FFCP PHASE1:Mm9::chr11:70468632..70468652,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18643 | |EntrezGene=18643 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=P62962,Q3U7V7,Q5SX50 | |UniProt=P62962,Q3U7V7,Q5SX50 | ||
|association_with_transcript=-480bp_to_NM_011072,uc007jvv.2_5end | |||
|cluster_id=chr11:70468632..70468652,- | |||
|description=CAGE_peak_5_at_Pfn1_5end | |||
|id=chr11:70468632..70468652,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.14e-25,6;CL:0000677,2.14e-25,6;CL:0000584,2.14e-25,6;CL:0000075,1.03e-21,7;CL:0002563,8.53e-17,9;CL:0002251,8.53e-17,9;CL:0000682,8.06e-14,3;CL:0000066,9.25e-13,25;CL:0002076,6.90e-10,15;CL:0000223,2.75e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.67e-10!15;UBERON:0001242!1.73e-08!13;UBERON:0000060!1.73e-08!13;UBERON:0001262!1.73e-08!13;UBERON:0004786!1.73e-08!13;UBERON:0000160!7.20e-08!43;UBERON:0005409!1.01e-07!59;UBERON:0004923!5.26e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.72e-27,15;UBERON:0000160,1.60e-24,31;UBERON:0001242,3.88e-20,13;UBERON:0001262,3.88e-20,13;UBERON:0004786,3.88e-20,13;UBERON:0003350,8.53e-17,9;UBERON:0004808,8.53e-17,9;UBERON:0001277,8.53e-17,9;UBERON:0004923,1.30e-16,24;UBERON:0005409,2.20e-15,47;UBERON:0000485,1.17e-13,11;UBERON:0001962,3.68e-10,2;UBERON:0001961,3.68e-10,2;UBERON:0001744,3.68e-10,2;UBERON:0002465,4.88e-07,3;UBERON:0001007,8.72e-07,116;UBERON:0001555,8.72e-07,116;UBERON:0007026,8.72e-07,116 | |||
|phase1_expression=0.160148847104794,7.32848356042658,4.09499315450582,2.72217790176147,2.50447864973174,1.17515490338323,2.33612640595526,0,0,0,0,0,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0.261199789138935,7.03966660290989,6.42345986988076,4.01962374880514,3.4460959692726,3.01659725760245,0.570070258369122,1.00812051903972,0.443461021310609,0.635030673459631,0,0,0,0.664938581433969,0.612508068787107,0,0,0,0,0,0.485510353031154,0,0.101376931219515,0.183546752161682,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0.672187598284928,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.470354828542819,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,4.08731288333746,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0.520481771850815,0.459804208866946,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.281105173679186,0,0.431135985865684,0.378212160335639,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0.180062061461015,0,0.590292695242212,0.308534225774757,0,0.804820204198858,0.350296027101508,0.16455984991348,0,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,0,0.102904612379284,8.26046957459495,1.32225283331772,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,2.84717436926707,0.494096864172033,0,0.198956472041151,0.58489226135736,2.69645822596266,1.08069024937347,0.995706366271836,0,0.114248512609729,1.1270773567308,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0.889357881261447,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0,0.395287777946524,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,2.04036585640896,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.27338845544205,0,0,0,0.138199973804424,0.954670618015114,0.158167996790568,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0.632022241256357,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.292373642219257,0.192423683280659,0,0,0,0,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,1.11123363900808,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.192075457214608,0,0,0,0.192909220463705,0.412085900803307,0,0,0,0.476872379894642,0,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0,0,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,7.32848356042658,4.09499315450582,2.72217790176147,2.50447864973174,1.17515490338323,2.33612640595526,0,0,0,0,0,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0.261199789138935,7.03966660290989,6.42345986988076,4.01962374880514,3.4460959692726,3.01659725760245,0.570070258369122,1.00812051903972,0.443461021310609,0.635030673459631,0,0,0,0.664938581433969,0.612508068787107,0,0,0,0,0,0.485510353031154,0,0.101376931219515,0.183546752161682,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0.672187598284928,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.470354828542819,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,4.08731288333746,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0.520481771850815,0.459804208866946,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.281105173679186,0,0.431135985865684,0.378212160335639,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0.180062061461015,0,0.590292695242212,0.308534225774757,0,0.804820204198858,0.350296027101508,0.16455984991348,0,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,0,0.102904612379284,8.26046957459495,1.32225283331772,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,2.84717436926707,0.494096864172033,0,0.198956472041151,0.58489226135736,2.69645822596266,1.08069024937347,0.995706366271836,0,0.114248512609729,1.1270773567308,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0.889357881261447,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0,0.395287777946524,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,2.04036585640896,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.27338845544205,0,0,0,0.138199973804424,0.954670618015114,0.158167996790568,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0.632022241256357,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.292373642219257,0.192423683280659,0,0,0,0,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,1.11123363900808,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.192075457214608,0,0,0,0.192909220463705,0.412085900803307,0,0,0,0.476872379894642,0,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0,0,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | ||
|short_description=p5@Pfn1 | |||
}} | }} |
Latest revision as of 14:57, 25 September 2015
Short description: | p5@Pfn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pfn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -480bp_to_NM_011072, uc007jvv.2_5end |
EntrezGene: | Pfn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.14e-25 | 6 |
gut absorptive cell | 2.14e-25 | 6 |
enterocyte | 2.14e-25 | 6 |
columnar/cuboidal epithelial cell | 1.03e-21 | 7 |
intestinal epithelial cell | 8.53e-17 | 9 |
epithelial cell of alimentary canal | 8.53e-17 | 9 |
M cell of gut | 8.06e-14 | 3 |
epithelial cell | 9.25e-13 | 25 |
endo-epithelial cell | 6.90e-10 | 15 |
endodermal cell | 2.75e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.72e-27 | 15 |
intestine | 1.60e-24 | 31 |
intestinal mucosa | 3.88e-20 | 13 |
wall of intestine | 3.88e-20 | 13 |
gastrointestinal system mucosa | 3.88e-20 | 13 |
epithelium of mucosa | 8.53e-17 | 9 |
gastrointestinal system epithelium | 8.53e-17 | 9 |
intestinal epithelium | 8.53e-17 | 9 |
organ component layer | 1.30e-16 | 24 |
gastrointestinal system | 2.20e-15 | 47 |
simple columnar epithelium | 1.17e-13 | 11 |
gut-associated lymphoid tissue | 3.68e-10 | 2 |
mucosa-associated lymphoid tissue | 3.68e-10 | 2 |
lymphoid tissue | 3.68e-10 | 2 |
lymphoid system | 4.88e-07 | 3 |
digestive system | 8.72e-07 | 116 |
digestive tract | 8.72e-07 | 116 |
primitive gut | 8.72e-07 | 116 |