FFCP PHASE1:Mm9::chr19:29772395..29772417,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77836 | |EntrezGene=77836 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=730 | |||
|TSSclassifier=NA | |||
|UniProt=Q2TA50 | |UniProt=Q2TA50 | ||
|association_with_transcript=0bp_to_ENSMUST00000025719_5end | |association_with_transcript=0bp_to_ENSMUST00000025719_5end | ||
|cluster_id=chr19:29772395..29772417,+ | |||
|description=CAGE_peak_1_at_Mlana_5end | |description=CAGE_peak_1_at_Mlana_5end | ||
|id=chr19:29772395..29772417,+ | |id=chr19:29772395..29772417,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!4.25e-11!9;UBERON:0000019!4.25e-11!9;UBERON:0000047!4.25e-11!9;UBERON:0004088!4.25e-11!9;UBERON:0002104!4.25e-11!9;UBERON:0001456!4.25e-11!9;UBERON:0003072!4.25e-11!9;UBERON:0003071!4.25e-11!9;UBERON:0004128!4.25e-11!9;UBERON:0000020!3.08e-10!12;UBERON:0001032!3.08e-10!12;UBERON:0004456!3.08e-10!12;UBERON:0001444!6.97e-10!11;UBERON:0007100!7.87e-10!18;UBERON:0000948!7.87e-10!18;UBERON:0005498!7.87e-10!18;UBERON:0004140!7.87e-10!18;UBERON:0009881!7.87e-10!18;UBERON:0004141!7.87e-10!18;UBERON:0003084!7.87e-10!18;UBERON:0007005!7.87e-10!18;UBERON:0004139!7.87e-10!18;UBERON:0004291!7.87e-10!18;UBERON:0005085!1.29e-09!13;UBERON:0004535!2.20e-09!23;UBERON:0001009!2.20e-09!23;UBERON:0000014!8.93e-07!5;UBERON:0001003!8.93e-07!5;UBERON:0002097!8.93e-07!5;UBERON:0002199!8.93e-07!5;UBERON:0007029!8.93e-07!5;UBERON:0007376!8.93e-07!5;UBERON:0002416!8.93e-07!5;UBERON:0007383!8.93e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.07e-22,9;UBERON:0000019,1.07e-22,9;UBERON:0000047,1.07e-22,9;UBERON:0010312,1.07e-22,9;UBERON:0004088,1.07e-22,9;UBERON:0002104,1.07e-22,9;UBERON:0001456,1.07e-22,9;UBERON:0003072,1.07e-22,9;UBERON:0004128,1.07e-22,9;UBERON:0003071,1.07e-22,9;UBERON:0001444,3.20e-18,11;UBERON:0000020,1.52e-16,12;UBERON:0001032,1.52e-16,12;UBERON:0004456,1.52e-16,12;UBERON:0000033,4.01e-15,13;UBERON:0005085,4.01e-15,13;UBERON:0000014,3.96e-13,5;UBERON:0001003,3.96e-13,5;UBERON:0002097,3.96e-13,5;UBERON:0002199,3.96e-13,5;UBERON:0007029,3.96e-13,5;UBERON:0007376,3.96e-13,5;UBERON:0002416,3.96e-13,5;UBERON:0007383,3.96e-13,5;UBERON:0007100,6.50e-11,18;UBERON:0000948,6.50e-11,18;UBERON:0005498,6.50e-11,18;UBERON:0004140,6.50e-11,18;UBERON:0009881,6.50e-11,18;UBERON:0004141,6.50e-11,18;UBERON:0003084,6.50e-11,18;UBERON:0007005,6.50e-11,18;UBERON:0004139,6.50e-11,18;UBERON:0004291,6.50e-11,18;UBERON:0004535,4.01e-08,23;UBERON:0001009,4.01e-08,23 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,3.43840127926508,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.2466037537489,13.7927669540466,30.8068819940854,28.2697543794398,19.2902166829715,19.7305847538851,24.4697205744063,27.7357104696797,77.3523078509657,0,0,0,0.657587197282725,0,0,1.02891068203972,0,0,0,0,0,0,0.36012412292203,0.946978942340841,0.393528463494808,0.154267112887378,0.930135779001631,1.3413670069981,2.56883753207773,1.97471819896177,5.74586124276833,2.59420190546738,3.65499968563331,1.53685080703735,6.57611451925822,0,0,0,0,0,0,0,0,0,0,0,0.329397909448022,2.01068167040216,1.98956472041151,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0.327726629431476,0.863424909329478,1.01254341007058,0,0,0.983528546038072,0,0,0,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0.425820255624806,0,0,1.64970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,3.24109969256358,0,0,0,0,0,0,0,0,0,22.0947578941583,9.36493674836252,17.3098094543807,38.4378947690099,31.0226300518166,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.269141569828427,0,0,1.87682475451182,0.549454872801795,1.2862102744744,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.44449345560323,0.824140228955577,0,0.252697211763798,0.25347929989024,1.13175804831646,0.468207537349412,0.384150914429216,0.574354689556133,0,0.347652977834566,0.192909220463705,0.824171801606613,0.588795680537589,1.71434626192708,0.177475806159338,0,0.581385666529314,0.470546902076653,0.423073039458382,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.197008964751127,0.818462086339379,0.309873682371932,0.964533054905707,1.74867404556562,1.87145286756327,2.36358159453128,0.382576664137687,1.32354851471709,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,3.43840127926508,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.2466037537489,13.7927669540466,30.8068819940854,28.2697543794398,19.2902166829715,19.7305847538851,24.4697205744063,27.7357104696797,77.3523078509657,0,0,0,0.657587197282725,0,0,1.02891068203972,0,0,0,0,0,0,0.36012412292203,0.946978942340841,0.393528463494808,0.154267112887378,0.930135779001631,1.3413670069981,2.56883753207773,1.97471819896177,5.74586124276833,2.59420190546738,3.65499968563331,1.53685080703735,6.57611451925822,0,0,0,0,0,0,0,0,0,0,0,0.329397909448022,2.01068167040216,1.98956472041151,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0.327726629431476,0.863424909329478,1.01254341007058,0,0,0.983528546038072,0,0,0,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0.425820255624806,0,0,1.64970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,3.24109969256358,0,0,0,0,0,0,0,0,0,22.0947578941583,9.36493674836252,17.3098094543807,38.4378947690099,31.0226300518166,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.269141569828427,0,0,1.87682475451182,0.549454872801795,1.2862102744744,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.44449345560323,0.824140228955577,0,0.252697211763798,0.25347929989024,1.13175804831646,0.468207537349412,0.384150914429216,0.574354689556133,0,0.347652977834566,0.192909220463705,0.824171801606613,0.588795680537589,1.71434626192708,0.177475806159338,0,0.581385666529314,0.470546902076653,0.423073039458382,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.197008964751127,0.818462086339379,0.309873682371932,0.964533054905707,1.74867404556562,1.87145286756327,2.36358159453128,0.382576664137687,1.32354851471709,0.231867835620421 | ||
|short_description=p1@Mlana | |short_description=p1@Mlana | ||
}} | }} |
Latest revision as of 14:41, 25 September 2015
Short description: | p1@Mlana |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mlana_5end |
Coexpression cluster: | MCL_coexpression_mm9:730 |
Association with transcript: | 0bp_to_ENSMUST00000025719_5end |
EntrezGene: | Mlana |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.07e-22 | 9 |
camera-type eye | 1.07e-22 | 9 |
simple eye | 1.07e-22 | 9 |
immature eye | 1.07e-22 | 9 |
ocular region | 1.07e-22 | 9 |
visual system | 1.07e-22 | 9 |
face | 1.07e-22 | 9 |
optic cup | 1.07e-22 | 9 |
optic vesicle | 1.07e-22 | 9 |
eye primordium | 1.07e-22 | 9 |
subdivision of head | 3.20e-18 | 11 |
sense organ | 1.52e-16 | 12 |
sensory system | 1.52e-16 | 12 |
entire sense organ system | 1.52e-16 | 12 |
head | 4.01e-15 | 13 |
ectodermal placode | 4.01e-15 | 13 |
zone of skin | 3.96e-13 | 5 |
skin epidermis | 3.96e-13 | 5 |
skin of body | 3.96e-13 | 5 |
integument | 3.96e-13 | 5 |
surface | 3.96e-13 | 5 |
outer epithelium | 3.96e-13 | 5 |
integumental system | 3.96e-13 | 5 |
enveloping layer of ectoderm | 3.96e-13 | 5 |
primary circulatory organ | 6.50e-11 | 18 |
heart | 6.50e-11 | 18 |
primitive heart tube | 6.50e-11 | 18 |
primary heart field | 6.50e-11 | 18 |
anterior lateral plate mesoderm | 6.50e-11 | 18 |
heart tube | 6.50e-11 | 18 |
heart primordium | 6.50e-11 | 18 |
cardiac mesoderm | 6.50e-11 | 18 |
cardiogenic plate | 6.50e-11 | 18 |
heart rudiment | 6.50e-11 | 18 |
cardiovascular system | 4.01e-08 | 23 |
circulatory system | 4.01e-08 | 23 |