FFCP PHASE1:Mm9::chr8:67653364..67653381,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:67653364..67653381,-
|short_description=p5@BC030870
|description=CAGE_peak_5_at_BC030870_5end
|association_with_transcript=54bp_to_NR_033217,uc009lvi.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=407795 | |EntrezGene=407795 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_NR_033217,uc009lvi.2_5end | |||
|cluster_id=chr8:67653364..67653381,- | |||
|description=CAGE_peak_5_at_BC030870_5end | |||
|id=chr8:67653364..67653381,- | |||
|ontology_enrichment_celltype=CL:0002563!1.08e-10!9;CL:0002251!1.08e-10!9;CL:0002076!8.40e-10!15;CL:0000066!5.63e-08!25;CL:0000239!1.91e-07!6;CL:0000677!1.91e-07!6;CL:0000212!1.91e-07!6;CL:0000584!1.91e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.11e-17,9;CL:0002251,1.11e-17,9;CL:0002076,3.69e-17,15;CL:0000066,2.10e-15,25;CL:0000223,3.48e-12,20;CL:0000239,5.89e-12,6;CL:0000677,5.89e-12,6;CL:0000584,5.89e-12,6;CL:0000075,3.86e-10,7;CL:0000682,1.70e-07,3;CL:0002250,2.63e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.73e-28!59;UBERON:0000160!8.48e-24!43;UBERON:0000344!1.39e-17!15;UBERON:0001242!2.37e-15!13;UBERON:0000060!2.37e-15!13;UBERON:0001262!2.37e-15!13;UBERON:0004786!2.37e-15!13;UBERON:0001007!1.47e-14!128;UBERON:0001555!1.47e-14!128;UBERON:0007026!1.47e-14!128;UBERON:0004119!4.53e-14!130;UBERON:0000925!4.53e-14!130;UBERON:0006595!4.53e-14!130;UBERON:0004921!3.99e-13!126;UBERON:0004185!3.99e-13!126;UBERON:0003350!1.08e-10!9;UBERON:0004808!1.08e-10!9;UBERON:0001277!1.08e-10!9;UBERON:0004923!4.97e-09!24;UBERON:0000485!2.90e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.41e-51,31;UBERON:0005409,3.56e-47,47;UBERON:0000344,6.96e-30,15;UBERON:0001242,6.26e-26,13;UBERON:0001262,6.26e-26,13;UBERON:0004786,6.26e-26,13;UBERON:0001007,2.30e-20,116;UBERON:0001555,2.30e-20,116;UBERON:0007026,2.30e-20,116;UBERON:0004119,7.20e-20,118;UBERON:0000925,7.20e-20,118;UBERON:0006595,7.20e-20,118;UBERON:0004921,5.00e-18,114;UBERON:0003350,1.11e-17,9;UBERON:0004808,1.11e-17,9;UBERON:0001277,1.11e-17,9;UBERON:0004923,3.26e-17,24;UBERON:0000485,3.95e-14,11;UBERON:0002108,5.91e-09,4;UBERON:0000331,1.54e-07,3;UBERON:0002116,1.54e-07,3;UBERON:0001204,1.54e-07,3;UBERON:0001168,1.54e-07,3;UBERON:0011216,5.25e-07,194 | |||
|phase1_expression=0,3.83872948403297,5.0049916332849,2.41971369045464,1.00179145989269,4.02910252588535,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,4.95976510659561,4.12936705920906,2.8711598205751,7.32295393470427,5.38678081714723,7.9809836171677,4.03248207615889,4.8780712344167,0,0,0,6.06588401477677,3.82339684324532,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,1.5154372870785,1.01343946190039,2.02209778005913,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,5.02456076660734,0.213288250535234,0,1.15980715189884,1.00841762311671,2.44615848229357,2.28270751335071,2.84717436926707,2.47048432086016,2.01068167040216,1.59165177632921,2.14460495831032,7.19055526923377,4.75503709724327,5.17767310461355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.664394068946325,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0,1.29214146584111,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0,0,0,0.164140899745061,1.1659233465194,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0.609958401380546,0.540026704109006,0.836353184057875,1.09181281873089,1.07891477107857,1.32245529160537,2.6175594198403,3.88844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.962757628775446,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.384150914429216,0.114870937911227,0,0,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,3.83872948403297,5.0049916332849,2.41971369045464,1.00179145989269,4.02910252588535,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,4.95976510659561,4.12936705920906,2.8711598205751,7.32295393470427,5.38678081714723,7.9809836171677,4.03248207615889,4.8780712344167,0,0,0,6.06588401477677,3.82339684324532,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,1.5154372870785,1.01343946190039,2.02209778005913,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,5.02456076660734,0.213288250535234,0,1.15980715189884,1.00841762311671,2.44615848229357,2.28270751335071,2.84717436926707,2.47048432086016,2.01068167040216,1.59165177632921,2.14460495831032,7.19055526923377,4.75503709724327,5.17767310461355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.664394068946325,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0,1.29214146584111,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0,0,0,0.164140899745061,1.1659233465194,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0.609958401380546,0.540026704109006,0.836353184057875,1.09181281873089,1.07891477107857,1.32245529160537,2.6175594198403,3.88844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.962757628775446,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.384150914429216,0.114870937911227,0,0,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0,0,0 | ||
|short_description=p5@BC030870 | |||
}} | }} |
Latest revision as of 16:17, 25 September 2015
Short description: | p5@BC030870 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_BC030870_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 54bp_to_NR_033217, uc009lvi.2_5end |
EntrezGene: | BC030870 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.11e-17 | 9 |
epithelial cell of alimentary canal | 1.11e-17 | 9 |
endo-epithelial cell | 3.69e-17 | 15 |
epithelial cell | 2.10e-15 | 25 |
endodermal cell | 3.48e-12 | 20 |
brush border epithelial cell | 5.89e-12 | 6 |
gut absorptive cell | 5.89e-12 | 6 |
enterocyte | 5.89e-12 | 6 |
columnar/cuboidal epithelial cell | 3.86e-10 | 7 |
M cell of gut | 1.70e-07 | 3 |
intestinal crypt stem cell | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.41e-51 | 31 |
gastrointestinal system | 3.56e-47 | 47 |
mucosa | 6.96e-30 | 15 |
intestinal mucosa | 6.26e-26 | 13 |
wall of intestine | 6.26e-26 | 13 |
gastrointestinal system mucosa | 6.26e-26 | 13 |
digestive system | 2.30e-20 | 116 |
digestive tract | 2.30e-20 | 116 |
primitive gut | 2.30e-20 | 116 |
endoderm-derived structure | 7.20e-20 | 118 |
endoderm | 7.20e-20 | 118 |
presumptive endoderm | 7.20e-20 | 118 |
subdivision of digestive tract | 5.00e-18 | 114 |
epithelium of mucosa | 1.11e-17 | 9 |
gastrointestinal system epithelium | 1.11e-17 | 9 |
intestinal epithelium | 1.11e-17 | 9 |
organ component layer | 3.26e-17 | 24 |
simple columnar epithelium | 3.95e-14 | 11 |
small intestine | 5.91e-09 | 4 |
ileal mucosa | 1.54e-07 | 3 |
ileum | 1.54e-07 | 3 |
mucosa of small intestine | 1.54e-07 | 3 |
wall of small intestine | 1.54e-07 | 3 |
organ system subdivision | 5.25e-07 | 194 |