FFCP PHASE1:Mm9::chr2:119055650..119055662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72112 | |EntrezGene=72112 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TT52 | |UniProt=Q7TT52 | ||
|association_with_transcript=-8bp_to_ENSMUST00000076084_5end | |association_with_transcript=-8bp_to_ENSMUST00000076084_5end | ||
|cluster_id=chr2:119055650..119055662,- | |||
|description=CAGE_peak_4_at_Ppp1r14d_5end | |description=CAGE_peak_4_at_Ppp1r14d_5end | ||
|id=chr2:119055650..119055662,- | |id=chr2:119055650..119055662,- | ||
|ontology_enrichment_celltype=CL:0002563!5.30e-12!9;CL:0002251!5.30e-12!9;CL:0000239!7.93e-09!6;CL:0000677!7.93e-09!6;CL:0000212!7.93e-09!6;CL:0000584!7.93e-09!6;CL:0000075!2.15e-07!7 | |ontology_enrichment_celltype=CL:0002563!5.30e-12!9;CL:0002251!5.30e-12!9;CL:0000239!7.93e-09!6;CL:0000677!7.93e-09!6;CL:0000212!7.93e-09!6;CL:0000584!7.93e-09!6;CL:0000075!2.15e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.83e-18,9;CL:0002251,1.83e-18,9;CL:0000239,2.52e-13,6;CL:0000677,2.52e-13,6;CL:0000584,2.52e-13,6;CL:0000075,2.61e-11,7;CL:0000066,2.03e-10,25;CL:0002076,2.24e-10,15;CL:0000682,9.93e-08,3;CL:0000223,2.34e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.06e-23!43;UBERON:0005409!1.10e-20!59;UBERON:0000344!1.14e-19!15;UBERON:0001242!3.74e-17!13;UBERON:0000060!3.74e-17!13;UBERON:0001262!3.74e-17!13;UBERON:0004786!3.74e-17!13;UBERON:0004923!1.52e-13!24;UBERON:0003350!5.30e-12!9;UBERON:0004808!5.30e-12!9;UBERON:0001277!5.30e-12!9;UBERON:0000485!2.19e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.35e-52,31;UBERON:0005409,1.54e-34,47;UBERON:0000344,6.51e-31,15;UBERON:0001242,7.95e-27,13;UBERON:0001262,7.95e-27,13;UBERON:0004786,7.95e-27,13;UBERON:0004923,2.39e-20,24;UBERON:0003350,1.83e-18,9;UBERON:0004808,1.83e-18,9;UBERON:0001277,1.83e-18,9;UBERON:0000485,8.73e-15,11;UBERON:0001007,6.39e-12,116;UBERON:0001555,6.39e-12,116;UBERON:0007026,6.39e-12,116;UBERON:0004119,1.35e-11,118;UBERON:0000925,1.35e-11,118;UBERON:0006595,1.35e-11,118;UBERON:0004921,3.90e-10,114;UBERON:0002108,1.19e-09,4;UBERON:0000331,1.65e-07,3;UBERON:0002116,1.65e-07,3;UBERON:0001204,1.65e-07,3;UBERON:0001168,1.65e-07,3 | |||
|phase1_expression=0,17.4487703819681,22.7499619694768,14.8207463540347,17.5313505481222,3.3575854382378,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7193028969934,13.0763290208287,16.6527269593356,22.830385796431,10.3426191689227,20.332505881832,11.3413558391969,11.5299865540758,0,0,0,4.33277429626912,4.15586613396231,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,2.71914464507811,0.144599356919912,0,0,0,0,3.72783522436244,0,0,16.6047085885584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.363553430315,28.0317600663357,0,0,0.38660238396628,3.63030344322017,10.6741461045538,11.9842144450912,23.2519240156811,14.3288090609889,8.54539709920916,12.5342577385925,9.94316844307513,13.4822911298133,21.8299430373441,24.8926591567959,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87642439752332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,18.0718118710507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0.209088296014469,0.87345025498471,0,0.0826534557253359,0,5.4438288782553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,1.33348036680969,1.44224540067226,0.64183841918363,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.320125762024346,0.459483751644906,0.952587382566147,0,0.192909220463705,0,0.147198920134397,1.02860775715625,0.532427418478012,0.715308569841963,0.581385666529314,0.564656282491984,0.592302255241736,0.548783918618318,0.526139422875686,0.407412341537585,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.464810523557898,0.964533054905707,0,0.233931608445408,1.07435527024149,0,0,0 | |phase1_expression=0,17.4487703819681,22.7499619694768,14.8207463540347,17.5313505481222,3.3575854382378,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7193028969934,13.0763290208287,16.6527269593356,22.830385796431,10.3426191689227,20.332505881832,11.3413558391969,11.5299865540758,0,0,0,4.33277429626912,4.15586613396231,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,2.71914464507811,0.144599356919912,0,0,0,0,3.72783522436244,0,0,16.6047085885584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.363553430315,28.0317600663357,0,0,0.38660238396628,3.63030344322017,10.6741461045538,11.9842144450912,23.2519240156811,14.3288090609889,8.54539709920916,12.5342577385925,9.94316844307513,13.4822911298133,21.8299430373441,24.8926591567959,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87642439752332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,18.0718118710507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0.209088296014469,0.87345025498471,0,0.0826534557253359,0,5.4438288782553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,1.33348036680969,1.44224540067226,0.64183841918363,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.320125762024346,0.459483751644906,0.952587382566147,0,0.192909220463705,0,0.147198920134397,1.02860775715625,0.532427418478012,0.715308569841963,0.581385666529314,0.564656282491984,0.592302255241736,0.548783918618318,0.526139422875686,0.407412341537585,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.464810523557898,0.964533054905707,0,0.233931608445408,1.07435527024149,0,0,0 | ||
|short_description=p4@Ppp1r14d | |short_description=p4@Ppp1r14d | ||
}} | }} |
Latest revision as of 14:03, 25 September 2015
Short description: | p4@Ppp1r14d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ppp1r14d_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -8bp_to_ENSMUST00000076084_5end |
EntrezGene: | Ppp1r14d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.83e-18 | 9 |
epithelial cell of alimentary canal | 1.83e-18 | 9 |
brush border epithelial cell | 2.52e-13 | 6 |
gut absorptive cell | 2.52e-13 | 6 |
enterocyte | 2.52e-13 | 6 |
columnar/cuboidal epithelial cell | 2.61e-11 | 7 |
epithelial cell | 2.03e-10 | 25 |
endo-epithelial cell | 2.24e-10 | 15 |
M cell of gut | 9.93e-08 | 3 |
endodermal cell | 2.34e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.35e-52 | 31 |
gastrointestinal system | 1.54e-34 | 47 |
mucosa | 6.51e-31 | 15 |
intestinal mucosa | 7.95e-27 | 13 |
wall of intestine | 7.95e-27 | 13 |
gastrointestinal system mucosa | 7.95e-27 | 13 |
organ component layer | 2.39e-20 | 24 |
epithelium of mucosa | 1.83e-18 | 9 |
gastrointestinal system epithelium | 1.83e-18 | 9 |
intestinal epithelium | 1.83e-18 | 9 |
simple columnar epithelium | 8.73e-15 | 11 |
digestive system | 6.39e-12 | 116 |
digestive tract | 6.39e-12 | 116 |
primitive gut | 6.39e-12 | 116 |
endoderm-derived structure | 1.35e-11 | 118 |
endoderm | 1.35e-11 | 118 |
presumptive endoderm | 1.35e-11 | 118 |
subdivision of digestive tract | 3.90e-10 | 114 |
small intestine | 1.19e-09 | 4 |
ileal mucosa | 1.65e-07 | 3 |
ileum | 1.65e-07 | 3 |
mucosa of small intestine | 1.65e-07 | 3 |
wall of small intestine | 1.65e-07 | 3 |