FFCP PHASE1:Mm9::chr16:45654196..45654209,-: Difference between revisions
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{{FFCP|EntrezGene=212998|HGNC=|MCL_coexpression_id=12|UniProt=E9QP50,Q8C5C9|association_with_transcript=21bp_to_ENSMUST00000036732,NM_145389,uc012agh.1_5end|description=CAGE_peak_1_at_BC016579_5end|id=chr16:45654196..45654209,-|ontology_enrichment_celltype=CL:0002563!1.19e-07!9;CL:0002251!1.19e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,7.07e-11,9;CL:0002251,7.07e-11,9;CL:0002076,2.25e-09,15;CL:0000066,1.02e-08,25;CL:0000239,1.78e-08,6;CL:0000677,1.78e-08,6;CL:0000584,1.78e-08,6;CL:0000223,3.37e-07,20;CL:0000075,4.84e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!9.74e-18!59;UBERON:0004119!5.92e-17!130;UBERON:0000925!5.92e-17!130;UBERON:0006595!5.92e-17!130;UBERON:0001007!5.22e-16!128;UBERON:0001555!5.22e-16!128;UBERON:0007026!5.22e-16!128;UBERON:0000160!1.48e-15!43;UBERON:0004921!6.96e-15!126;UBERON:0004185!6.96e-15!126;UBERON:0000344!1.41e-11!15;UBERON:0001242!2.82e-10!13;UBERON:0000060!2.82e-10!13;UBERON:0001262!2.82e-10!13;UBERON:0004786!2.82e-10!13;UBERON:0004923!7.79e-09!24;UBERON:0003350!1.19e-07!9;UBERON:0004808!1.19e-07!9;UBERON:0001277!1.19e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.79e-28,47;UBERON:0000160,4.29e-27,31;UBERON:0004119,6.87e-17,118;UBERON:0000925,6.87e-17,118;UBERON:0006595,6.87e-17,118;UBERON:0000344,7.19e-17,15;UBERON:0001007,1.09e-15,116;UBERON:0001555,1.09e-15,116;UBERON:0007026,1.09e-15,116;UBERON:0001242,6.97e-15,13;UBERON:0001262,6.97e-15,13;UBERON:0004786,6.97e-15,13;UBERON:0004921,2.85e-14,114;UBERON:0004923,3.70e-11,24;UBERON:0003350,7.07e-11,9;UBERON:0004808,7.07e-11,9;UBERON:0001277,7.07e-11,9;UBERON:0000485,2.14e-08,11|phase1_expression=0,32.8036883180999,37.7649368693315,35.6907769342059,25.5456822272637,41.6340594341487,37.6116351358796,0.129123323441576,0,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0,0,0,0,0,15.359272588167,20.188016733911,26.988902313406,34.460959692726,29.7350301106527,13.6816862008589,12.6015064879965,25.49900872536,0,0,0,10.6875099307972,9.97407872150954,12.8626694445293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,2.6087803983151,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,2.59789249213457,3.29367825117628,4.04419556011827,2.8545969929765,0,0.593768556259299,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,57.7814459776179,0,0,16.3492515333498,0.11981512450592,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0,0.101839363850316,0.497627882440372,0.505445516867349,4.20883711772948,0,0,0,0.150704817835715,0,0,0,0.776110112217047,0,0,0,0,1.11218899690239,2.78601733217733,1.85203922767149,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0,44.2761169198289,15.073682299822,0,0,2.19074684247559,6.05050573870028,5.78182913996663,6.27744566171445,13.7613427847908,8.07024878147653,12.3154252312132,14.9217354030863,16.182019230887,13.4822911298133,22.9106332867176,26.6849306160852,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.252946148497029,0.295220295959204,0.31399745568275,0.370191491765402,0,0,0.786235980452812,0.224862112384854,0,0.72353147925725,1.01850340712568,1.15078454980324,0.162135226775035,0.274561413188081,2.87536413054709,3.34926852901653,2.18426371180192,3.28352541331245,0.358794827043824,1.4473305640901,1.10851914099963,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.585400943573396,0.630540576424764,0.221464689648775,0.478364305972461,0.655453258862952,0.172684981865896,0,0,0,13.277635371514,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,1.13163047853539,0.590603785761546,0.922305443831782,2.32585463851399,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0,0,0,3.98941903708308,5.71946591332314,9.04166432025344,29.6795255294664,8.07322133479528,13.3894693340506,16.4733834724328,31.1867709515616,21.2781010739791,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0,0,0.679913719975421,0.419854356970974,0.552799895217695,34.3681422485441,0,1.42323626988794,4.42821897369385,7.73626695253534,8.95286511359328,13.2167059457124,14.1337409290324,25.1285704304668,26.9599144446929,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0.302899349844443,0.228620419965,0.302478555410522,0.0974578807397524,0.384847366561318,0.116876902181569,8.38902419376282,0.221985953374065,0,2.01461539636894,2.31827512838629,1.12609485270709,1.64836461840539,8.57473516316263,2.00628841614145,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,1.33348036680969,0.824140228955577,1.28367683836726,0.505394423527595,1.52087579934144,1.32038438970253,0.655490552289177,0.832326981263301,1.14870937911227,0.952587382566147,0.347652977834566,0.77163688185482,0.412085900803307,0.735994600671987,1.37147700954166,0.70990322463735,0.476872379894642,1.16277133305863,0.564656282491984,0.846146078916765,1.28049581010941,1.05227884575137,0.814824683075171,1.12228454331548,1.06771516311757,1.0835493061312,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,2.57324769289949,3.22306581072447,0.57386499620653,1.32354851471709,0.695603506861264|short_description=p1@BC016579}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=212998 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=E9QP50,Q8C5C9 | |||
|association_with_transcript=21bp_to_ENSMUST00000036732,NM_145389,uc012agh.1_5end | |||
|cluster_id=chr16:45654196..45654209,- | |||
|description=CAGE_peak_1_at_BC016579_5end | |||
|id=chr16:45654196..45654209,- | |||
|ontology_enrichment_celltype=CL:0002563!1.19e-07!9;CL:0002251!1.19e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.07e-11,9;CL:0002251,7.07e-11,9;CL:0002076,2.25e-09,15;CL:0000066,1.02e-08,25;CL:0000239,1.78e-08,6;CL:0000677,1.78e-08,6;CL:0000584,1.78e-08,6;CL:0000223,3.37e-07,20;CL:0000075,4.84e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.74e-18!59;UBERON:0004119!5.92e-17!130;UBERON:0000925!5.92e-17!130;UBERON:0006595!5.92e-17!130;UBERON:0001007!5.22e-16!128;UBERON:0001555!5.22e-16!128;UBERON:0007026!5.22e-16!128;UBERON:0000160!1.48e-15!43;UBERON:0004921!6.96e-15!126;UBERON:0004185!6.96e-15!126;UBERON:0000344!1.41e-11!15;UBERON:0001242!2.82e-10!13;UBERON:0000060!2.82e-10!13;UBERON:0001262!2.82e-10!13;UBERON:0004786!2.82e-10!13;UBERON:0004923!7.79e-09!24;UBERON:0003350!1.19e-07!9;UBERON:0004808!1.19e-07!9;UBERON:0001277!1.19e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.79e-28,47;UBERON:0000160,4.29e-27,31;UBERON:0004119,6.87e-17,118;UBERON:0000925,6.87e-17,118;UBERON:0006595,6.87e-17,118;UBERON:0000344,7.19e-17,15;UBERON:0001007,1.09e-15,116;UBERON:0001555,1.09e-15,116;UBERON:0007026,1.09e-15,116;UBERON:0001242,6.97e-15,13;UBERON:0001262,6.97e-15,13;UBERON:0004786,6.97e-15,13;UBERON:0004921,2.85e-14,114;UBERON:0004923,3.70e-11,24;UBERON:0003350,7.07e-11,9;UBERON:0004808,7.07e-11,9;UBERON:0001277,7.07e-11,9;UBERON:0000485,2.14e-08,11 | |||
|phase1_expression=0,32.8036883180999,37.7649368693315,35.6907769342059,25.5456822272637,41.6340594341487,37.6116351358796,0.129123323441576,0,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0,0,0,0,0,15.359272588167,20.188016733911,26.988902313406,34.460959692726,29.7350301106527,13.6816862008589,12.6015064879965,25.49900872536,0,0,0,10.6875099307972,9.97407872150954,12.8626694445293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,2.6087803983151,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,2.59789249213457,3.29367825117628,4.04419556011827,2.8545969929765,0,0.593768556259299,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,57.7814459776179,0,0,16.3492515333498,0.11981512450592,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0,0.101839363850316,0.497627882440372,0.505445516867349,4.20883711772948,0,0,0,0.150704817835715,0,0,0,0.776110112217047,0,0,0,0,1.11218899690239,2.78601733217733,1.85203922767149,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0,44.2761169198289,15.073682299822,0,0,2.19074684247559,6.05050573870028,5.78182913996663,6.27744566171445,13.7613427847908,8.07024878147653,12.3154252312132,14.9217354030863,16.182019230887,13.4822911298133,22.9106332867176,26.6849306160852,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.252946148497029,0.295220295959204,0.31399745568275,0.370191491765402,0,0,0.786235980452812,0.224862112384854,0,0.72353147925725,1.01850340712568,1.15078454980324,0.162135226775035,0.274561413188081,2.87536413054709,3.34926852901653,2.18426371180192,3.28352541331245,0.358794827043824,1.4473305640901,1.10851914099963,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.585400943573396,0.630540576424764,0.221464689648775,0.478364305972461,0.655453258862952,0.172684981865896,0,0,0,13.277635371514,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,1.13163047853539,0.590603785761546,0.922305443831782,2.32585463851399,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0,0,0,3.98941903708308,5.71946591332314,9.04166432025344,29.6795255294664,8.07322133479528,13.3894693340506,16.4733834724328,31.1867709515616,21.2781010739791,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0,0,0.679913719975421,0.419854356970974,0.552799895217695,34.3681422485441,0,1.42323626988794,4.42821897369385,7.73626695253534,8.95286511359328,13.2167059457124,14.1337409290324,25.1285704304668,26.9599144446929,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0.302899349844443,0.228620419965,0.302478555410522,0.0974578807397524,0.384847366561318,0.116876902181569,8.38902419376282,0.221985953374065,0,2.01461539636894,2.31827512838629,1.12609485270709,1.64836461840539,8.57473516316263,2.00628841614145,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,1.33348036680969,0.824140228955577,1.28367683836726,0.505394423527595,1.52087579934144,1.32038438970253,0.655490552289177,0.832326981263301,1.14870937911227,0.952587382566147,0.347652977834566,0.77163688185482,0.412085900803307,0.735994600671987,1.37147700954166,0.70990322463735,0.476872379894642,1.16277133305863,0.564656282491984,0.846146078916765,1.28049581010941,1.05227884575137,0.814824683075171,1.12228454331548,1.06771516311757,1.0835493061312,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,2.57324769289949,3.22306581072447,0.57386499620653,1.32354851471709,0.695603506861264 | |||
|short_description=p1@BC016579 | |||
}} |
Latest revision as of 14:22, 25 September 2015
Short description: | p1@BC016579 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC016579_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 21bp_to_ENSMUST00000036732, NM_145389, uc012agh.1_5end |
EntrezGene: | BC016579 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.07e-11 | 9 |
epithelial cell of alimentary canal | 7.07e-11 | 9 |
endo-epithelial cell | 2.25e-09 | 15 |
epithelial cell | 1.02e-08 | 25 |
brush border epithelial cell | 1.78e-08 | 6 |
gut absorptive cell | 1.78e-08 | 6 |
enterocyte | 1.78e-08 | 6 |
endodermal cell | 3.37e-07 | 20 |
columnar/cuboidal epithelial cell | 4.84e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.79e-28 | 47 |
intestine | 4.29e-27 | 31 |
endoderm-derived structure | 6.87e-17 | 118 |
endoderm | 6.87e-17 | 118 |
presumptive endoderm | 6.87e-17 | 118 |
mucosa | 7.19e-17 | 15 |
digestive system | 1.09e-15 | 116 |
digestive tract | 1.09e-15 | 116 |
primitive gut | 1.09e-15 | 116 |
intestinal mucosa | 6.97e-15 | 13 |
wall of intestine | 6.97e-15 | 13 |
gastrointestinal system mucosa | 6.97e-15 | 13 |
subdivision of digestive tract | 2.85e-14 | 114 |
organ component layer | 3.70e-11 | 24 |
epithelium of mucosa | 7.07e-11 | 9 |
gastrointestinal system epithelium | 7.07e-11 | 9 |
intestinal epithelium | 7.07e-11 | 9 |
simple columnar epithelium | 2.14e-08 | 11 |