FFCP PHASE1:Hg19::chr16:2390692..2390703,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=21 | |EntrezGene=21 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33 | |HGNC=33 | ||
|TSSclassifier=strong | |||
|UniProt=Q4LE27,Q6P5P9,Q99758 | |UniProt=Q4LE27,Q6P5P9,Q99758 | ||
|association_with_transcript=43bp_to_ENST00000382381,NM_001089,uc002cpy.1,uc010bsk.1,uc010bsl.1_5end | |association_with_transcript=43bp_to_ENST00000382381,NM_001089,uc002cpy.1,uc010bsk.1,uc010bsl.1_5end | ||
|cluster_id=chr16:2390692..2390703,- | |||
|coexpression_cluster_id=C2367 | |coexpression_cluster_id=C2367 | ||
|description=CAGE_peak_5_at_ABCA3_5end | |description=CAGE_peak_5_at_ABCA3_5end | ||
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|ontology_enrichment_celltype=CL:0002139!5.99e-13!24;CL:0000071!5.79e-10!18;CL:0002546!5.79e-10!18;CL:0000115!3.23e-09!35;CL:0000213!6.94e-09!57;CL:0000215!6.94e-09!57;CL:0002078!1.08e-07!44 | |ontology_enrichment_celltype=CL:0002139!5.99e-13!24;CL:0000071!5.79e-10!18;CL:0002546!5.79e-10!18;CL:0000115!3.23e-09!35;CL:0000213!6.94e-09!57;CL:0000215!6.94e-09!57;CL:0002078!1.08e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.35e-16;24!CL:0000071;3.14e-11;18!CL:0000115;2.91e-09;36!CL:1000413;2.98e-07;9 | |ontology_enrichment_celltype_v019=CL:0002139;4.35e-16;24!CL:0000071;3.14e-11;18!CL:0000115;2.91e-09;36!CL:1000413;2.98e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.84e-17,24;CL:0000071,7.12e-12,18;CL:0002546,7.12e-12,18;CL:0000115,1.27e-11,36;CL:0002078,5.11e-08,45;CL:1000413,1.59e-07,9;CL:0000213,5.16e-07,58;CL:0000215,5.16e-07,58;CL:0005020,8.72e-07,6;CL:0002138,8.72e-07,6;CL:0005022,8.72e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.32e-12;82!CL:0002546;3.14e-11;18 | |ontology_enrichment_development_v019=UBERON:0006601;1.32e-12;82!CL:0002546;3.14e-11;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.09e-31!115;UBERON:0001049!1.33e-29!57;UBERON:0005068!1.33e-29!57;UBERON:0006241!1.33e-29!57;UBERON:0007135!1.33e-29!57;UBERON:0000073!3.07e-29!94;UBERON:0001016!3.07e-29!94;UBERON:0005743!6.01e-29!86;UBERON:0001017!1.65e-28!82;UBERON:0000955!1.70e-25!69;UBERON:0006238!1.70e-25!69;UBERON:0002780!2.67e-23!41;UBERON:0001890!2.67e-23!41;UBERON:0006240!2.67e-23!41;UBERON:0002616!3.39e-23!59;UBERON:0003080!3.07e-22!42;UBERON:0003075!6.71e-22!86;UBERON:0007284!6.71e-22!86;UBERON:0002346!9.42e-22!90;UBERON:0001893!9.63e-20!34;UBERON:0002020!1.22e-19!34;UBERON:0003528!1.22e-19!34;UBERON:0002791!5.81e-19!33;UBERON:0001869!2.80e-18!32;UBERON:0000025!2.31e-17!194;UBERON:0003056!1.37e-15!61;UBERON:0004111!1.42e-15!241;UBERON:0000477!1.46e-14!286;UBERON:0000956!2.72e-14!25;UBERON:0000203!2.72e-14!25;UBERON:0000153!9.67e-14!129;UBERON:0007811!9.67e-14!129;UBERON:0002619!1.27e-13!22;UBERON:0000033!1.18e-12!123;UBERON:0001950!2.19e-12!20;UBERON:0000924!9.58e-12!173;UBERON:0006601!9.58e-12!173;UBERON:0004121!1.44e-11!169;UBERON:0001986!5.79e-10!18;UBERON:0004638!5.79e-10!18;UBERON:0004852!5.79e-10!18;UBERON:0000483!6.60e-09!309;UBERON:0003076!1.79e-08!15;UBERON:0003057!1.79e-08!15;UBERON:0000119!2.07e-08!312;UBERON:0000064!2.47e-08!219;UBERON:0000487!6.74e-08!22;UBERON:0000489!1.02e-07!32;UBERON:0004732!2.03e-07!13;UBERON:0006914!3.67e-07!25;UBERON:0002420!7.32e-07!9;UBERON:0007245!7.32e-07!9;UBERON:0010009!7.32e-07!9;UBERON:0010011!7.32e-07!9;UBERON:0000454!7.32e-07!9;UBERON:0002308!7.64e-07!9;UBERON:0000125!7.64e-07!9;UBERON:0004733!7.88e-07!12;UBERON:0002028!7.88e-07!12;UBERON:0007277!7.88e-07!12 | |ontology_enrichment_uberon=UBERON:0007023!3.09e-31!115;UBERON:0001049!1.33e-29!57;UBERON:0005068!1.33e-29!57;UBERON:0006241!1.33e-29!57;UBERON:0007135!1.33e-29!57;UBERON:0000073!3.07e-29!94;UBERON:0001016!3.07e-29!94;UBERON:0005743!6.01e-29!86;UBERON:0001017!1.65e-28!82;UBERON:0000955!1.70e-25!69;UBERON:0006238!1.70e-25!69;UBERON:0002780!2.67e-23!41;UBERON:0001890!2.67e-23!41;UBERON:0006240!2.67e-23!41;UBERON:0002616!3.39e-23!59;UBERON:0003080!3.07e-22!42;UBERON:0003075!6.71e-22!86;UBERON:0007284!6.71e-22!86;UBERON:0002346!9.42e-22!90;UBERON:0001893!9.63e-20!34;UBERON:0002020!1.22e-19!34;UBERON:0003528!1.22e-19!34;UBERON:0002791!5.81e-19!33;UBERON:0001869!2.80e-18!32;UBERON:0000025!2.31e-17!194;UBERON:0003056!1.37e-15!61;UBERON:0004111!1.42e-15!241;UBERON:0000477!1.46e-14!286;UBERON:0000956!2.72e-14!25;UBERON:0000203!2.72e-14!25;UBERON:0000153!9.67e-14!129;UBERON:0007811!9.67e-14!129;UBERON:0002619!1.27e-13!22;UBERON:0000033!1.18e-12!123;UBERON:0001950!2.19e-12!20;UBERON:0000924!9.58e-12!173;UBERON:0006601!9.58e-12!173;UBERON:0004121!1.44e-11!169;UBERON:0001986!5.79e-10!18;UBERON:0004638!5.79e-10!18;UBERON:0004852!5.79e-10!18;UBERON:0000483!6.60e-09!309;UBERON:0003076!1.79e-08!15;UBERON:0003057!1.79e-08!15;UBERON:0000119!2.07e-08!312;UBERON:0000064!2.47e-08!219;UBERON:0000487!6.74e-08!22;UBERON:0000489!1.02e-07!32;UBERON:0004732!2.03e-07!13;UBERON:0006914!3.67e-07!25;UBERON:0002420!7.32e-07!9;UBERON:0007245!7.32e-07!9;UBERON:0010009!7.32e-07!9;UBERON:0010011!7.32e-07!9;UBERON:0000454!7.32e-07!9;UBERON:0002308!7.64e-07!9;UBERON:0000125!7.64e-07!9;UBERON:0004733!7.88e-07!12;UBERON:0002028!7.88e-07!12;UBERON:0007277!7.88e-07!12 | ||
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| ||
|short_description=p5@ABCA3 | |short_description=p5@ABCA3 | ||
}} | }} |
Latest revision as of 06:49, 25 September 2015
Short description: | p5@ABCA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABCA3_5end |
Coexpression cluster: | C2367_occipital_temporal_brain_postcentral_parietal_paracentral_insula |
Association with transcript: | 43bp_to_ENST00000382381, NM_001089, uc002cpy.1, uc010bsk.1, uc010bsl.1_5end |
EntrezGene: | ABCA3 |
HGNC: | 33 |
UniProt: | Q4LE27Q6P5P9Q99758 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.84e-17 | 24 |
blood vessel endothelial cell | 7.12e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.12e-12 | 18 |
endothelial cell | 1.27e-11 | 36 |
meso-epithelial cell | 5.11e-08 | 45 |
endothelial cell of artery | 1.59e-07 | 9 |
lining cell | 5.16e-07 | 58 |
barrier cell | 5.16e-07 | 58 |
lymphangioblast | 8.72e-07 | 6 |
endothelial cell of lymphatic vessel | 8.72e-07 | 6 |
vascular lymphangioblast | 8.72e-07 | 6 |