FFCP PHASE1:Mm9::chr14:105657829..105657846,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr14:105657829..105657846,+ to FFCP PHASE1:Mm9::chr14:105657829..105657846,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76273 | |EntrezGene=76273 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q3V1V0,Q91ZP6 | |UniProt=Q3V1V0,Q91ZP6 | ||
|association_with_transcript=-43bp_to_NM_001190989,NM_029561,uc007uxp.2,uc007uxq.2,uc007uxr.2_5end | |||
|cluster_id=chr14:105657829..105657846,+ | |||
|description=CAGE_peak_3_at_Ndfip2_5end | |||
|id=chr14:105657829..105657846,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.28e-07,9;CL:0002251,1.28e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.84e-10!43;UBERON:0000344!5.93e-10!15;UBERON:0001242!1.23e-08!13;UBERON:0000060!1.23e-08!13;UBERON:0001262!1.23e-08!13;UBERON:0004786!1.23e-08!13;UBERON:0005409!2.35e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.51e-20,31;UBERON:0005409,4.59e-15,47;UBERON:0000344,1.02e-12,15;UBERON:0001242,5.68e-11,13;UBERON:0001262,5.68e-11,13;UBERON:0004786,5.68e-11,13;UBERON:0004119,1.21e-08,118;UBERON:0000925,1.21e-08,118;UBERON:0006595,1.21e-08,118;UBERON:0001007,2.51e-08,116;UBERON:0001555,2.51e-08,116;UBERON:0007026,2.51e-08,116;UBERON:0004923,4.62e-08,24;UBERON:0003350,1.28e-07,9;UBERON:0004808,1.28e-07,9;UBERON:0001277,1.28e-07,9;UBERON:0004921,2.21e-07,114 | |||
|phase1_expression=0.640595388419176,387.013727072051,429.064282744333,174.824314135348,288.01504471915,37.2691983644395,31.3040938398004,1.16210991097419,23.65250532148,29.7261948428932,0.171217968225505,0.717949430958028,0.856003649656029,0.262261207256992,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,0.510259740906419,0.794327609607082,0.783599367416806,88.1558249591671,146.133712039787,325.589523653216,136.120790786268,163.973608073962,61.9476347427779,63.0075324399827,60.3106988982429,0,1.23012957516914,0,2.02196133825892,3.15845826181135,4.90006455029686,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0.971020706062307,0.251793635951155,0.405507724878058,0.183546752161682,0.782391344348039,0,0.219686182734472,0,0.279972843250725,0,0.167782606057736,2.17608642603403,0,0.257259436035947,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,0.856952953211411,0.220868540951614,0,0.383381884072945,0,0,0.127687338085188,0.46081959976873,0.527545150920775,0.274462930807229,0,0.837548997004143,0,0.15279824777681,0.883885756421003,0.284743361598206,0.931997229126503,6.28527404665428,0.831287161174641,2.89864488701678,1.72084775396277,111.515298728071,0,0.649776417447669,0.448026887097336,4.63466586434781,0,0,0,0.985903938436763,0,0,0,1.73192832808971,1.52015919285059,1.01104889002957,14.1588010851634,0,0.593768556259299,0.173485326766136,0,0.461230994512117,0.301445281105245,0,0.125666591329675,6.67426412882809,0.289198713839823,0,0.323533699894818,0,0,41.0061874679869,0.292780797011547,0,59.5214938636018,0.599075622529601,0,0,0.449371918214468,5.03250663100489,0.251308704225729,3.65031072403781,3.83573185995496,0.83115217823824,0.648965052271031,0.101839363850316,0,0.505445516867349,0.210441855886474,0,0,0,0.452114453507145,0.204109497453984,0,0,0.517406741478031,0.215567992932842,0,0.351902248327898,0,0.278047249225598,3.48252166522167,3.08673204611915,0,0.702213187313235,0.51469581422943,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0.350296027101508,0.329119699826961,0,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,0.308713837137853,191.973312913587,48.9233548327557,0.213288250535234,0,2.06187938115349,6.05050573870028,5.11469500843202,7.98947629672748,45.5547899082731,11.0348299665087,8.79673230800943,6.96347652144028,9.74820435595601,33.2563181202062,66.1382432616564,65.5174789006868,0.758671603812327,0,0,0.610953983535943,0.193952487167626,1.61312385747733,0.69560190836683,0.295220295959204,0.31399745568275,1.72756029490521,0.592905254174298,0,0.196558995113203,0.224862112384854,1.01430060694251,3.13530307678142,5.60176873919124,6.32931502391783,2.59416362840057,5.21666685057355,5.75072826109418,6.32639611036456,4.99260276983297,1.26289438973556,3.58794827043824,3.37710464954357,0.184753190166605,0,0.162964976442026,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0.54390568381871,7.86822836830458,1.93155722413313,0.80275294993896,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0.566153061577665,0,0.876767573733936,0.395287777946524,0.321321316421807,0,0.534196811001766,0.488660878060728,0.494910368917606,0,1.94224508923985,1.81394134178851,1.50884063804718,1.47650946440386,0.307435147943927,5.16856586336442,0.363533729477506,0,0,0,0,2.04263763452273,0.540183282093931,0.129358683782755,0.428674070063185,3.54680467284547,1.78368817602071,1.48094118541909,0.608929898229199,1.40803024838226,1.0591603543191,0,14.5099902588502,8.7190790415789,5.36785031860587,9.07229814423837,13.1312719796049,20.6951394007194,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0,1.86976272993241,2.23922323717853,1.65839968565309,2.86401185404534,0,0.813277868507395,1.83609079397062,0.836353184057875,1.9652630737156,1.61837215661785,2.23164330458407,1.57053565190418,34.9960427887841,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0,0,0,0,0,0,0,0.948033361884535,0,0.102710957164827,0.129920822977795,0.537080087002444,0.198681354781265,0.360586348559907,0.147689527174577,0.201932899896295,0.304827226619999,0.201652370273681,0.487289403698762,0,0.116876902181569,2.72076460338254,6.21560669447381,20.9033285900078,5.20442310728643,0,1.50145980360946,0.36630324853453,5.14484109789758,0.501572104035363,7.90652579663893,7.36520378411483,9.16632821503035,7.56154002312225,3.42541259885321,2.2661816921691,6.07520250208625,2.2516060161211,2.26571204492102,4.14208249401456,0.31136204275253,0,0.341467211508268,0.486213434136588,0.419226325255965,1.65459157605013,1.55572709461131,0.412070114477788,1.92551525755089,0.758091635291392,1.01391719956096,0.943131706930381,1.31098110457835,1.34452820050225,1.09127391015665,1.90517476513229,1.62238056322798,0.77163688185482,1.23625770240992,0.735994600671987,0.685738504770831,1.77475806159337,1.43061713968393,1.0174249164263,1.2234219453993,1.01537529470012,1.28049581010941,2.367627402940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| |phase1_expression=0.640595388419176,387.013727072051,429.064282744333,174.824314135348,288.01504471915,37.2691983644395,31.3040938398004,1.16210991097419,23.65250532148,29.7261948428932,0.171217968225505,0.717949430958028,0.856003649656029,0.262261207256992,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,0.510259740906419,0.794327609607082,0.783599367416806,88.1558249591671,146.133712039787,325.589523653216,136.120790786268,163.973608073962,61.9476347427779,63.0075324399827,60.3106988982429,0,1.23012957516914,0,2.02196133825892,3.15845826181135,4.90006455029686,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0.971020706062307,0.251793635951155,0.405507724878058,0.183546752161682,0.782391344348039,0,0.219686182734472,0,0.279972843250725,0,0.167782606057736,2.17608642603403,0,0.257259436035947,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,0.856952953211411,0.220868540951614,0,0.383381884072945,0,0,0.127687338085188,0.46081959976873,0.527545150920775,0.274462930807229,0,0.837548997004143,0,0.15279824777681,0.883885756421003,0.284743361598206,0.931997229126503,6.28527404665428,0.831287161174641,2.89864488701678,1.72084775396277,111.515298728071,0,0.649776417447669,0.448026887097336,4.63466586434781,0,0,0,0.985903938436763,0,0,0,1.73192832808971,1.52015919285059,1.01104889002957,14.1588010851634,0,0.593768556259299,0.173485326766136,0,0.461230994512117,0.301445281105245,0,0.125666591329675,6.67426412882809,0.289198713839823,0,0.323533699894818,0,0,41.0061874679869,0.292780797011547,0,59.5214938636018,0.599075622529601,0,0,0.449371918214468,5.03250663100489,0.251308704225729,3.65031072403781,3.83573185995496,0.83115217823824,0.648965052271031,0.101839363850316,0,0.505445516867349,0.210441855886474,0,0,0,0.452114453507145,0.204109497453984,0,0,0.517406741478031,0.215567992932842,0,0.351902248327898,0,0.278047249225598,3.48252166522167,3.08673204611915,0,0.702213187313235,0.51469581422943,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0.350296027101508,0.329119699826961,0,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,0.308713837137853,191.973312913587,48.9233548327557,0.213288250535234,0,2.06187938115349,6.05050573870028,5.11469500843202,7.98947629672748,45.5547899082731,11.0348299665087,8.79673230800943,6.96347652144028,9.74820435595601,33.2563181202062,66.1382432616564,65.5174789006868,0.758671603812327,0,0,0.610953983535943,0.193952487167626,1.61312385747733,0.69560190836683,0.295220295959204,0.31399745568275,1.72756029490521,0.592905254174298,0,0.196558995113203,0.224862112384854,1.01430060694251,3.13530307678142,5.60176873919124,6.32931502391783,2.59416362840057,5.21666685057355,5.75072826109418,6.32639611036456,4.99260276983297,1.26289438973556,3.58794827043824,3.37710464954357,0.184753190166605,0,0.162964976442026,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0.54390568381871,7.86822836830458,1.93155722413313,0.80275294993896,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0.566153061577665,0,0.876767573733936,0.395287777946524,0.321321316421807,0,0.534196811001766,0.488660878060728,0.494910368917606,0,1.94224508923985,1.81394134178851,1.50884063804718,1.47650946440386,0.307435147943927,5.16856586336442,0.363533729477506,0,0,0,0,2.04263763452273,0.540183282093931,0.129358683782755,0.428674070063185,3.54680467284547,1.78368817602071,1.48094118541909,0.608929898229199,1.40803024838226,1.0591603543191,0,14.5099902588502,8.7190790415789,5.36785031860587,9.07229814423837,13.1312719796049,20.6951394007194,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0,1.86976272993241,2.23922323717853,1.65839968565309,2.86401185404534,0,0.813277868507395,1.83609079397062,0.836353184057875,1.9652630737156,1.61837215661785,2.23164330458407,1.57053565190418,34.9960427887841,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0,0,0,0,0,0,0,0.948033361884535,0,0.102710957164827,0.129920822977795,0.537080087002444,0.198681354781265,0.360586348559907,0.147689527174577,0.201932899896295,0.304827226619999,0.201652370273681,0.487289403698762,0,0.116876902181569,2.72076460338254,6.21560669447381,20.9033285900078,5.20442310728643,0,1.50145980360946,0.36630324853453,5.14484109789758,0.501572104035363,7.90652579663893,7.36520378411483,9.16632821503035,7.56154002312225,3.42541259885321,2.2661816921691,6.07520250208625,2.2516060161211,2.26571204492102,4.14208249401456,0.31136204275253,0,0.341467211508268,0.486213434136588,0.419226325255965,1.65459157605013,1.55572709461131,0.412070114477788,1.92551525755089,0.758091635291392,1.01391719956096,0.943131706930381,1.31098110457835,1.34452820050225,1.09127391015665,1.90517476513229,1.62238056322798,0.77163688185482,1.23625770240992,0.735994600671987,0.685738504770831,1.77475806159337,1.43061713968393,1.0174249164263,1.2234219453993,1.01537529470012,1.28049581010941,2.367627402940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| ||
|short_description=p3@Ndfip2 | |||
}} | }} |
Latest revision as of 15:47, 25 September 2015
Short description: | p3@Ndfip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ndfip2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -43bp_to_NM_001190989, NM_029561, uc007uxp.2, uc007uxq.2, uc007uxr.2_5end |
EntrezGene: | Ndfip2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.28e-07 | 9 |
epithelial cell of alimentary canal | 1.28e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.51e-20 | 31 |
gastrointestinal system | 4.59e-15 | 47 |
mucosa | 1.02e-12 | 15 |
intestinal mucosa | 5.68e-11 | 13 |
wall of intestine | 5.68e-11 | 13 |
gastrointestinal system mucosa | 5.68e-11 | 13 |
endoderm-derived structure | 1.21e-08 | 118 |
endoderm | 1.21e-08 | 118 |
presumptive endoderm | 1.21e-08 | 118 |
digestive system | 2.51e-08 | 116 |
digestive tract | 2.51e-08 | 116 |
primitive gut | 2.51e-08 | 116 |
organ component layer | 4.62e-08 | 24 |
epithelium of mucosa | 1.28e-07 | 9 |
gastrointestinal system epithelium | 1.28e-07 | 9 |
intestinal epithelium | 1.28e-07 | 9 |
subdivision of digestive tract | 2.21e-07 | 114 |