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FFCP PHASE1:Mm9::chr13:99124189..99124205,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15229
|EntrezGene=15229
|HGNC=
|HGNC=
|MCL_coexpression_id=668
|TSSclassifier=NA
|UniProt=Q61345
|UniProt=Q61345
|association_with_transcript=0bp_to_ENSMUST00000105098,NM_008242,uc009van.1_5end
|association_with_transcript=0bp_to_ENSMUST00000105098,NM_008242,uc009van.1_5end
|cluster_id=chr13:99124189..99124205,+
|description=CAGE_peak_1_at_Foxd1_5end
|description=CAGE_peak_1_at_Foxd1_5end
|id=chr13:99124189..99124205,+
|id=chr13:99124189..99124205,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.11e-14!102;UBERON:0000924!2.11e-14!102;UBERON:0006601!2.11e-14!102;UBERON:0002346!2.54e-14!71;UBERON:0003075!2.54e-14!71;UBERON:0007284!2.54e-14!71;UBERON:0000033!9.12e-13!63;UBERON:0003056!4.24e-11!49;UBERON:0001049!5.14e-10!52;UBERON:0005068!5.14e-10!52;UBERON:0006241!5.14e-10!52;UBERON:0007135!5.14e-10!52;UBERON:0000073!9.36e-10!75;UBERON:0001016!9.36e-10!75;UBERON:0000955!1.34e-09!50;UBERON:0006238!1.34e-09!50;UBERON:0001017!1.91e-09!73;UBERON:0005743!1.91e-09!73;UBERON:0002616!3.03e-09!49;UBERON:0003080!8.58e-08!40;UBERON:0002780!1.65e-07!39;UBERON:0001890!1.65e-07!39;UBERON:0006240!1.65e-07!39;UBERON:0000153!1.81e-07!94;UBERON:0007811!2.76e-07!86;UBERON:0001894!7.81e-07!10;UBERON:0006222!7.81e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.70e-13,95;UBERON:0000924,1.70e-13,95;UBERON:0006601,1.70e-13,95;UBERON:0002346,3.18e-13,64;UBERON:0003075,3.18e-13,64;UBERON:0007284,3.18e-13,64;UBERON:0010371,1.22e-12,73;UBERON:0003056,2.94e-12,49;UBERON:0000073,3.17e-11,54;UBERON:0001016,3.80e-11,75;UBERON:0001049,7.98e-11,52;UBERON:0005068,7.98e-11,52;UBERON:0006241,7.98e-11,52;UBERON:0007135,7.98e-11,52;UBERON:0001017,8.79e-11,73;UBERON:0010314,4.75e-10,92;UBERON:0000955,7.96e-10,47;UBERON:0006238,7.96e-10,47;UBERON:0002616,2.01e-09,46;UBERON:0003080,1.95e-08,40;UBERON:0002780,4.15e-08,39;UBERON:0001890,4.15e-08,39;UBERON:0006240,4.15e-08,39;UBERON:0001894,9.25e-08,10;UBERON:0006222,9.25e-08,10;UBERON:0000007,1.59e-07,8;UBERON:0003296,1.59e-07,8;UBERON:0010133,1.59e-07,8
|phase1_expression=13.2923543096979,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0.992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,4.28049181116963,4.76471576731718,8.62669735159903,622.001118756691,0.218025156380447,1.09843091367236,1.74986909166855,195.841003853882,11.5002051491977,0,0,0,0.514518872071894,0.286533439938757,0,1.21389876515759,1.05798195854407,3.80298842103708,177.554534804225,346.824970483344,0,0,0.7104801149461,125.232846196693,49.5641613864805,1.55534418462716,2.02508907497536,2.52389953621658,3.14216082844184,6.18431914664518,0.857435594504678,0.575072826109418,0,8.8092704799511,2.17068474744819,1.22885226604995,7.38563211289086,4.94033275453012,7.8137005583514,5.02529398202486,11.2552522006336,12.5294563176984,6.48182888042069,4.27115042397309,4.10078780815661,2.57469057332826,4.30757892608677,0.289864488701678,0,0,0,0,0,0.702222100658759,29.654876128582,28.3166745017127,32.8605804294616,0.281686839553361,35.931413676009,30.5766287647975,7.11066703153331,0.216491041011214,0.506719730950197,0,0.45673551887624,0,4.30482203287992,48.0554355142196,16.4411358288556,12.6838523490832,9.19408107370998,9.7598626922635,3.26733137457156,0,1.3013942122792,0.884610551949874,2.42650274921114,0.883366073841574,0.969750506270444,0,5.27005434620785,2.72280718857492,0,0,0,0,5.84183493678809,2.28750301409313,1.25654352112864,5.56237824615285,4.85859368927628,4.1557608911912,5.67844420737152,1.12023300235348,0.622034853050465,0,2.10441855886474,24.9831250488391,14.0240283704418,13.3245976055958,10.5493372485001,13.1310443362063,13.3238269096244,10.2134879770104,3.10444044886819,0.215567992932842,0.189106080167819,0.527853372491847,2.19195732427575,5.56094498451196,4.52727816478817,14.1989674121481,8.95654200683219,0,0,0.284163499395593,0.621377317606506,2.34526059981096,1.08037236876609,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.324275238183423,0.292399974850665,0.219550115291051,0.134206418760372,2.94405927989778,3.70456604565424,0.330418782983798,0,7.03851226766272,4.41249676534833,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,80.2295221031535,51.411830674378,33.8123207019241,26.6783239477362,20.3650111526007,24.3371295019405,8.66340558602325,3.98547399544926,4.39596437955849,5.05928372079382,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,12.6959245886225,0.814824882210129,0.509235257325564,0.234690248288502,0.670025029767263,0,0.975668239288994,0,0.44292937929755,0.637819074629948,0.491589944147214,0,0,0,0,0,0,5.77982123956051,2.57865710502847,0,0.757412781613119,0,0,0,0,0.445597348164788,0,0.404810701674894,0,0,7.06906896127976,0,1.06839362200353,2.44330439030364,0,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0,0,0.363533729477506,0.356497378384721,0,0,0,9.19186935535228,106.596167666536,145.399160571816,117.242358162281,105.517439017153,153.753920772985,128.677334110859,84.6412558538586,0.704015124191131,0.21183207086382,0.441056796109924,0.98931751764888,6.29711264114032,3.92034012033013,2.38744688006273,2.1338316966858,0,2.78137953015765,0,0,0,0,0,0,0,0.139951452323658,0,0,0.949007980743406,2.03319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0.388844919875379,0,0,1.04661582230785,0.496375471371293,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.419437377702843,0,0,0,1.62180172232131,0.616265742988964,0,0.716106782669926,0.198681354781265,0.120195449519969,0.295379054349154,0,0,0,0,0,0,3.85441652145859,0.221985953374065,1.52513556236109,1.84673078000486,0.386379188064381,0,0,0.428736758158132,0,0,2.30162618253588,1.14579102687879,3.95262319390481,1.37016503954128,1.5107877947794,4.05013500139084,2.2516060161211,3.17199686288943,4.14208249401456,54.5921448292769,25.138567024265,21.3417007192668,11.6691224192781,12.367176595051,7.72142735490059,5.33392146723877,3.7086310303001,4.81378814387723,5.81203587056734,4.81610669791456,5.28153755881013,5.61849044819294,6.01836432605771,6.83482080571798,5.71552429539688,6.02598494913249,6.75182271622968,6.1812885120496,4.56316652416632,5.48590803816665,5.50174999093946,6.91464950847231,5.0871245821315,4.04670335785922,4.06150117880047,6.58540702341981,4.73525480588117,5.16055632614275,6.73370725989286,4.50813068871862,5.31924204828043,2.86461730218783,6.66228417099654,7.52335782826451,16.2376875659665,9.82512755470715,6.87587372954555,7.84282161482258,5.95596831622692,1.85494268496337
|phase1_expression=13.2923543096979,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0.992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,4.28049181116963,4.76471576731718,8.62669735159903,622.001118756691,0.218025156380447,1.09843091367236,1.74986909166855,195.841003853882,11.5002051491977,0,0,0,0.514518872071894,0.286533439938757,0,1.21389876515759,1.05798195854407,3.80298842103708,177.554534804225,346.824970483344,0,0,0.7104801149461,125.232846196693,49.5641613864805,1.55534418462716,2.02508907497536,2.52389953621658,3.14216082844184,6.18431914664518,0.857435594504678,0.575072826109418,0,8.8092704799511,2.17068474744819,1.22885226604995,7.38563211289086,4.94033275453012,7.8137005583514,5.02529398202486,11.2552522006336,12.5294563176984,6.48182888042069,4.27115042397309,4.10078780815661,2.57469057332826,4.30757892608677,0.289864488701678,0,0,0,0,0,0.702222100658759,29.654876128582,28.3166745017127,32.8605804294616,0.281686839553361,35.931413676009,30.5766287647975,7.11066703153331,0.216491041011214,0.506719730950197,0,0.45673551887624,0,4.30482203287992,48.0554355142196,16.4411358288556,12.6838523490832,9.19408107370998,9.7598626922635,3.26733137457156,0,1.3013942122792,0.884610551949874,2.42650274921114,0.883366073841574,0.969750506270444,0,5.27005434620785,2.72280718857492,0,0,0,0,5.84183493678809,2.28750301409313,1.25654352112864,5.56237824615285,4.85859368927628,4.1557608911912,5.67844420737152,1.12023300235348,0.622034853050465,0,2.10441855886474,24.9831250488391,14.0240283704418,13.3245976055958,10.5493372485001,13.1310443362063,13.3238269096244,10.2134879770104,3.10444044886819,0.215567992932842,0.189106080167819,0.527853372491847,2.19195732427575,5.56094498451196,4.52727816478817,14.1989674121481,8.95654200683219,0,0,0.284163499395593,0.621377317606506,2.34526059981096,1.08037236876609,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.324275238183423,0.292399974850665,0.219550115291051,0.134206418760372,2.94405927989778,3.70456604565424,0.330418782983798,0,7.03851226766272,4.41249676534833,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,80.2295221031535,51.411830674378,33.8123207019241,26.6783239477362,20.3650111526007,24.3371295019405,8.66340558602325,3.98547399544926,4.39596437955849,5.05928372079382,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,12.6959245886225,0.814824882210129,0.509235257325564,0.234690248288502,0.670025029767263,0,0.975668239288994,0,0.44292937929755,0.637819074629948,0.491589944147214,0,0,0,0,0,0,5.77982123956051,2.57865710502847,0,0.757412781613119,0,0,0,0,0.445597348164788,0,0.404810701674894,0,0,7.06906896127976,0,1.06839362200353,2.44330439030364,0,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0,0,0.363533729477506,0.356497378384721,0,0,0,9.19186935535228,106.596167666536,145.399160571816,117.242358162281,105.517439017153,153.753920772985,128.677334110859,84.6412558538586,0.704015124191131,0.21183207086382,0.441056796109924,0.98931751764888,6.29711264114032,3.92034012033013,2.38744688006273,2.1338316966858,0,2.78137953015765,0,0,0,0,0,0,0,0.139951452323658,0,0,0.949007980743406,2.03319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0.388844919875379,0,0,1.04661582230785,0.496375471371293,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.419437377702843,0,0,0,1.62180172232131,0.616265742988964,0,0.716106782669926,0.198681354781265,0.120195449519969,0.295379054349154,0,0,0,0,0,0,3.85441652145859,0.221985953374065,1.52513556236109,1.84673078000486,0.386379188064381,0,0,0.428736758158132,0,0,2.30162618253588,1.14579102687879,3.95262319390481,1.37016503954128,1.5107877947794,4.05013500139084,2.2516060161211,3.17199686288943,4.14208249401456,54.5921448292769,25.138567024265,21.3417007192668,11.6691224192781,12.367176595051,7.72142735490059,5.33392146723877,3.7086310303001,4.81378814387723,5.81203587056734,4.81610669791456,5.28153755881013,5.61849044819294,6.01836432605771,6.83482080571798,5.71552429539688,6.02598494913249,6.75182271622968,6.1812885120496,4.56316652416632,5.48590803816665,5.50174999093946,6.91464950847231,5.0871245821315,4.04670335785922,4.06150117880047,6.58540702341981,4.73525480588117,5.16055632614275,6.73370725989286,4.50813068871862,5.31924204828043,2.86461730218783,6.66228417099654,7.52335782826451,16.2376875659665,9.82512755470715,6.87587372954555,7.84282161482258,5.95596831622692,1.85494268496337
|short_description=p1@Foxd1
|short_description=p1@Foxd1
}}
}}

Latest revision as of 14:31, 25 September 2015

Short description:p1@Foxd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Foxd1_5end
Coexpression cluster:MCL_coexpression_mm9:668
Association with transcript: 0bp_to_ENSMUST00000105098, NM_008242, uc009van.1_5end
EntrezGene:Foxd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Foxd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.63
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7622.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C4195.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6177.55
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1346.82
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C8125.23
Mouse Microglia, donor2.CNhs12634.11736-123E849.56
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.39
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D92.57
Mouse Schwann, donor2.CNhs12573.11746-123F94.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I729.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E328.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I832.86
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H135.93
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C548.06
adrenal gland, embryo E16.CNhs11004.1254-43D616.44
adrenal gland, embryo E17.CNhs11043.1263-45I112.68
adrenal gland, embryo E18.CNhs11026.1262-18F59.19
adrenal gland, neonate N00.CNhs11191.1311-23C19.76
adrenal gland, neonate N25.CNhs11223.1377-27I33.27
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D55.56
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C624.98
eyeball, embryo E14.CNhs10521.399-16E214.02
eyeball, embryo E15.CNhs10593.426-16C913.32
eyeball, embryo E17.CNhs11023.1261-18D410.55
eyeball, neonate N00.CNhs11207.633-15C613.13
eyeball, neonate N01.CNhs11140.1532-43E713.32
eyeball, neonate N02.CNhs11205.1551-44G810.21
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B514.20
gonad, embryo E13.CNhs11044.1564-45I68.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I57.04
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I980.23
kidney, embryo E15.CNhs10997.434-16F851.41
kidney, embryo E16.CNhs10584.464-22A533.81
kidney, embryo E17.CNhs11028.483-18I226.68
kidney, embryo E18.CNhs11001.1288-20C720.37
kidney, neonate N00.CNhs11214.646-21G724.34
kidney, neonate N10.CNhs11206.758-6D58.66
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F34.40
kidney, neonate N30.CNhs11203.1385-42H15.06
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G212.70
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E6106.60
pituitary gland, embryo E13.CNhs11009.370-44C7145.40
pituitary gland, embryo E14.CNhs11037.398-44A5117.24
pituitary gland, embryo E15.CNhs10592.427-16B9105.52
pituitary gland, embryo E16.CNhs11036.449-43F6153.75
pituitary gland, embryo E17.CNhs11039.1265-44F5128.68
pituitary gland, neonate N00.CNhs11190.1308-22E984.64
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G46.30
skin, neonate N03.CNhs11215.662-22H33.92
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I854.59
whole body, embryo E12.CNhs10587.857-27C925.14
whole body, embryo E13.CNhs10512.372-23H221.34
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B112.37
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I516.24
whole body, embryo E18.CNhs10516.493-3B39.83
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C67.84
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.70e-1395
ectoderm1.70e-1395
presumptive ectoderm1.70e-1395
neurectoderm3.18e-1364
neural plate3.18e-1364
presumptive neural plate3.18e-1364
ecto-epithelium1.22e-1273
pre-chordal neural plate2.94e-1249
regional part of nervous system3.17e-1154
nervous system3.80e-1175
neural tube7.98e-1152
neural rod7.98e-1152
future spinal cord7.98e-1152
neural keel7.98e-1152
central nervous system8.79e-1173
structure with developmental contribution from neural crest4.75e-1092
brain7.96e-1047
future brain7.96e-1047
regional part of brain2.01e-0946
anterior neural tube1.95e-0840
regional part of forebrain4.15e-0839
forebrain4.15e-0839
future forebrain4.15e-0839
diencephalon9.25e-0810
future diencephalon9.25e-0810
pituitary gland1.59e-078
gland of diencephalon1.59e-078
neuroendocrine gland1.59e-078
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