FFCP PHASE1:Hg19::chr22:46373004..46373016,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:46373004..46373016,- to FFCP PHASE1:Hg19::chr22:46373004..46373016,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7477 | |EntrezGene=7477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12787 | |HGNC=12787 | ||
|TSSclassifier=strong | |||
|UniProt=P56706 | |UniProt=P56706 | ||
|association_with_transcript=0bp_to_ENST00000339464,NM_058238,uc003bgo.2_5end | |||
|cluster_id=chr22:46373004..46373016,- | |||
|coexpression_cluster_id=C4107 | |||
|description=CAGE_peak_3_at_WNT7B_5end | |||
|id=chr22:46373004..46373016,- | |||
|ontology_enrichment_celltype=CL:0000066!5.14e-43!254;CL:0002076!1.21e-21!43;CL:0000223!1.18e-16!59;CL:0002368!1.00e-13!13;CL:0002202!4.32e-10!9;CL:0002632!4.32e-10!9;CL:0000082!6.42e-10!19;CL:1000507!6.66e-09!12;CL:1000494!6.66e-09!12;CL:1000497!8.62e-08!18;CL:0002518!8.62e-08!18;CL:0000076!1.00e-07!62;CL:0002251!1.29e-07!21;CL:1000449!1.53e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.29e-22;42!CL:0002368;1.21e-15;13!CL:0002202;1.40e-11;9!CL:0002632;1.40e-11;9!CL:0002251;1.37e-10;20!CL:0002621;5.55e-08;3!CL:0000307;1.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.37e-40,253;CL:0002076,1.73e-30,42;CL:0000223,3.79e-26,58;CL:0002368,2.13e-15,13;CL:0002202,2.24e-11,9;CL:0002632,2.24e-11,9;CL:0002251,1.62e-10,20;CL:0000076,1.20e-09,63;CL:0002621,6.09e-08,3;CL:0000068,1.29e-07,3;CL:0000069,1.29e-07,3;CL:0000307,1.29e-07,3;CL:0000377,1.29e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;4.71e-15;58!CL:0000377;1.36e-07;3 | |||
|ontology_enrichment_disease=DOID:305!4.40e-41!106;DOID:0050687!1.07e-29!143;DOID:162!3.97e-18!235;DOID:14566!3.45e-17!239;DOID:1749!9.91e-15!14;DOID:299!2.27e-13!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.57e-23;14!DOID:299;2.22e-11;25!DOID:305;2.46e-09;106!DOID:170;9.11e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.89e-31,106;DOID:1749,2.78e-23,14;DOID:0050687,3.91e-21,143;DOID:162,1.50e-12,235;DOID:14566,5.01e-12,239;DOID:299,2.27e-11,25;DOID:7,1.84e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.89e-24!72;UBERON:0000065!1.33e-23!53;UBERON:0004119!3.59e-22!169;UBERON:0000925!3.59e-22!169;UBERON:0006595!3.59e-22!169;UBERON:0008947!7.35e-21!38;UBERON:0003258!7.35e-21!38;UBERON:0000072!1.25e-19!46;UBERON:0001007!4.18e-18!155;UBERON:0001555!4.18e-18!155;UBERON:0007026!4.18e-18!155;UBERON:0000077!1.67e-14!130;UBERON:0001041!1.97e-13!98;UBERON:0004921!2.42e-13!129;UBERON:0004185!2.42e-13!129;UBERON:0005178!3.19e-13!34;UBERON:0002224!3.19e-13!34;UBERON:0005177!1.13e-12!107;UBERON:0005181!1.25e-12!35;UBERON:0000464!2.72e-12!104;UBERON:0001008!8.67e-12!45;UBERON:0005911!1.58e-11!82;UBERON:0006554!3.48e-11!44;UBERON:0000064!6.32e-11!219;UBERON:0002048!1.87e-10!22;UBERON:0000117!1.87e-10!22;UBERON:0000171!1.87e-10!22;UBERON:0000170!1.87e-10!22;UBERON:0005597!1.87e-10!22;UBERON:0000118!1.87e-10!22;UBERON:0009569!1.95e-10!113;UBERON:0004807!6.11e-10!28;UBERON:0004802!6.42e-10!19;UBERON:0000115!6.42e-10!19;UBERON:0000466!6.73e-10!126;UBERON:0000915!6.86e-10!52;UBERON:0005153!6.97e-10!37;UBERON:0001737!1.30e-09!9;UBERON:0009773!6.66e-09!12;UBERON:0001231!6.66e-09!12;UBERON:0004810!6.66e-09!12;UBERON:0001557!7.25e-09!19;UBERON:0000062!9.89e-09!511;UBERON:0003064!9.90e-09!37;UBERON:0000058!1.01e-08!26;UBERON:0007196!1.47e-08!14;UBERON:0001558!1.47e-08!14;UBERON:0000161!1.57e-08!35;UBERON:0005157!1.59e-08!51;UBERON:0000481!2.92e-08!347;UBERON:0003104!3.12e-08!238;UBERON:0009142!3.12e-08!238;UBERON:0000475!1.07e-07!365;UBERON:0000063!1.18e-07!97;UBERON:0004211!1.53e-07!16;UBERON:0001285!1.53e-07!16;UBERON:0007684!1.53e-07!16;UBERON:0003220!1.53e-07!16;UBERON:0004208!1.53e-07!16;UBERON:0003729!2.00e-07!5;UBERON:0000489!2.69e-07!32;UBERON:0002113!3.14e-07!27;UBERON:0003918!3.14e-07!27;UBERON:0005095!3.14e-07!27;UBERON:0007687!3.14e-07!27;UBERON:0006555!6.39e-07!17;UBERON:0005103!6.39e-07!17;UBERON:0000083!6.39e-07!17;UBERON:0009201!6.39e-07!17;UBERON:0004819!6.39e-07!17;UBERON:0006553!6.39e-07!17;UBERON:0003074!6.39e-07!17;UBERON:0003060!6.39e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;4.89e-11;13!UBERON:0003343;1.69e-10;4!UBERON:0004785;1.69e-10;4!UBERON:0000344;2.17e-10;20!UBERON:0000065;3.88e-09;44!UBERON:0000486;7.06e-09;12!UBERON:0000072;1.66e-08;37!UBERON:0001004;2.80e-08;65!UBERON:0001737;3.61e-08;9!UBERON:0001557;3.61e-08;9!UBERON:0001949;5.55e-08;3!UBERON:0000365;8.41e-08;5!UBERON:0006554;1.50e-07;30!UBERON:0001008;1.50e-07;30!UBERON:0004807;5.66e-07;22!UBERON:0000974;5.84e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.25e-14,160;UBERON:0000925,6.25e-14,160;UBERON:0006595,6.25e-14,160;UBERON:0001004,1.08e-13,74;UBERON:0000065,2.90e-11,54;UBERON:0003729,6.02e-11,13;UBERON:0001007,1.17e-10,145;UBERON:0001555,1.17e-10,145;UBERON:0007026,1.17e-10,145;UBERON:0003343,1.89e-10,4;UBERON:0004785,1.89e-10,4;UBERON:0000344,2.15e-10,20;UBERON:0008947,1.69e-09,38;UBERON:0003258,1.69e-09,38;UBERON:0000072,2.08e-09,47;UBERON:0000365,4.04e-08,5;UBERON:0001737,5.31e-08,9;UBERON:0001949,6.09e-08,3;UBERON:0004921,1.57e-07,118;UBERON:0005177,3.28e-07,101;UBERON:0001041,6.26e-07,87;UBERON:0006554,7.94e-07,47;UBERON:0005910,9.47e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,4.83152132908242,1.36373060295417,2.29443676311203,0,0,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,1.0647612003586,1.51726221070292,1.20505514941741,1.43382164552112,0.653638332277218,0.949082476444386,0.808987848960987,1.56977172100277,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0.219500570817251,2.24803506515239,1.00528972411631,2.22212268380471,0,0,0,0.231860809950154,0,0,0,0,2.37061319387782,0.858486162094873,0,0,0,1.87467667973554,1.34385702559088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,1.93370076765382,0,0,0,5.86559496779635,0.539107359730903,7.84349769176855,8.76835347919564,0.73886140225013,0,0,0,0,0.541892875087706,1.50506932156456,0.764628819135115,0.831076008928724,5.59686886805446,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.15699440752685,1.53752053892085,0.255225424989168,2.52894452138875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92444225451024,3.35151137767894,1.08890984861323,0,1.72202149068492,0,3.54744122829341,2.98640420269047,0,0,0,0,0,0,0,0,0,0,5.88096518354476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,1.70338495076131,0,0.307240764308458,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0.844016498463076,0.222617410045812,0,0,0,0,0,0.306806047506464,0,0,2.69605053441981,1.9692329214317,0,0.493217028184668,0,0,0,0.0927680981618513,0,2.86470537193757,1.39935999993913,0,5.23449862113298,1.27126825146383,0.945550727071745,0.344743373241465,0,0,0,0,0,0,0,0,0.21787692703798,8.3654246567162,0.846452843541768,0,1.1528195219403,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,2.12202650606892,0,0,0,0,0,0,0,0,0,0,0,0,2.73930466504926,0,0,0,0.91821828489147,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,1.21491816834592,4.40965788364699,1.82824333818845,0,0.171986032471617,0.290268993867255,0.584714536689484,0.656923656425674,1.64881328030313,0,0.225980740780532,0.274083849293502,0,0,0.586654148204409,1.44285876452761,0.85381197895741,0.39961921916426,0,0,0,0.864328787928898,0.124252535565433,0.942776138467182,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,2.32140586367385,0.121499113316049,8.38586718998165,0.0788057072991982,0.367182116944987,0.105600336519406,0.179287339332845,3.07064315711112,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0.855434189421647,0.704815022316672,0.320362237703084,0.314408610199332,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,1.74972571146949,0,0,0.941063278792687,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,1.07220795687463,0,0,1.389134845943,0,0.358177682162975,1.54400723580486,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,0,5.70542733068293,0,0,0,0,0,1.11903606175556,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,1.27592034051333,7.55006229425538,3.4851433719119,3.35024431835981,0,0,0,0.0752103283492573,0,0,2.61906694481422,0.163771917510097,2.80926563812386,0,0,0,0.0634158101939068,0,0,0,0,8.30455779657369,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,1.41832609060762,0.889851215136553,0.156986185701028,0,0,0,0,1.9110067515482,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,2.2910686854405,1.24082554265728,1.91107787795487,2.01339777236026,0.196300467230486,0.365753774946808,0,0,0,0.971421986118279,0.233939463462106,1.19370465096821,0,0,0,1.66059127923341,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,2.47026410200984,0.802413666891683,0,0.458729283404541,0,0.157771562193185,0.135982980381829,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0.213233981900981,0.476128862927481,0.0645889098360061,0,0.224263725161227,0.0636471582781649,0,1.08858373948481,0.342233301085281,0.875576689189638,0.932388670104793,0.99798106963804,1.79087190944144,0.213454691755431,0,5.12003652007545,0,0.122241444182866,0,0.665756774185513,0,0 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| ||
|short_description=p3@WNT7B | |||
}} | }} |
Latest revision as of 04:48, 25 September 2015
Short description: | p3@WNT7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WNT7B_5end |
Coexpression cluster: | C4107_Renal_pharyngeal_oral_cervical_tubular_keratoacanthoma_bronchial |
Association with transcript: | 0bp_to_ENST00000339464, NM_058238, uc003bgo.2_5end |
EntrezGene: | WNT7B |
HGNC: | 12787 |
UniProt: | P56706 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.37e-40 | 253 |
endo-epithelial cell | 1.73e-30 | 42 |
endodermal cell | 3.79e-26 | 58 |
respiratory epithelial cell | 2.13e-15 | 13 |
epithelial cell of tracheobronchial tree | 2.24e-11 | 9 |
epithelial cell of lower respiratory tract | 2.24e-11 | 9 |
epithelial cell of alimentary canal | 1.62e-10 | 20 |
squamous epithelial cell | 1.20e-09 | 63 |
gingival epithelial cell | 6.09e-08 | 3 |
duct epithelial cell | 1.29e-07 | 3 |
branched duct epithelial cell | 1.29e-07 | 3 |
tracheal epithelial cell | 1.29e-07 | 3 |
tracheoblast | 1.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.25e-14 | 160 |
endoderm | 6.25e-14 | 160 |
presumptive endoderm | 6.25e-14 | 160 |
respiratory system | 1.08e-13 | 74 |
respiratory tract | 2.90e-11 | 54 |
mouth mucosa | 6.02e-11 | 13 |
digestive system | 1.17e-10 | 145 |
digestive tract | 1.17e-10 | 145 |
primitive gut | 1.17e-10 | 145 |
mucosa of oral region | 1.89e-10 | 4 |
respiratory system mucosa | 1.89e-10 | 4 |
mucosa | 2.15e-10 | 20 |
respiratory primordium | 1.69e-09 | 38 |
endoderm of foregut | 1.69e-09 | 38 |
segment of respiratory tract | 2.08e-09 | 47 |
urothelium | 4.04e-08 | 5 |
larynx | 5.31e-08 | 9 |
gingival epithelium | 6.09e-08 | 3 |
subdivision of digestive tract | 1.57e-07 | 118 |
trunk region element | 3.28e-07 | 101 |
foregut | 6.26e-07 | 87 |
urinary system structure | 7.94e-07 | 47 |
transitional epithelium | 9.47e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.89e-31 | 106 |
squamous cell carcinoma | 2.78e-23 | 14 |
cell type cancer | 3.91e-21 | 143 |
cancer | 1.50e-12 | 235 |
disease of cellular proliferation | 5.01e-12 | 239 |
adenocarcinoma | 2.27e-11 | 25 |
disease of anatomical entity | 1.84e-07 | 39 |