FFCP PHASE1:Hg19::chr7:110731476..110731516,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:110731476..110731516,+
|short_description=p3@LRRN3
|description=CAGE_peak_3_at_LRRN3_5end
|association_with_transcript=326bp_to_ENST00000464835_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54674 | |EntrezGene=54674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17200 | |HGNC=17200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=326bp_to_ENST00000464835_5end | |||
|cluster_id=chr7:110731476..110731516,+ | |||
|coexpression_cluster_id=C1605 | |||
|description=CAGE_peak_3_at_LRRN3_5end | |||
|id=chr7:110731476..110731516,+ | |||
|ontology_enrichment_celltype=CL:0000625!1.07e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.69e-13;11!CL:0000791;1.45e-07;18!CL:0000789;1.45e-07;18!CL:0002419;1.45e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.69e-13,11;CL:0000791,1.01e-07,18;CL:0000789,1.01e-07,18;CL:0002420,1.01e-07,18;CL:0002419,1.01e-07,18;CL:0000790,1.01e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.30e-12;3!UBERON:0010122;9.31e-09;2!CL:0000790;1.45e-07;18!UBERON:0006601;2.28e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;4.72e-47;32!UBERON:0002791;2.66e-43;32!UBERON:0001893;8.06e-41;34!UBERON:0001950;1.20e-40;20!UBERON:0003528;8.63e-38;34!UBERON:0002020;8.63e-38;34!UBERON:0002619;8.46e-37;22!UBERON:0000956;3.87e-32;25!UBERON:0000203;3.87e-32;25!UBERON:0002780;1.80e-29;41!UBERON:0001890;1.80e-29;41!UBERON:0000073;9.70e-25;53!UBERON:0002616;9.70e-25;53!UBERON:0002420;6.63e-21;9!UBERON:0007245;6.63e-21;9!UBERON:0010009;6.63e-21;9!UBERON:0010011;6.63e-21;9!UBERON:0000454;6.63e-21;9!UBERON:0000955;2.26e-17;68!UBERON:0001017;2.50e-17;75!UBERON:0000369;3.94e-16;4!UBERON:0002435;3.94e-16;4!UBERON:0000204;3.94e-16;4!UBERON:0001871;2.67e-14;6!UBERON:0009663;2.67e-14;7!UBERON:0001016;5.24e-14;83!UBERON:0001870;1.53e-13;3!UBERON:0002021;2.35e-13;5!UBERON:0005383;1.30e-12;3!UBERON:0005382;1.30e-12;3!UBERON:0000200;1.71e-11;6!UBERON:0000125;4.61e-11;9!UBERON:0002308;4.61e-11;9!UBERON:0002702;1.09e-09;2!UBERON:0001876;9.31e-09;2!UBERON:0001873;9.31e-09;2!UBERON:0004733;4.87e-08;12!UBERON:0002028;4.87e-08;12!UBERON:0001872;5.01e-08;5!UBERON:0000349;1.47e-07;5!UBERON:0007023;1.66e-07;114!UBERON:0004732;2.13e-07;13!UBERON:0002680;3.22e-07;9!UBERON:0001895;3.22e-07;9 | |||
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| ||
|short_description=p3@LRRN3 | |||
}} | }} |
Latest revision as of 03:45, 25 September 2015
Short description: | p3@LRRN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRN3_5end |
Coexpression cluster: | C1605_CD4_temporal_occipital_duodenum_Neural_mycosis_medial |
Association with transcript: | 326bp_to_ENST00000464835_5end |
EntrezGene: | LRRN3 |
HGNC: | 17200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.69e-13 | 11 |
mature alpha-beta T cell | 1.01e-07 | 18 |
alpha-beta T cell | 1.01e-07 | 18 |
immature T cell | 1.01e-07 | 18 |
mature T cell | 1.01e-07 | 18 |
immature alpha-beta T cell | 1.01e-07 | 18 |