FFCP PHASE1:Mm9::chr3:72771776..72771791,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69983 | |EntrezGene=69983 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=F8VQM5 | |UniProt=F8VQM5 | ||
|association_with_transcript=0bp_to_ENSMUST00000167334,ENSMUST00000170445,uc012cqn.1_5end | |association_with_transcript=0bp_to_ENSMUST00000167334,ENSMUST00000170445,uc012cqn.1_5end | ||
|cluster_id=chr3:72771776..72771791,- | |||
|description=CAGE_peak_1_at_Sis_5end | |description=CAGE_peak_1_at_Sis_5end | ||
|id=chr3:72771776..72771791,- | |id=chr3:72771776..72771791,- | ||
|ontology_enrichment_celltype=CL:0002563!9.78e-14!9;CL:0002251!9.78e-14!9;CL:0000239!3.91e-10!6;CL:0000677!3.91e-10!6;CL:0000212!3.91e-10!6;CL:0000584!3.91e-10!6;CL:0000075!1.63e-08!7;CL:0002076!2.52e-07!15;CL:0000066!5.69e-07!25 | |ontology_enrichment_celltype=CL:0002563!9.78e-14!9;CL:0002251!9.78e-14!9;CL:0000239!3.91e-10!6;CL:0000677!3.91e-10!6;CL:0000212!3.91e-10!6;CL:0000584!3.91e-10!6;CL:0000075!1.63e-08!7;CL:0002076!2.52e-07!15;CL:0000066!5.69e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.03e-21,9;CL:0002251,3.03e-21,9;CL:0000239,2.04e-15,6;CL:0000677,2.04e-15,6;CL:0000584,2.04e-15,6;CL:0000075,4.20e-13,7;CL:0000066,2.84e-12,25;CL:0002076,4.79e-12,15;CL:0000682,8.57e-09,3;CL:0000223,1.32e-08,20;CL:0002250,2.01e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.90e-26!43;UBERON:0000344!1.95e-22!15;UBERON:0005409!8.53e-22!59;UBERON:0001242!1.27e-19!13;UBERON:0000060!1.27e-19!13;UBERON:0001262!1.27e-19!13;UBERON:0004786!1.27e-19!13;UBERON:0003350!9.78e-14!9;UBERON:0004808!9.78e-14!9;UBERON:0001277!9.78e-14!9;UBERON:0001007!4.62e-13!128;UBERON:0001555!4.62e-13!128;UBERON:0007026!4.62e-13!128;UBERON:0004119!1.14e-12!130;UBERON:0000925!1.14e-12!130;UBERON:0006595!1.14e-12!130;UBERON:0004923!2.94e-12!24;UBERON:0004921!1.55e-11!126;UBERON:0004185!1.55e-11!126;UBERON:0000485!8.27e-11!11 | |ontology_enrichment_uberon=UBERON:0000160!5.90e-26!43;UBERON:0000344!1.95e-22!15;UBERON:0005409!8.53e-22!59;UBERON:0001242!1.27e-19!13;UBERON:0000060!1.27e-19!13;UBERON:0001262!1.27e-19!13;UBERON:0004786!1.27e-19!13;UBERON:0003350!9.78e-14!9;UBERON:0004808!9.78e-14!9;UBERON:0001277!9.78e-14!9;UBERON:0001007!4.62e-13!128;UBERON:0001555!4.62e-13!128;UBERON:0007026!4.62e-13!128;UBERON:0004119!1.14e-12!130;UBERON:0000925!1.14e-12!130;UBERON:0006595!1.14e-12!130;UBERON:0004923!2.94e-12!24;UBERON:0004921!1.55e-11!126;UBERON:0004185!1.55e-11!126;UBERON:0000485!8.27e-11!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.95e-56,31;UBERON:0005409,2.10e-37,47;UBERON:0000344,2.30e-35,15;UBERON:0001242,8.58e-31,13;UBERON:0001262,8.58e-31,13;UBERON:0004786,8.58e-31,13;UBERON:0003350,3.03e-21,9;UBERON:0004808,3.03e-21,9;UBERON:0001277,3.03e-21,9;UBERON:0004923,9.79e-21,24;UBERON:0000485,4.61e-17,11;UBERON:0001007,8.98e-15,116;UBERON:0001555,8.98e-15,116;UBERON:0007026,8.98e-15,116;UBERON:0004119,2.10e-14,118;UBERON:0000925,2.10e-14,118;UBERON:0006595,2.10e-14,118;UBERON:0004921,1.20e-12,114;UBERON:0002108,9.78e-11,4;UBERON:0000331,1.21e-08,3;UBERON:0002116,1.21e-08,3;UBERON:0001204,1.21e-08,3;UBERON:0001168,1.21e-08,3 | |||
|phase1_expression=0,2290.67457574477,2103.46148369783,3294.13772534269,3139.11353957376,455.456464696957,543.149389384597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1441.69172179139,1501.94256314676,2803.97468077364,2547.09568328861,1785.82557650065,3014.72154967537,3278.9119881767,553.217624084985,0,0,0,32.0625297923915,119.522710012756,38.9963470461125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,132.719977024506,0,0,0,0,0,0,0,0,0,0,808.307684531226,0,0,0,0,0,0,0,1.0053327306374,0,0,0,0,0,0,31.6865994070808,0,0,1784.1120735768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1789.21770985727,1204.83678171911,0,0,0.38660238396628,1.81515172161008,2.44615848229357,4.1849637744763,1610.07710582053,4.44687177754829,3.51869292320377,7.36138946552258,7.21367122340745,1272.72828265438,1212.96673589678,1770.76420177783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,891.639879250713,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0.218362563746178,0,0,0,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0.403865799792591,0.228620419965,0.403304740547362,2.0466154955348,0.384847366561318,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,2290.67457574477,2103.46148369783,3294.13772534269,3139.11353957376,455.456464696957,543.149389384597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1441.69172179139,1501.94256314676,2803.97468077364,2547.09568328861,1785.82557650065,3014.72154967537,3278.9119881767,553.217624084985,0,0,0,32.0625297923915,119.522710012756,38.9963470461125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,132.719977024506,0,0,0,0,0,0,0,0,0,0,808.307684531226,0,0,0,0,0,0,0,1.0053327306374,0,0,0,0,0,0,31.6865994070808,0,0,1784.1120735768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1789.21770985727,1204.83678171911,0,0,0.38660238396628,1.81515172161008,2.44615848229357,4.1849637744763,1610.07710582053,4.44687177754829,3.51869292320377,7.36138946552258,7.21367122340745,1272.72828265438,1212.96673589678,1770.76420177783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,891.639879250713,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0.218362563746178,0,0,0,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0.403865799792591,0.228620419965,0.403304740547362,2.0466154955348,0.384847366561318,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p1@Sis | |short_description=p1@Sis | ||
}} | }} |
Latest revision as of 16:41, 25 September 2015
Short description: | p1@Sis |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sis_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000167334, ENSMUST00000170445, uc012cqn.1_5end |
EntrezGene: | Sis |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.03e-21 | 9 |
epithelial cell of alimentary canal | 3.03e-21 | 9 |
brush border epithelial cell | 2.04e-15 | 6 |
gut absorptive cell | 2.04e-15 | 6 |
enterocyte | 2.04e-15 | 6 |
columnar/cuboidal epithelial cell | 4.20e-13 | 7 |
epithelial cell | 2.84e-12 | 25 |
endo-epithelial cell | 4.79e-12 | 15 |
M cell of gut | 8.57e-09 | 3 |
endodermal cell | 1.32e-08 | 20 |
intestinal crypt stem cell | 2.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.95e-56 | 31 |
gastrointestinal system | 2.10e-37 | 47 |
mucosa | 2.30e-35 | 15 |
intestinal mucosa | 8.58e-31 | 13 |
wall of intestine | 8.58e-31 | 13 |
gastrointestinal system mucosa | 8.58e-31 | 13 |
epithelium of mucosa | 3.03e-21 | 9 |
gastrointestinal system epithelium | 3.03e-21 | 9 |
intestinal epithelium | 3.03e-21 | 9 |
organ component layer | 9.79e-21 | 24 |
simple columnar epithelium | 4.61e-17 | 11 |
digestive system | 8.98e-15 | 116 |
digestive tract | 8.98e-15 | 116 |
primitive gut | 8.98e-15 | 116 |
endoderm-derived structure | 2.10e-14 | 118 |
endoderm | 2.10e-14 | 118 |
presumptive endoderm | 2.10e-14 | 118 |
subdivision of digestive tract | 1.20e-12 | 114 |
small intestine | 9.78e-11 | 4 |
ileal mucosa | 1.21e-08 | 3 |
ileum | 1.21e-08 | 3 |
mucosa of small intestine | 1.21e-08 | 3 |
wall of small intestine | 1.21e-08 | 3 |