FFCP PHASE1:Mm9::chr19:32135928..32135955,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr19:32135928..32135955,- to FFCP PHASE1:Mm9::chr19:32135928..32135955,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54447 | |EntrezGene=54447 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JHE3 | |UniProt=Q9JHE3 | ||
|association_with_transcript=3bp_to_ENSMUST00000096119_5end | |||
|cluster_id=chr19:32135928..32135955,- | |||
|description=CAGE_peak_3_at_Asah2_5end | |||
|id=chr19:32135928..32135955,- | |||
|ontology_enrichment_celltype=CL:0000239!3.76e-08!6;CL:0000677!3.76e-08!6;CL:0000212!3.76e-08!6;CL:0000584!3.76e-08!6;CL:0002563!7.05e-08!9;CL:0002251!7.05e-08!9;CL:0000075!8.85e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.59e-11,6;CL:0000677,1.59e-11,6;CL:0000584,1.59e-11,6;CL:0000075,9.77e-10,7;CL:0002563,1.92e-09,9;CL:0002251,1.92e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.53e-16!43;UBERON:0005409!2.27e-15!59;UBERON:0000344!3.42e-14!15;UBERON:0001242!7.22e-12!13;UBERON:0000060!7.22e-12!13;UBERON:0001262!7.22e-12!13;UBERON:0004786!7.22e-12!13;UBERON:0003350!7.05e-08!9;UBERON:0004808!7.05e-08!9;UBERON:0001277!7.05e-08!9;UBERON:0004923!3.52e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-32,31;UBERON:0005409,8.34e-21,47;UBERON:0000344,8.77e-19,15;UBERON:0001242,2.47e-15,13;UBERON:0001262,2.47e-15,13;UBERON:0004786,2.47e-15,13;UBERON:0004923,1.90e-10,24;UBERON:0003350,1.92e-09,9;UBERON:0004808,1.92e-09,9;UBERON:0001277,1.92e-09,9;UBERON:0000485,1.72e-07,11;UBERON:0002108,2.26e-07,4 | |||
|phase1_expression=0,55.4870898146584,38.219936108721,45.9745601186382,39.0698669358151,10.5763941304491,10.9797941079897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.8375449850638,38.0819406571502,41.9189333803965,30.5841017272943,31.027857506768,6.46079626151671,18.3981994724749,5.76499327703792,0,0,0,0,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0,0,0,0,0,0.150722640552623,0,0.251333182659351,0,0,0,0,0,0.484875253135222,0,0,0,51.0914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2578369208479,0,0,0,0,0,0,0,6.20888089773638,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.2567896608685,34.9074747995878,0,0,0.644337306610467,6.25218926332362,14.4545728499166,27.3924901602085,39.3859121081945,31.4575003522861,34.6842588144372,38.0006861598598,28.2697926322724,35.9527763461689,45.3889904736858,35.8454291857861,0,0,0,0,0,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42699415653264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.7714111926537,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.756037385752609,0,2.62035076495413,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,1.54551675225752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,2.44471400581777,1.44224540067226,0.320919209591815,0.758091635291392,1.2673964994512,0.943131706930381,1.96647165686753,1.34452820050225,1.32101578597911,1.90517476513229,0.231768651889711,1.35036454324594,0.824171801606613,0.883193520806384,2.05721551431249,0.887379030796687,0.953744759789284,2.0348498328526,0.658765662907314,1.01537529470012,0.365855945745545,0.789209134313529,1.62964936615034,1.12228454331548,0.474540072496697,1.37906275325789,0.409231043169689,1.23949472948773,0.192906610981141,0,2.10538447600868,0.429742108096597,0,0,0 | |phase1_expression=0,55.4870898146584,38.219936108721,45.9745601186382,39.0698669358151,10.5763941304491,10.9797941079897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.8375449850638,38.0819406571502,41.9189333803965,30.5841017272943,31.027857506768,6.46079626151671,18.3981994724749,5.76499327703792,0,0,0,0,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0,0,0,0,0,0.150722640552623,0,0.251333182659351,0,0,0,0,0,0.484875253135222,0,0,0,51.0914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2578369208479,0,0,0,0,0,0,0,6.20888089773638,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.2567896608685,34.9074747995878,0,0,0.644337306610467,6.25218926332362,14.4545728499166,27.3924901602085,39.3859121081945,31.4575003522861,34.6842588144372,38.0006861598598,28.2697926322724,35.9527763461689,45.3889904736858,35.8454291857861,0,0,0,0,0,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42699415653264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.7714111926537,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.756037385752609,0,2.62035076495413,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,1.54551675225752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,2.44471400581777,1.44224540067226,0.320919209591815,0.758091635291392,1.2673964994512,0.943131706930381,1.96647165686753,1.34452820050225,1.32101578597911,1.90517476513229,0.231768651889711,1.35036454324594,0.824171801606613,0.883193520806384,2.05721551431249,0.887379030796687,0.953744759789284,2.0348498328526,0.658765662907314,1.01537529470012,0.365855945745545,0.789209134313529,1.62964936615034,1.12228454331548,0.474540072496697,1.37906275325789,0.409231043169689,1.23949472948773,0.192906610981141,0,2.10538447600868,0.429742108096597,0,0,0 | ||
|short_description=p3@Asah2 | |||
}} | }} |
Latest revision as of 15:01, 25 September 2015
Short description: | p3@Asah2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Asah2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 3bp_to_ENSMUST00000096119_5end |
EntrezGene: | Asah2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.59e-11 | 6 |
gut absorptive cell | 1.59e-11 | 6 |
enterocyte | 1.59e-11 | 6 |
columnar/cuboidal epithelial cell | 9.77e-10 | 7 |
intestinal epithelial cell | 1.92e-09 | 9 |
epithelial cell of alimentary canal | 1.92e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.09e-32 | 31 |
gastrointestinal system | 8.34e-21 | 47 |
mucosa | 8.77e-19 | 15 |
intestinal mucosa | 2.47e-15 | 13 |
wall of intestine | 2.47e-15 | 13 |
gastrointestinal system mucosa | 2.47e-15 | 13 |
organ component layer | 1.90e-10 | 24 |
epithelium of mucosa | 1.92e-09 | 9 |
gastrointestinal system epithelium | 1.92e-09 | 9 |
intestinal epithelium | 1.92e-09 | 9 |
simple columnar epithelium | 1.72e-07 | 11 |
small intestine | 2.26e-07 | 4 |