2.40e-14,29;UBERON:0005057,2.40e-14,29;UBERON:0000077,7.25e-14,35;UBERON:0000072,1.67e-12,27;UBERON:0000490,1.14e-08,66;UBERON:0003081,1.18e-08,87;UBERON:0000065,1.36e-08,41;UBERON:0003929,1.44e-08,55;UBERON:0007811,2.80e-08,36;UBERON:0001004,2.82e-08,42;UBERON:0002384,1.50e-07,46;UBERON:0005911,4.88e-07,69 | |||
|phase1_expression=0.160148847104794,25.126229350034,30.0299497997094,0,0,22.9994602519289,22.660426137766,4.9066862907799,24.919603820845,36.280001579909,9.93064215707929,13.4017227112165,0.342401459862411,0.611942816932982,0.666219523631325,0.404950534779652,0,1.73504190947031,1.37114433605739,1.27316895539409,0.595303031057488,0,0,11.0394771727451,15.3704218315004,21.2465826722557,32.3071497119306,24.1327780608196,0.190023419456374,0.252030129759931,7.98229838359097,0,0.61506478758457,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0.683045484958446,0,1.51076181570693,2.53442328048786,2.38610777810186,0.782391344348039,0.218025156380447,0,0,0.279972843250725,0,1.00669563634642,5.07753499407941,1.00828139742739,0.257259436035947,0.573066879877513,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.263772575460388,0,0.52091337055676,0,0,0,0,0.142371680799103,0,0.37863096666592,0.0755715601067855,4.63783181922684,0,0,0.539703191637817,0,0,0.421333260395256,0.340860645156116,0.259786004602869,0,0,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0,0.5709193985953,6.21450920753212,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,0,0,0,7.54835284387298,2.39961092397363,4.44745794755726,0,0,0.251308704225729,0,0,0,0,0.305518091550949,0.622034853050465,0,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0.189106080167819,0.351902248327898,0.657587197282725,0,0,0.411564272815887,0.199034266818493,3.51106593656617,2.05878325691772,3.12579849335152,0,0,0,0,0,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0.658239399653922,0.656669856316381,0.162137619091711,0.292399974850665,1.3173006917463,0.805238512562231,0,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.252946148497029,0.147610147979602,0.156998727841375,0.370191491765402,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,1.10851914099963,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0.637819074629948,0.983179888294428,1.03610989119537,0.867894351489069,0,2.17562273527484,0.491764273019036,0.827810238914197,0,0,0.163934945376675,0.504941854408746,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,1.15479086080775,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,0,0,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0.484393280087717,0,0.358117032009409,0.328281799490123,0,0.18542530201051,1.87957968877638,0,0.185194527369712,0.376736914009382,1.0935538217682,0.915112692826091,19.0375841593118,11.3360676382163,13.2671974852247,0.954670618015114,0.158167996790568,0,0,0.209088296014469,0,0,0.330613822901344,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0,1.89606672376907,0.810900861160657,2.05421914329655,2.46849563657811,2.50637373934474,1.78813219303138,3.4856680360791,2.36303243479324,0.706765149637033,1.600342939755,1.81487133246313,2.24153125701431,1.05833025804362,1.8700304349051,0.906921534460845,0,0,0.167884616364078,0,1.68914227906064,2.56412273974171,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.512200817262403,0.243106717068294,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0,0.192075457214608,0.229741875822453,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p3@Stx11 | |||
}} |
Latest revision as of 17:48, 25 September 2015
Short description: | p3@Stx11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Stx11_5end |
Coexpression cluster: | MCL_coexpression_mm9:589 |
Association with transcript: | -182bp_to_ENSMUST00000042861, ENSMUST00000163425, NM_001163590, NM_001163591, NM_029075, uc007ekg.2, uc007ekh.2, uc011xae.1_5end |
EntrezGene: | Stx11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.04e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.04e-11 | 32 |
hematopoietic stem cell | 2.04e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.04e-11 | 32 |
mature alpha-beta T cell | 1.53e-08 | 9 |
alpha-beta T cell | 1.53e-08 | 9 |
immature T cell | 1.53e-08 | 9 |
mature T cell | 1.53e-08 | 9 |
immature alpha-beta T cell | 1.53e-08 | 9 |
CD4-positive, alpha-beta T cell | 1.06e-07 | 8 |
connective tissue cell | 1.50e-07 | 46 |
mesenchymal cell | 1.50e-07 | 46 |
lymphoid lineage restricted progenitor cell | 1.56e-07 | 12 |
lymphocyte | 7.90e-07 | 13 |
common lymphoid progenitor | 7.90e-07 | 13 |
T cell | 9.66e-07 | 11 |
pro-T cell | 9.66e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.47e-19 | 48 |
immune system | 1.47e-19 | 48 |
hematopoietic system | 5.20e-16 | 45 |
blood island | 5.20e-16 | 45 |
thymus | 1.76e-15 | 23 |
neck | 1.76e-15 | 23 |
respiratory system epithelium | 1.76e-15 | 23 |
hemolymphoid system gland | 1.76e-15 | 23 |
pharyngeal epithelium | 1.76e-15 | 23 |
thymic region | 1.76e-15 | 23 |
pharyngeal gland | 1.76e-15 | 23 |
entire pharyngeal arch endoderm | 1.76e-15 | 23 |
thymus primordium | 1.76e-15 | 23 |
early pharyngeal endoderm | 1.76e-15 | 23 |
pharynx | 1.22e-14 | 24 |
gland of gut | 1.22e-14 | 24 |
upper respiratory tract | 1.22e-14 | 24 |
chordate pharynx | 1.22e-14 | 24 |
pharyngeal arch system | 1.22e-14 | 24 |
pharyngeal region of foregut | 1.22e-14 | 24 |
hemopoietic organ | 2.40e-14 | 29 |
immune organ | 2.40e-14 | 29 |
mixed endoderm/mesoderm-derived structure | 7.25e-14 | 35 |
segment of respiratory tract | 1.67e-12 | 27 |
unilaminar epithelium | 1.14e-08 | 66 |
lateral plate mesoderm | 1.18e-08 | 87 |
respiratory tract | 1.36e-08 | 41 |
gut epithelium | 1.44e-08 | 55 |
craniocervical region | 2.80e-08 | 36 |
respiratory system | 2.82e-08 | 42 |
connective tissue | 1.50e-07 | 46 |
endo-epithelium | 4.88e-07 | 69 |