FFCP PHASE1:Hg19::chr11:111794915..111794928,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91894 | |EntrezGene=91894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30531 | |HGNC=30531 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENST00000529012_5end | |association_with_transcript=-40bp_to_ENST00000529012_5end | ||
|cluster_id=chr11:111794915..111794928,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_6_at_C11orf52_5end | |description=CAGE_peak_6_at_C11orf52_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!8.57e-19!3;CL:0002580!2.52e-18!3;CL:0000197!6.93e-16!6;CL:0000098!6.93e-16!6;CL:0002167!6.93e-16!6;CL:0002537!6.54e-12!5;CL:0002334!3.64e-08!12;CL:0002581!1.27e-07!1 | |ontology_enrichment_celltype=CL:0002541!8.57e-19!3;CL:0002580!2.52e-18!3;CL:0000197!6.93e-16!6;CL:0000098!6.93e-16!6;CL:0002167!6.93e-16!6;CL:0002537!6.54e-12!5;CL:0002334!3.64e-08!12;CL:0002581!1.27e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.53e-44;3!CL:0002581;7.06e-34;1!CL:0000349;2.49e-28;19!CL:0002537;1.59e-27;5!CL:0002623;2.89e-12;3!CL:0000134;1.42e-08;55!CL:0000622;7.01e-08;5!CL:0000154;8.97e-07;6 | |ontology_enrichment_celltype_v019=CL:0002541;1.53e-44;3!CL:0002581;7.06e-34;1!CL:0000349;2.49e-28;19!CL:0002537;1.59e-27;5!CL:0002623;2.89e-12;3!CL:0000134;1.42e-08;55!CL:0000622;7.01e-08;5!CL:0000154;8.97e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-44,3;CL:0002581,7.06e-34,1;CL:0000349,2.32e-28,19;CL:0002537,1.59e-27,5;CL:0002623,3.24e-12,3;CL:0000622,7.49e-08,5;CL:0000154,9.49e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!9.81e-27!14;UBERON:0000158!9.81e-27!14;UBERON:0003124!2.51e-21!7;UBERON:0000476!8.57e-19!3;UBERON:0000920!8.57e-19!3;UBERON:0000478!4.24e-15!24;UBERON:0000310!1.46e-09!10;UBERON:0001723!3.77e-09!3;UBERON:0001033!3.77e-09!3;UBERON:0010056!3.77e-09!3;UBERON:0004923!8.91e-09!57;UBERON:0001443!1.06e-08!11;UBERON:0000305!1.24e-08!7;UBERON:0004871!1.32e-07!8;UBERON:0005418!1.54e-07!1;UBERON:0001389!1.54e-07!1;UBERON:0000026!1.54e-07!1;UBERON:0008784!1.54e-07!1;UBERON:0006058!1.54e-07!1;UBERON:0003663!1.54e-07!1;UBERON:0001383!1.54e-07!1;UBERON:0004256!1.54e-07!1;UBERON:0002529!1.54e-07!1;UBERON:0004708!1.54e-07!1;UBERON:0002101!1.54e-07!1;UBERON:0004709!1.54e-07!1;UBERON:0003661!1.54e-07!1;UBERON:0002471!1.54e-07!1;UBERON:0004357!1.54e-07!1;UBERON:0009872!1.54e-07!1;UBERON:0004347!1.54e-07!1;UBERON:0005420!1.54e-07!1;UBERON:0005732!1.54e-07!1;UBERON:0006057!1.54e-07!1;UBERON:0000978!1.54e-07!1;UBERON:0002103!1.54e-07!1;UBERON:0001665!1.54e-07!1;UBERON:0003823!1.54e-07!1;UBERON:0000154!1.54e-07!1;UBERON:0005733!1.54e-07!1;UBERON:0005730!1.54e-07!1;UBERON:0001987!7.20e-07!4;UBERON:0004340!7.20e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!9.81e-27!14;UBERON:0000158!9.81e-27!14;UBERON:0003124!2.51e-21!7;UBERON:0000476!8.57e-19!3;UBERON:0000920!8.57e-19!3;UBERON:0000478!4.24e-15!24;UBERON:0000310!1.46e-09!10;UBERON:0001723!3.77e-09!3;UBERON:0001033!3.77e-09!3;UBERON:0010056!3.77e-09!3;UBERON:0004923!8.91e-09!57;UBERON:0001443!1.06e-08!11;UBERON:0000305!1.24e-08!7;UBERON:0004871!1.32e-07!8;UBERON:0005418!1.54e-07!1;UBERON:0001389!1.54e-07!1;UBERON:0000026!1.54e-07!1;UBERON:0008784!1.54e-07!1;UBERON:0006058!1.54e-07!1;UBERON:0003663!1.54e-07!1;UBERON:0001383!1.54e-07!1;UBERON:0004256!1.54e-07!1;UBERON:0002529!1.54e-07!1;UBERON:0004708!1.54e-07!1;UBERON:0002101!1.54e-07!1;UBERON:0004709!1.54e-07!1;UBERON:0003661!1.54e-07!1;UBERON:0002471!1.54e-07!1;UBERON:0004357!1.54e-07!1;UBERON:0009872!1.54e-07!1;UBERON:0004347!1.54e-07!1;UBERON:0005420!1.54e-07!1;UBERON:0005732!1.54e-07!1;UBERON:0006057!1.54e-07!1;UBERON:0000978!1.54e-07!1;UBERON:0002103!1.54e-07!1;UBERON:0001665!1.54e-07!1;UBERON:0003823!1.54e-07!1;UBERON:0000154!1.54e-07!1;UBERON:0005733!1.54e-07!1;UBERON:0005730!1.54e-07!1;UBERON:0001987!7.20e-07!4;UBERON:0004340!7.20e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.61e-53;10!UBERON:0000158;4.61e-53;10!UBERON:0003124;1.53e-44;3!UBERON:0000920;1.53e-44;3!UBERON:0000478;1.38e-22;24!UBERON:0000305;5.35e-20;7!UBERON:0005406;1.07e-17;2!UBERON:0004923;2.86e-07;55!UBERON:0001044;8.97e-07;6!UBERON:0003293;8.97e-07;6!UBERON:0003294;8.97e-07;6!UBERON:0010047;8.97e-07;6!UBERON:0003408;8.97e-07;6!UBERON:0000167;8.97e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0005631;4.61e-53;10!UBERON:0000158;4.61e-53;10!UBERON:0003124;1.53e-44;3!UBERON:0000920;1.53e-44;3!UBERON:0000478;1.38e-22;24!UBERON:0000305;5.35e-20;7!UBERON:0005406;1.07e-17;2!UBERON:0004923;2.86e-07;55!UBERON:0001044;8.97e-07;6!UBERON:0003293;8.97e-07;6!UBERON:0003294;8.97e-07;6!UBERON:0010047;8.97e-07;6!UBERON:0003408;8.97e-07;6!UBERON:0000167;8.97e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.22e-44,3;UBERON:0005631,3.38e-38,14;UBERON:0000158,3.38e-38,14;UBERON:0000478,1.30e-22,24;UBERON:0000305,5.35e-20,7;UBERON:0003124,7.84e-20,7;UBERON:0005406,1.07e-17,2;UBERON:0004871,1.22e-17,8;UBERON:0004923,1.32e-08,66;UBERON:0001044,9.49e-07,6;UBERON:0003293,9.49e-07,6;UBERON:0003294,9.49e-07,6;UBERON:0010047,9.49e-07,6;UBERON:0000167,9.49e-07,6 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292311015483596,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.92359005739301,0.593929361665277,11.0577852755724,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,1.91400695839152,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0.684466602170562,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292311015483596,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.92359005739301,0.593929361665277,11.0577852755724,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,1.91400695839152,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0.684466602170562,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@C11orf52 | |short_description=p6@C11orf52 | ||
}} | }} |
Latest revision as of 04:20, 25 September 2015
Short description: | p6@C11orf52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C11orf52_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -40bp_to_ENST00000529012_5end |
EntrezGene: | C11orf52 |
HGNC: | 30531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.22e-44 | 3 |
perirenal preadipocyte | 7.06e-34 | 1 |
extraembryonic cell | 2.32e-28 | 19 |
amnion mesenchymal stem cell | 1.59e-27 | 5 |
acinar cell of salivary gland | 3.24e-12 | 3 |
acinar cell | 7.49e-08 | 5 |
protein secreting cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.22e-44 | 3 |
extraembryonic membrane | 3.38e-38 | 14 |
membranous layer | 3.38e-38 | 14 |
extraembryonic structure | 1.30e-22 | 24 |
amnion | 5.35e-20 | 7 |
chorion | 7.84e-20 | 7 |
perirenal fat | 1.07e-17 | 2 |
somatic layer of lateral plate mesoderm | 1.22e-17 | 8 |
organ component layer | 1.32e-08 | 66 |
saliva-secreting gland | 9.49e-07 | 6 |
gland of oral region | 9.49e-07 | 6 |
gland of foregut | 9.49e-07 | 6 |
oral gland | 9.49e-07 | 6 |
oral cavity | 9.49e-07 | 6 |