FFCP PHASE1:Hg19::chr12:100867695..100867706,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9971 | |EntrezGene=9971 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7967 | |HGNC=7967 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RI1,F8VYG8 | |UniProt=Q96RI1,F8VYG8 | ||
|association_with_transcript=1bp_to_ENST00000321046,ENST00000392986,ENST00000549996_5end | |association_with_transcript=1bp_to_ENST00000321046,ENST00000392986,ENST00000549996_5end | ||
|cluster_id=chr12:100867695..100867706,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_6_at_NR1H4_5end | |description=CAGE_peak_6_at_NR1H4_5end | ||
|id=chr12:100867695..100867706,+ | |id=chr12:100867695..100867706,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.50e-20!12;CL:0000417!5.50e-20!12;CL:0000668!5.50e-20!12;CL:0000414!5.50e-20!12;CL:0000412!5.50e-20!12;CL:0000182!5.50e-20!12;CL:0002622!3.00e-11!3;CL:0002195!6.26e-09!2;CL:0002571!6.26e-09!2;CL:1000487!6.93e-08!2 | |ontology_enrichment_celltype=CL:0000181!5.50e-20!12;CL:0000417!5.50e-20!12;CL:0000668!5.50e-20!12;CL:0000414!5.50e-20!12;CL:0000412!5.50e-20!12;CL:0000182!5.50e-20!12;CL:0002622!3.00e-11!3;CL:0002195!6.26e-09!2;CL:0002571!6.26e-09!2;CL:1000487!6.93e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.26e-39;12!CL:0002195;4.45e-20;2!CL:0002571;4.45e-20;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.41e-39,12;CL:0002195,4.04e-20,2;CL:0002571,4.04e-20,2;CL:0000223,1.73e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.46e-41;11!UBERON:0009497;4.35e-35;13!UBERON:0003104;6.43e-18;31!UBERON:0001041;7.48e-15;30!UBERON:0006242;1.21e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.54e-32!19;UBERON:0006925!2.54e-32!19;UBERON:0008836!2.54e-32!19;UBERON:0009854!3.36e-30!23;UBERON:0009497!1.14e-27!25;UBERON:0000015!1.14e-27!25;UBERON:0002423!1.14e-27!25;UBERON:0006235!1.14e-27!25;UBERON:0004161!1.14e-27!25;UBERON:0008835!1.78e-27!22;UBERON:0003894!1.78e-27!22;UBERON:0009856!2.62e-26!26;UBERON:0007499!8.59e-24!25;UBERON:0003929!5.02e-23!54;UBERON:0002530!7.86e-23!59;UBERON:0005057!9.38e-23!26;UBERON:0002368!1.87e-21!35;UBERON:0002365!1.43e-18!31;UBERON:0002330!1.43e-18!31;UBERON:0005172!3.30e-18!55;UBERON:0005173!3.30e-18!55;UBERON:0004921!3.72e-18!129;UBERON:0004185!3.72e-18!129;UBERON:0005911!1.12e-16!82;UBERON:0002417!5.72e-16!61;UBERON:0000916!5.72e-16!61;UBERON:0000949!7.43e-16!45;UBERON:0001007!3.87e-15!155;UBERON:0001555!3.87e-15!155;UBERON:0007026!3.87e-15!155;UBERON:0001046!2.63e-13!19;UBERON:0004119!2.84e-13!169;UBERON:0000925!2.84e-13!169;UBERON:0006595!2.84e-13!169;UBERON:0000077!8.48e-13!130;UBERON:0005256!3.94e-12!143;UBERON:0000162!3.26e-11!14;UBERON:0001353!3.26e-11!14;UBERON:0000163!3.26e-11!14;UBERON:0006866!3.26e-11!14;UBERON:0000164!3.26e-11!14;UBERON:0000931!3.26e-11!14;UBERON:0002367!7.55e-11!11;UBERON:0010147!7.55e-11!11;UBERON:0009846!7.55e-11!11;UBERON:0003353!7.55e-11!11;UBERON:0004902!7.55e-11!11;UBERON:0003820!7.55e-11!11;UBERON:0009847!7.55e-11!11;UBERON:0000490!1.38e-10!138;UBERON:0003104!1.73e-10!238;UBERON:0009142!1.73e-10!238;UBERON:0004122!2.11e-10!15;UBERON:0005177!2.14e-10!107;UBERON:0000481!2.32e-10!347;UBERON:0003937!6.81e-10!12;UBERON:0005399!6.81e-10!12;UBERON:0002100!1.10e-09!216;UBERON:0003101!7.17e-09!22;UBERON:0000079!7.17e-09!22;UBERON:0009569!1.44e-08!113 | |ontology_enrichment_uberon=UBERON:0002107!2.54e-32!19;UBERON:0006925!2.54e-32!19;UBERON:0008836!2.54e-32!19;UBERON:0009854!3.36e-30!23;UBERON:0009497!1.14e-27!25;UBERON:0000015!1.14e-27!25;UBERON:0002423!1.14e-27!25;UBERON:0006235!1.14e-27!25;UBERON:0004161!1.14e-27!25;UBERON:0008835!1.78e-27!22;UBERON:0003894!1.78e-27!22;UBERON:0009856!2.62e-26!26;UBERON:0007499!8.59e-24!25;UBERON:0003929!5.02e-23!54;UBERON:0002530!7.86e-23!59;UBERON:0005057!9.38e-23!26;UBERON:0002368!1.87e-21!35;UBERON:0002365!1.43e-18!31;UBERON:0002330!1.43e-18!31;UBERON:0005172!3.30e-18!55;UBERON:0005173!3.30e-18!55;UBERON:0004921!3.72e-18!129;UBERON:0004185!3.72e-18!129;UBERON:0005911!1.12e-16!82;UBERON:0002417!5.72e-16!61;UBERON:0000916!5.72e-16!61;UBERON:0000949!7.43e-16!45;UBERON:0001007!3.87e-15!155;UBERON:0001555!3.87e-15!155;UBERON:0007026!3.87e-15!155;UBERON:0001046!2.63e-13!19;UBERON:0004119!2.84e-13!169;UBERON:0000925!2.84e-13!169;UBERON:0006595!2.84e-13!169;UBERON:0000077!8.48e-13!130;UBERON:0005256!3.94e-12!143;UBERON:0000162!3.26e-11!14;UBERON:0001353!3.26e-11!14;UBERON:0000163!3.26e-11!14;UBERON:0006866!3.26e-11!14;UBERON:0000164!3.26e-11!14;UBERON:0000931!3.26e-11!14;UBERON:0002367!7.55e-11!11;UBERON:0010147!7.55e-11!11;UBERON:0009846!7.55e-11!11;UBERON:0003353!7.55e-11!11;UBERON:0004902!7.55e-11!11;UBERON:0003820!7.55e-11!11;UBERON:0009847!7.55e-11!11;UBERON:0000490!1.38e-10!138;UBERON:0003104!1.73e-10!238;UBERON:0009142!1.73e-10!238;UBERON:0004122!2.11e-10!15;UBERON:0005177!2.14e-10!107;UBERON:0000481!2.32e-10!347;UBERON:0003937!6.81e-10!12;UBERON:0005399!6.81e-10!12;UBERON:0002100!1.10e-09!216;UBERON:0003101!7.17e-09!22;UBERON:0000079!7.17e-09!22;UBERON:0009569!1.44e-08!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.56e-70;19!UBERON:0006925;1.56e-70;19!UBERON:0002423;2.24e-62;25!UBERON:0002365;2.99e-41;31!UBERON:0002330;2.99e-41;31!UBERON:0002368;3.65e-37;33!UBERON:0000949;1.02e-23;43!UBERON:0005172;1.21e-21;52!UBERON:0005173;1.21e-21;52!UBERON:0002417;2.31e-15;58!UBERON:0000916;2.31e-15;58!UBERON:0002530;6.20e-15;57!UBERON:0001007;3.19e-09;81!UBERON:0009569;1.59e-07;110 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.05e-70,19;UBERON:0006925,1.05e-70,19;UBERON:0008836,1.05e-70,19;UBERON:0009497,1.89e-62,25;UBERON:0000015,1.89e-62,25;UBERON:0002423,1.89e-62,25;UBERON:0006235,1.89e-62,25;UBERON:0004161,1.89e-62,25;UBERON:0008835,7.72e-61,22;UBERON:0003894,7.72e-61,22;UBERON:0009854,4.03e-58,23;UBERON:0007499,2.45e-53,25;UBERON:0009856,3.21e-51,26;UBERON:0002365,1.11e-42,31;UBERON:0002330,1.11e-42,31;UBERON:0002368,1.32e-37,35;UBERON:0005172,2.22e-32,54;UBERON:0005173,2.22e-32,54;UBERON:0002417,6.28e-29,60;UBERON:0000916,6.28e-29,60;UBERON:0000949,7.47e-29,45;UBERON:0003929,7.03e-28,54;UBERON:0002530,1.42e-21,59;UBERON:0005911,1.28e-20,82;UBERON:0005177,7.33e-19,101;UBERON:0009569,8.95e-17,112;UBERON:0001041,1.43e-16,87;UBERON:0004921,1.66e-13,118;UBERON:0001007,2.69e-12,145;UBERON:0001555,2.69e-12,145;UBERON:0007026,2.69e-12,145;UBERON:0003914,9.28e-12,117;UBERON:0005256,3.43e-11,122;UBERON:0001048,5.03e-11,160;UBERON:0004119,6.37e-11,160;UBERON:0000925,6.37e-11,160;UBERON:0006595,6.37e-11,160;UBERON:0003104,1.91e-09,160;UBERON:0009142,1.91e-09,160;UBERON:0000490,7.48e-09,148;UBERON:0000025,1.04e-08,192;UBERON:0002100,2.27e-08,199;UBERON:0011216,4.99e-07,223 | |||
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|short_description=p6@NR1H4 | |short_description=p6@NR1H4 | ||
}} | }} |
Latest revision as of 07:23, 25 September 2015
Short description: | p6@NR1H4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NR1H4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 1bp_to_ENST00000321046, ENST00000392986, ENST00000549996_5end |
EntrezGene: | NR1H4 |
HGNC: | 7967 |
UniProt: | Q96RI1F8VYG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.41e-39 | 12 |
hepatic stem cell | 4.04e-20 | 2 |
hepatic mesenchymal stem cell | 4.04e-20 | 2 |
endodermal cell | 1.73e-07 | 58 |