FFCP PHASE1:Mm9::chr11:76822753..76822764,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15567 | |EntrezGene=15567 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q5NCR5 | |UniProt=Q5NCR5 | ||
|association_with_transcript=-13bp_to_ENSMUST00000129572_5end | |association_with_transcript=-13bp_to_ENSMUST00000129572_5end | ||
|cluster_id=chr11:76822753..76822764,+ | |||
|description=CAGE_peak_3_at_Slc6a4_5end | |description=CAGE_peak_3_at_Slc6a4_5end | ||
|id=chr11:76822753..76822764,+ | |id=chr11:76822753..76822764,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.29e-12!9;CL:0002251!1.29e-12!9;CL:0000239!2.19e-09!6;CL:0000677!2.19e-09!6;CL:0000212!2.19e-09!6;CL:0000584!2.19e-09!6;CL:0000075!7.18e-08!7;CL:0000066!2.80e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.92e-19,9;CL:0002251,2.92e-19,9;CL:0000239,4.34e-14,6;CL:0000677,4.34e-14,6;CL:0000584,4.34e-14,6;CL:0000075,5.81e-12,7;CL:0000066,6.33e-11,25;CL:0002076,7.54e-11,15;CL:0000682,5.34e-08,3;CL:0000223,1.04e-07,20;CL:0002250,9.07e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.75e-32!43;UBERON:0005409!2.81e-26!59;UBERON:0000344!8.93e-21!15;UBERON:0001242!4.44e-18!13;UBERON:0000060!4.44e-18!13;UBERON:0001262!4.44e-18!13;UBERON:0004786!4.44e-18!13;UBERON:0004923!3.49e-14!24;UBERON:0003350!1.29e-12!9;UBERON:0004808!1.29e-12!9;UBERON:0001277!1.29e-12!9;UBERON:0000485!6.89e-10!11;UBERON:0004119!1.08e-09!130;UBERON:0000925!1.08e-09!130;UBERON:0006595!1.08e-09!130;UBERON:0001007!2.23e-09!128;UBERON:0001555!2.23e-09!128;UBERON:0007026!2.23e-09!128;UBERON:0004921!3.89e-08!126;UBERON:0004185!3.89e-08!126;UBERON:0002108!5.33e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.05e-53,31;UBERON:0005409,9.71e-33,47;UBERON:0000344,2.26e-32,15;UBERON:0001242,4.91e-28,13;UBERON:0001262,4.91e-28,13;UBERON:0004786,4.91e-28,13;UBERON:0003350,2.92e-19,9;UBERON:0004808,2.92e-19,9;UBERON:0001277,2.92e-19,9;UBERON:0004923,7.87e-19,24;UBERON:0000485,1.95e-15,11;UBERON:0001007,2.33e-11,116;UBERON:0001555,2.33e-11,116;UBERON:0007026,2.33e-11,116;UBERON:0004119,4.77e-11,118;UBERON:0000925,4.77e-11,118;UBERON:0006595,4.77e-11,118;UBERON:0002108,2.37e-10,4;UBERON:0004921,1.44e-09,114;UBERON:0000331,3.48e-08,3;UBERON:0002116,3.48e-08,3;UBERON:0001204,3.48e-08,3;UBERON:0001168,3.48e-08,3 | |||
|phase1_expression=0,11.5161884520989,9.55498402718026,6.65421264875026,8.5152274090879,3.3575854382378,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,5.91971964335605,7.79991555628378,12.6331032105304,6.8921919385452,5.60225204983311,10.6413114895569,14.1136872665561,4.43461021310609,0,0,0,2.88851619751275,2.82598897109437,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,9.96282515313506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,14.0158800331678,0,0,1.41754207454303,3.63030344322017,3.7804267453628,1.90225626112559,3.32170343081158,5.92916237006439,3.2673577144035,4.57599885694647,4.09424582950152,7.19055526923377,6.91641759599022,5.77509692437665,0,0,1.1270773567308,0,0.387904974335251,0.140271639780637,0.442655759869801,0.738050739898011,1.09899109488962,1.72756029490521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,1.55056975900933,0.727067458955011,0.712994756769443,1.26414703174326,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,7.57850175237612,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.218362563746178,0,0.0826534557253359,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17230640686684,0,0.115884325944855,0.77163688185482,0,0,0,0,0.238436189947321,0.581385666529314,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.578719832943424,0,0,0.859484216193193,0,0,0.231867835620421 | |phase1_expression=0,11.5161884520989,9.55498402718026,6.65421264875026,8.5152274090879,3.3575854382378,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,5.91971964335605,7.79991555628378,12.6331032105304,6.8921919385452,5.60225204983311,10.6413114895569,14.1136872665561,4.43461021310609,0,0,0,2.88851619751275,2.82598897109437,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,9.96282515313506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,14.0158800331678,0,0,1.41754207454303,3.63030344322017,3.7804267453628,1.90225626112559,3.32170343081158,5.92916237006439,3.2673577144035,4.57599885694647,4.09424582950152,7.19055526923377,6.91641759599022,5.77509692437665,0,0,1.1270773567308,0,0.387904974335251,0.140271639780637,0.442655759869801,0.738050739898011,1.09899109488962,1.72756029490521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,1.55056975900933,0.727067458955011,0.712994756769443,1.26414703174326,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,7.57850175237612,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.218362563746178,0,0.0826534557253359,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17230640686684,0,0.115884325944855,0.77163688185482,0,0,0,0,0.238436189947321,0.581385666529314,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.578719832943424,0,0,0.859484216193193,0,0,0.231867835620421 | ||
|short_description=p3@Slc6a4 | |short_description=p3@Slc6a4 | ||
}} | }} |
Latest revision as of 17:11, 25 September 2015
Short description: | p3@Slc6a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc6a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -13bp_to_ENSMUST00000129572_5end |
EntrezGene: | Slc6a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.92e-19 | 9 |
epithelial cell of alimentary canal | 2.92e-19 | 9 |
brush border epithelial cell | 4.34e-14 | 6 |
gut absorptive cell | 4.34e-14 | 6 |
enterocyte | 4.34e-14 | 6 |
columnar/cuboidal epithelial cell | 5.81e-12 | 7 |
epithelial cell | 6.33e-11 | 25 |
endo-epithelial cell | 7.54e-11 | 15 |
M cell of gut | 5.34e-08 | 3 |
endodermal cell | 1.04e-07 | 20 |
intestinal crypt stem cell | 9.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.05e-53 | 31 |
gastrointestinal system | 9.71e-33 | 47 |
mucosa | 2.26e-32 | 15 |
intestinal mucosa | 4.91e-28 | 13 |
wall of intestine | 4.91e-28 | 13 |
gastrointestinal system mucosa | 4.91e-28 | 13 |
epithelium of mucosa | 2.92e-19 | 9 |
gastrointestinal system epithelium | 2.92e-19 | 9 |
intestinal epithelium | 2.92e-19 | 9 |
organ component layer | 7.87e-19 | 24 |
simple columnar epithelium | 1.95e-15 | 11 |
digestive system | 2.33e-11 | 116 |
digestive tract | 2.33e-11 | 116 |
primitive gut | 2.33e-11 | 116 |
endoderm-derived structure | 4.77e-11 | 118 |
endoderm | 4.77e-11 | 118 |
presumptive endoderm | 4.77e-11 | 118 |
small intestine | 2.37e-10 | 4 |
subdivision of digestive tract | 1.44e-09 | 114 |
ileal mucosa | 3.48e-08 | 3 |
ileum | 3.48e-08 | 3 |
mucosa of small intestine | 3.48e-08 | 3 |
wall of small intestine | 3.48e-08 | 3 |