FFCP PHASE1:Hg19::chr16:21289585..21289596,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:21289585..21289596,-
|short_description=p4@CRYM
|description=CAGE_peak_4_at_CRYM_5end
|association_with_transcript=44bp_to_ENST00000396023,ENST00000415987...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1428 | |EntrezGene=1428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2418 | |HGNC=2418 | ||
|TSSclassifier=strong | |||
|UniProt=Q14894 | |UniProt=Q14894 | ||
|association_with_transcript=44bp_to_ENST00000396023,ENST00000415987_5end | |||
|cluster_id=chr16:21289585..21289596,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_4_at_CRYM_5end | |||
|id=chr16:21289585..21289596,- | |||
|ontology_enrichment_celltype=CL:0002322!1.08e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,8.08e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.15e-12;3!UBERON:0006601;6.33e-11;82!UBERON:0010122;4.18e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.32e-51!115;UBERON:0002780!8.26e-39!41;UBERON:0001890!8.26e-39!41;UBERON:0006240!8.26e-39!41;UBERON:0001869!3.00e-38!32;UBERON:0001893!7.61e-38!34;UBERON:0003080!1.28e-37!42;UBERON:0002791!2.59e-36!33;UBERON:0001049!5.41e-36!57;UBERON:0005068!5.41e-36!57;UBERON:0006241!5.41e-36!57;UBERON:0007135!5.41e-36!57;UBERON:0002616!2.53e-34!59;UBERON:0001017!4.47e-34!82;UBERON:0000955!5.72e-34!69;UBERON:0006238!5.72e-34!69;UBERON:0005743!3.00e-33!86;UBERON:0002020!1.13e-32!34;UBERON:0003528!1.13e-32!34;UBERON:0002619!1.75e-32!22;UBERON:0001950!1.07e-29!20;UBERON:0003075!1.07e-28!86;UBERON:0007284!1.07e-28!86;UBERON:0000073!1.30e-28!94;UBERON:0001016!1.30e-28!94;UBERON:0000956!8.13e-28!25;UBERON:0000203!8.13e-28!25;UBERON:0002346!9.43e-27!90;UBERON:0003056!2.37e-25!61;UBERON:0000033!1.10e-18!123;UBERON:0000153!3.95e-17!129;UBERON:0007811!3.95e-17!129;UBERON:0004121!3.66e-15!169;UBERON:0000924!1.92e-14!173;UBERON:0006601!1.92e-14!173;UBERON:0002420!7.46e-12!9;UBERON:0007245!7.46e-12!9;UBERON:0010009!7.46e-12!9;UBERON:0010011!7.46e-12!9;UBERON:0000454!7.46e-12!9;UBERON:0000025!8.97e-12!194;UBERON:0000200!9.38e-11!6;UBERON:0000064!2.01e-10!219;UBERON:0001871!2.61e-10!7;UBERON:0004111!6.00e-10!241;UBERON:0001872!3.22e-09!5;UBERON:0000349!4.60e-09!5;UBERON:0009663!7.11e-09!7;UBERON:0002021!9.04e-09!5;UBERON:0000369!4.45e-08!4;UBERON:0002435!4.45e-08!4;UBERON:0000204!4.45e-08!4;UBERON:0010082!4.45e-08!4;UBERON:0000481!4.75e-08!347;UBERON:0000477!1.46e-07!286;UBERON:0000062!1.91e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.59e-71;32!UBERON:0002619;1.61e-69;22!UBERON:0001950;2.18e-69;20!UBERON:0002791;1.11e-66;32!UBERON:0001893;5.11e-65;34!UBERON:0003528;1.89e-61;34!UBERON:0002020;1.89e-61;34!UBERON:0000956;7.13e-61;25!UBERON:0000203;7.13e-61;25!UBERON:0002780;4.02e-47;41!UBERON:0001890;4.02e-47;41!UBERON:0000073;2.96e-34;53!UBERON:0002616;2.96e-34;53!UBERON:0000955;1.67e-29;68!UBERON:0001017;7.08e-26;75!UBERON:0000200;3.14e-23;6!UBERON:0002420;3.02e-21;9!UBERON:0007245;3.02e-21;9!UBERON:0010009;3.02e-21;9!UBERON:0010011;3.02e-21;9!UBERON:0000454;3.02e-21;9!UBERON:0001872;8.29e-20;5!UBERON:0001016;1.63e-19;83!UBERON:0001871;1.79e-19;6!UBERON:0002021;1.06e-18;5!UBERON:0000369;6.03e-17;4!UBERON:0002435;6.03e-17;4!UBERON:0000204;6.03e-17;4!UBERON:0009663;1.79e-14;7!UBERON:0005383;4.55e-13;3!UBERON:0005382;4.55e-13;3!UBERON:0000349;4.67e-13;5!UBERON:0007023;6.59e-13;114!UBERON:0001870;7.19e-13;3!UBERON:0000125;3.52e-11;9!UBERON:0002308;3.52e-11;9!UBERON:0001873;4.18e-09;2!UBERON:0002702;4.71e-09;2!UBERON:0011216;5.19e-09;132!UBERON:0001876;5.86e-09;2!UBERON:0002771;1.61e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.82e-80,32;UBERON:0001893,4.50e-75,34;UBERON:0002791,6.77e-74,32;UBERON:0002619,2.67e-69,22;UBERON:0003528,2.73e-69,34;UBERON:0002020,2.73e-69,34;UBERON:0001950,3.83e-69,20;UBERON:0002780,2.57e-66,41;UBERON:0001890,2.57e-66,41;UBERON:0003080,2.57e-66,41;UBERON:0006240,2.57e-66,41;UBERON:0000073,1.93e-62,53;UBERON:0002616,1.93e-62,53;UBERON:0000956,1.11e-60,25;UBERON:0000203,1.11e-60,25;UBERON:0001049,9.59e-59,56;UBERON:0005068,9.59e-59,56;UBERON:0006241,9.59e-59,56;UBERON:0007135,9.59e-59,56;UBERON:0000955,5.78e-57,68;UBERON:0006238,5.78e-57,68;UBERON:0001017,6.01e-50,81;UBERON:0001016,3.17e-44,89;UBERON:0003056,1.28e-42,61;UBERON:0003075,6.61e-38,82;UBERON:0007284,6.61e-38,82;UBERON:0007023,2.03e-36,114;UBERON:0002346,8.31e-36,86;UBERON:0010371,2.41e-28,104;UBERON:0010314,3.76e-24,132;UBERON:0000200,2.75e-23,6;UBERON:0002420,3.26e-21,9;UBERON:0007245,3.26e-21,9;UBERON:0010009,3.26e-21,9;UBERON:0010011,3.26e-21,9;UBERON:0000454,3.26e-21,9;UBERON:0001872,1.18e-19,5;UBERON:0001871,1.74e-19,6;UBERON:0004121,2.17e-19,171;UBERON:0000924,2.17e-19,171;UBERON:0006601,2.17e-19,171;UBERON:0002021,1.36e-18,5;UBERON:0011216,1.89e-18,223;UBERON:0000369,5.81e-17,4;UBERON:0002435,5.81e-17,4;UBERON:0000204,5.81e-17,4;UBERON:0010082,5.81e-17,4;UBERON:0000025,2.47e-16,192;UBERON:0009663,1.90e-14,7;UBERON:0005383,4.21e-13,3;UBERON:0005382,4.21e-13,3;UBERON:0000349,4.75e-13,5;UBERON:0001870,7.35e-13,3;UBERON:0004111,1.88e-11,240;UBERON:0000125,3.68e-11,9;UBERON:0002308,3.68e-11,9;UBERON:0001873,3.87e-09,2;UBERON:0010122,3.87e-09,2;UBERON:0002702,4.72e-09,2;UBERON:0001876,5.98e-09,2;UBERON:0002771,1.30e-08,2;UBERON:0000483,2.69e-07,306;UBERON:0000119,3.75e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,2.93618594685469,1.14681968437569,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,1.19245312152671,8.57992366170192,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.795178609928912,0.813357600086629,0.414644220061482,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.15403067420883,0,1.46139224653261,0.633309773357254,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,3.51673541026282,0.111308705022906,0,0,0.398495976502139,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0.197286811273867,0,0,3.87733098438087,6.02992638052033,3.99227596002388,0,0,0,0,0,0,0,0,0,2.65722415744152,20.0190088118177,1.52581736317083,6.7453348558047,10.9352619012813,6.3621765174652,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.632994193584081,0.489698424477443,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,0.269604531922708,0,3.04543779442941,0.364909578431332,0,0,0,0,1.22429104652196,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,6.33107959558787,0,0,0.213452994739353,0,0.144090417154106,0.114536596165916,0.171594997861965,0,0,0,0.135904206073614,0,0,0,2.40168115483916,0.410716136675979,0,0,0,0.558564802544508,0.458320848023367,0.717873024576814,0.399358000997982,2.57535628881943,2.67805748930247,0.335917362433631,0,1.16495949527454,0,0,0.0674035438541849,0.295282444544246,0,0.795229689809303,2.58786471611994,0.482259445395058,0.825236619583403,0.415440338029185,0,0,4.9207140893,0.335434687599266,0.630445658393585,0.524545881349981,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,8.86068179966986,3.78281421196086,2.50381861413,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02865313705744,1.41696576325585,1.11743701340006,5.9483745629819,1.51243017733031,3.66533438060355,5.81312324274664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79516850790602,5.46754669029693,2.48024155801421,5.13668062570645,2.18789923607288,0,1.48863353516788,0,0,0,0,0.606965604236632,0.227662191351298,0,0.230467975111559,0,0.543757863814654,5.39336743215362,0.118193840883968,0,0.313972371402056,23.2531073075683,0,1.82631744101899,0,0,0.285906176706625,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,1.87151570769685,0,0,0,0,1.35866559210006,0.231522474323834,0,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,7.95500435233702,0.436350690340377,0,0,0,0,0,0,0,0.509944148709909,0,1.47031839255752,0,0.227336094654718,0.535928260312357,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0.404112318087525,0.717222053926764,0.665320713092027,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,2.93618594685469,1.14681968437569,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,1.19245312152671,8.57992366170192,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.795178609928912,0.813357600086629,0.414644220061482,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.15403067420883,0,1.46139224653261,0.633309773357254,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,3.51673541026282,0.111308705022906,0,0,0.398495976502139,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0.197286811273867,0,0,3.87733098438087,6.02992638052033,3.99227596002388,0,0,0,0,0,0,0,0,0,2.65722415744152,20.0190088118177,1.52581736317083,6.7453348558047,10.9352619012813,6.3621765174652,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.632994193584081,0.489698424477443,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,0.269604531922708,0,3.04543779442941,0.364909578431332,0,0,0,0,1.22429104652196,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,6.33107959558787,0,0,0.213452994739353,0,0.144090417154106,0.114536596165916,0.171594997861965,0,0,0,0.135904206073614,0,0,0,2.40168115483916,0.410716136675979,0,0,0,0.558564802544508,0.458320848023367,0.717873024576814,0.399358000997982,2.57535628881943,2.67805748930247,0.335917362433631,0,1.16495949527454,0,0,0.0674035438541849,0.295282444544246,0,0.795229689809303,2.58786471611994,0.482259445395058,0.825236619583403,0.415440338029185,0,0,4.9207140893,0.335434687599266,0.630445658393585,0.524545881349981,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,8.86068179966986,3.78281421196086,2.50381861413,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02865313705744,1.41696576325585,1.11743701340006,5.9483745629819,1.51243017733031,3.66533438060355,5.81312324274664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79516850790602,5.46754669029693,2.48024155801421,5.13668062570645,2.18789923607288,0,1.48863353516788,0,0,0,0,0.606965604236632,0.227662191351298,0,0.230467975111559,0,0.543757863814654,5.39336743215362,0.118193840883968,0,0.313972371402056,23.2531073075683,0,1.82631744101899,0,0,0.285906176706625,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,1.87151570769685,0,0,0,0,1.35866559210006,0.231522474323834,0,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,7.95500435233702,0.436350690340377,0,0,0,0,0,0,0,0.509944148709909,0,1.47031839255752,0,0.227336094654718,0.535928260312357,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0.404112318087525,0.717222053926764,0.665320713092027,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p4@CRYM | |||
}} | }} |
Latest revision as of 03:40, 25 September 2015
Short description: | p4@CRYM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CRYM_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 44bp_to_ENST00000396023, ENST00000415987_5end |
EntrezGene: | CRYM |
HGNC: | 2418 |
UniProt: | Q14894 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 8.08e-12 | 3 |