FFCP PHASE1:Hg19::chrX:46937834..46937852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9104 | |EntrezGene=9104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9989 | |HGNC=9989 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENST00000469346_5end | |association_with_transcript=10bp_to_ENST00000469346_5end | ||
|cluster_id=chrX:46937834..46937852,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_RGN_5end | |description=CAGE_peak_1_at_RGN_5end | ||
|id=chrX:46937834..46937852,+ | |id=chrX:46937834..46937852,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.69e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.56e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.40e-11;82!UBERON:0003104;7.60e-10;31!UBERON:0004161;7.25e-09;11!UBERON:0009497;3.18e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.97e-53!115;UBERON:0001049!4.77e-32!57;UBERON:0005068!4.77e-32!57;UBERON:0006241!4.77e-32!57;UBERON:0007135!4.77e-32!57;UBERON:0003075!5.05e-27!86;UBERON:0007284!5.05e-27!86;UBERON:0002616!1.88e-25!59;UBERON:0002346!1.29e-24!90;UBERON:0005743!4.91e-24!86;UBERON:0003080!2.64e-23!42;UBERON:0002780!6.63e-23!41;UBERON:0001890!6.63e-23!41;UBERON:0006240!6.63e-23!41;UBERON:0001017!2.55e-22!82;UBERON:0004111!1.25e-21!241;UBERON:0000073!3.03e-21!94;UBERON:0001016!3.03e-21!94;UBERON:0000475!6.31e-21!365;UBERON:0000025!9.98e-21!194;UBERON:0000955!1.43e-20!69;UBERON:0006238!1.43e-20!69;UBERON:0000481!6.46e-20!347;UBERON:0000477!8.77e-19!286;UBERON:0000033!3.29e-18!123;UBERON:0002020!3.32e-18!34;UBERON:0003528!3.32e-18!34;UBERON:0001893!3.37e-18!34;UBERON:0003056!4.94e-18!61;UBERON:0000153!1.10e-17!129;UBERON:0007811!1.10e-17!129;UBERON:0002791!1.40e-17!33;UBERON:0001869!8.79e-17!32;UBERON:0000483!4.04e-16!309;UBERON:0000119!1.57e-15!312;UBERON:0004121!9.01e-15!169;UBERON:0000924!9.32e-14!173;UBERON:0006601!9.32e-14!173;UBERON:0000956!1.77e-12!25;UBERON:0000203!1.77e-12!25;UBERON:0000468!1.86e-12!659;UBERON:0002619!3.19e-12!22;UBERON:0000062!4.17e-12!511;UBERON:0000467!1.59e-11!625;UBERON:0000480!2.15e-11!626;UBERON:0001950!6.82e-11!20;UBERON:0003076!8.28e-10!15;UBERON:0003057!8.28e-10!15;UBERON:0004732!1.70e-08!13;UBERON:0004733!1.03e-07!12;UBERON:0002028!1.03e-07!12;UBERON:0007277!1.03e-07!12;UBERON:0000922!1.52e-07!612;UBERON:0002308!2.31e-07!9;UBERON:0000125!2.31e-07!9;UBERON:0002420!2.42e-07!9;UBERON:0007245!2.42e-07!9;UBERON:0010009!2.42e-07!9;UBERON:0010011!2.42e-07!9;UBERON:0000454!2.42e-07!9;UBERON:0000064!4.55e-07!219;UBERON:0002298!5.01e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.76e-22;53!UBERON:0002616;3.76e-22;53!UBERON:0007023;5.24e-22;114!UBERON:0002780;1.20e-20;41!UBERON:0001890;1.20e-20;41!UBERON:0003528;1.16e-18;34!UBERON:0002020;1.16e-18;34!UBERON:0001893;1.35e-18;34!UBERON:0002791;2.76e-18;32!UBERON:0001869;8.34e-18;32!UBERON:0002619;3.15e-17;22!UBERON:0001950;6.76e-15;20!UBERON:0000956;1.26e-14;25!UBERON:0000203;1.26e-14;25!UBERON:0001017;1.88e-13;75!UBERON:0000955;3.02e-13;68!UBERON:0004732;3.68e-11;13!UBERON:0001016;6.05e-11;83!UBERON:0000125;4.96e-10;9!UBERON:0002308;4.96e-10;9!UBERON:0002420;6.75e-10;9!UBERON:0007245;6.75e-10;9!UBERON:0010009;6.75e-10;9!UBERON:0010011;6.75e-10;9!UBERON:0000454;6.75e-10;9!UBERON:0004733;7.67e-10;12!UBERON:0002028;7.67e-10;12!UBERON:0002298;1.72e-09;6!UBERON:0000200;2.60e-08;6!UBERON:0001894;6.31e-08;7!UBERON:0000349;9.00e-08;5!UBERON:0002107;1.19e-07;19!UBERON:0006925;1.19e-07;19!UBERON:0001871;1.36e-07;6!UBERON:0009663;1.60e-07;7!UBERON:0011216;2.07e-07;132!UBERON:0002784;3.86e-07;4!UBERON:0002368;6.10e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.78e-77,114;UBERON:0001049,2.33e-41,56;UBERON:0005068,2.33e-41,56;UBERON:0006241,2.33e-41,56;UBERON:0007135,2.33e-41,56;UBERON:0000073,1.31e-37,53;UBERON:0002616,1.31e-37,53;UBERON:0003075,1.85e-33,82;UBERON:0007284,1.85e-33,82;UBERON:0002346,3.55e-31,86;UBERON:0001017,1.04e-29,81;UBERON:0000955,3.46e-29,68;UBERON:0006238,3.46e-29,68;UBERON:0002780,1.01e-28,41;UBERON:0001890,1.01e-28,41;UBERON:0003080,1.01e-28,41;UBERON:0006240,1.01e-28,41;UBERON:0001016,8.08e-27,89;UBERON:0010371,2.99e-24,104;UBERON:0011216,1.44e-22,223;UBERON:0003528,1.66e-22,34;UBERON:0002020,1.66e-22,34;UBERON:0001893,1.69e-22,34;UBERON:0010314,1.53e-21,132;UBERON:0004111,9.61e-21,240;UBERON:0000025,1.19e-20,192;UBERON:0003056,1.98e-20,61;UBERON:0002791,3.43e-20,32;UBERON:0001869,3.80e-20,32;UBERON:0002619,3.85e-17,22;UBERON:0004121,7.20e-16,171;UBERON:0000924,7.20e-16,171;UBERON:0006601,7.20e-16,171;UBERON:0001950,7.58e-15,20;UBERON:0000956,1.50e-14,25;UBERON:0000203,1.50e-14,25;UBERON:0003076,1.36e-13,15;UBERON:0003057,1.36e-13,15;UBERON:0000483,2.24e-12,306;UBERON:0000119,4.72e-12,309;UBERON:0004732,2.62e-11,13;UBERON:0004733,5.64e-10,12;UBERON:0002028,5.64e-10,12;UBERON:0007277,5.64e-10,12;UBERON:0000125,7.91e-10,9;UBERON:0002308,7.91e-10,9;UBERON:0002420,8.55e-10,9;UBERON:0007245,8.55e-10,9;UBERON:0010009,8.55e-10,9;UBERON:0010011,8.55e-10,9;UBERON:0000454,8.55e-10,9;UBERON:0002298,1.24e-09,6;UBERON:0000200,2.55e-08,6;UBERON:0000349,7.90e-08,5;UBERON:0001894,8.81e-08,7;UBERON:0006222,8.81e-08,7;UBERON:0002107,1.12e-07,19;UBERON:0006925,1.12e-07,19;UBERON:0008836,1.12e-07,19;UBERON:0001871,1.27e-07,6;UBERON:0009663,2.29e-07,7;UBERON:0002368,2.66e-07,35;UBERON:0002784,4.40e-07,4;UBERON:0002530,5.49e-07,59;UBERON:0000479,7.10e-07,773 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.495065411840187,0,0,0,0,0,0.738726348460727,0.204000691244253,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.0843174571537,0,1.01392563272577,0,1.45990461090791,0.189069634328136,0,0.087834785693126,17.8786438054378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.809364721840658,0.280901613404497,0.408308342509787,0.245668634623536,1.44656093646072,1.18800285728205,0.494533858557114,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0.612975591598039,0.45071417671979,0.226864366320042,0.538168907066586,0.640672166455702,1.05965950579781,0.900273288253207,0.412210116953756,2.06112432036503,0.930584281657949,0.506328996723799,0.194874010322397,0.504867548488229,0.736399189138395,0.484938170456436,0.355009592516614,0.302256294682921,1.01736355386293,0,0,0,0,0,0.232387885739037,0.518305275076852,0.504641701751257,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,105.20667890212,60.9352874340128,43.7184530944239,0,14.5126357480874,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.771622122786426,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.579125226670317,0,0.358121926479791,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0.184369168541703,0.434418072340414,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0,0,0,0,0.462629081407967,0.532685175939381,0.574890092096664,0.519254429183621,0.348631135379878,12.0859449591622,0,0,0.229628896329213,0,0.393373244878272,0,0.462092022626489,0,0,0.211103257785751,0,0,0,0,0.541892875087706,1.50506932156456,0.509752546090077,0,0.223874754722178,0,0,1.53870075069834,0.328014645699706,0.325378394664303,60.8972378838039,0,0,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.644521469209642,0.145016693914229,0.340906509664404,0,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0.272999822815972,0,0,0,1.32687795048244,1.75380354101505,0,0,0,0,0,0,0.0982490410131212,0,0,1.68886108238131,0.658589785919804,0.379473173765715,0,0.0962221127255121,0,0,56.0155614621836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,2.98244294329889,4.3607519087259,0,0,0,5.57894367102995,0.276283915531148,0,0,0,0.311039587661807,0.449341755736634,0,0,1.97286811273867,0,0,4.84666373047609,2.41197055220813,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,3.25610384288601,4.5774520895125,6.85591411573593,8.27533333069933,4.38770794307945,0,0,2.30850775511391,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,5.65412285735763,0,2.98578579323551,0.884575645033392,4.27721101453538,0,0,0,5.45949177143484,0.802577647298789,2.34264445725339,0,0,0,1.57833761139756,7.25944296291983,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,6.46488672495512,0,0,0,0,1.26085721434945,0.0882561266915003,1.12990370390266,0,0,3.16553979779394,0,0.561111741760736,1.06726497369676,0,0,0,0.343189995723929,0,0.49701014226173,0.942776138467182,0,0,0,0,4.20294202096853,3.42263447229983,0,0.429765441419957,0,4.46851842035607,7.10397314436219,4.30723814746088,1.39775300349294,1.28767814440971,3.12440040418622,0.940568614814168,0,11.6495949527454,8.35101732456571,8.07675412135431,9.16688196416914,1.57483970423598,0,2.38568906942791,5.44813624446302,0.160753148465019,0,0,0,0,3.64497339948148,0,17.6524784350204,6.71418728127976,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0,73.2761168390412,38.4269977845442,4.13705460356962,3.43804764530994,0,0,9.39729230595713,5.65935498358797,12.0129326050687,0,0,0,0,3.80812462358632,4.0110383043632,6.73960268879615,2.62298104567844,0,3.54427271986794,1.34228891392159,3.505346059782,6.88091034828085,3.77158775225298,4.84351942942791,0,0,0,0,0,0,0,0.149254802886874,0,0,0.947015026375446,0.754703705257725,0,0.457680136793847,0.302461847526478,0,0.443565449968902,0,0,0.155262956876259,0,0.53168342911599,1.043490123623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| ||
|short_description=p1@RGN | |short_description=p1@RGN | ||
}} | }} |
Latest revision as of 05:18, 25 September 2015
Short description: | p1@RGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGN_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 10bp_to_ENST00000469346_5end |
EntrezGene: | RGN |
HGNC: | 9989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.56e-08 | 12 |