FFCP PHASE1:Hg19::chr3:141121847..141121868,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:141121847..141121868,+ to FFCP PHASE1:Hg19::chr3:141121847..141121868,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=253461 | |EntrezGene=253461 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26636 | |HGNC=26636 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAC4 | |UniProt=D6RAC4 | ||
|association_with_transcript=187bp_to_ENST00000513570,uc003ety.2_5end | |||
|cluster_id=chr3:141121847..141121868,+ | |||
|coexpression_cluster_id=C4287 | |||
|description=CAGE_peak_5_at_ZBTB38_5end | |||
|id=chr3:141121847..141121868,+ | |||
|ontology_enrichment_celltype=CL:0000057!7.65e-16!75;CL:0000055!1.84e-14!180;CL:0000680!1.44e-12!57;CL:0000056!1.44e-12!57;CL:0000355!1.44e-12!57;CL:0000187!8.09e-12!54;CL:0002620!1.27e-11!23;CL:0000192!1.48e-10!42;CL:0000514!1.48e-10!42;CL:0000183!4.89e-10!59;CL:0000393!4.01e-09!60;CL:0000211!4.01e-09!60;CL:0000359!6.29e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.30e-14;23!CL:0000057;6.02e-09;73!CL:0000192;6.22e-09;43!CL:0000359;4.59e-08;32!CL:0000187;9.24e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.53e-20,76;CL:0002620,7.35e-14,23;CL:0000680,1.95e-12,58;CL:0000056,1.95e-12,58;CL:0000355,1.95e-12,58;CL:0000187,5.22e-12,55;CL:0000723,1.27e-11,433;CL:0000192,1.57e-11,43;CL:0000514,1.57e-11,43;CL:0000048,3.24e-11,427;CL:0000034,2.02e-10,441;CL:0000393,2.28e-09,61;CL:0000211,2.28e-09,61;CL:0000359,1.87e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.22e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.22e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.88e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.05e-20!83;UBERON:0002329!7.05e-20!83;UBERON:0003077!7.05e-20!83;UBERON:0003059!7.05e-20!83;UBERON:0007282!7.05e-20!83;UBERON:0009618!7.05e-20!83;UBERON:0007285!7.05e-20!83;UBERON:0003102!4.48e-16!95;UBERON:0004290!8.09e-16!70;UBERON:0000486!1.56e-14!82;UBERON:0001134!1.05e-11!61;UBERON:0002036!1.05e-11!61;UBERON:0003082!1.05e-11!61;UBERON:0002385!1.15e-11!63;UBERON:0001015!1.15e-11!63;UBERON:0000383!1.15e-11!63;UBERON:0005256!3.45e-11!143;UBERON:0002097!5.69e-11!40;UBERON:0002199!1.98e-10!45;UBERON:0002416!1.98e-10!45;UBERON:0002100!1.21e-08!216;UBERON:0000475!1.37e-08!365;UBERON:0003104!1.24e-07!238;UBERON:0009142!1.24e-07!238;UBERON:0000481!4.86e-07!347;UBERON:0004872!5.71e-07!84;UBERON:0001637!7.68e-07!42;UBERON:0003509!7.68e-07!42;UBERON:0004572!7.68e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.63e-11;41!UBERON:0002199;4.83e-09;46!UBERON:0002416;4.83e-09;46!UBERON:0003102;2.57e-08;50!UBERON:0002067;2.50e-07;9!UBERON:0001828;2.78e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.23e-21,99;UBERON:0002329,9.80e-17,71;UBERON:0003059,9.80e-17,71;UBERON:0007282,9.80e-17,71;UBERON:0004290,9.80e-17,71;UBERON:0009618,9.80e-17,71;UBERON:0007524,2.01e-16,73;UBERON:0003077,3.32e-16,72;UBERON:0007285,3.32e-16,72;UBERON:0000486,1.38e-15,83;UBERON:0007503,6.24e-14,78;UBERON:0002097,1.01e-13,41;UBERON:0002199,4.92e-13,46;UBERON:0002416,4.92e-13,46;UBERON:0001134,5.78e-12,62;UBERON:0002036,5.78e-12,62;UBERON:0003082,5.78e-12,62;UBERON:0002385,1.43e-11,64;UBERON:0001015,1.43e-11,64;UBERON:0000383,1.43e-11,64;UBERON:0005256,3.03e-10,122;UBERON:0004923,5.60e-08,66;UBERON:0001828,2.33e-07,8;UBERON:0002067,2.78e-07,9;UBERON:0004016,2.78e-07,9;UBERON:0010083,2.78e-07,9 | |||
|phase1_expression=2.90685406832891,4.06790995392868,2.81908808191942,1.0007329835313,1.78784437770915,0,0,1.26343974685366,0.261185628199839,0.491467873003018,0.697801167972428,0.218441372130172,0,3.21792517696121,0.994192127183747,0.672325146451775,2.41077811209591,2.19093027116212,1.46379839637152,0.123121058076788,0,0,0,0,0.125542639594803,6.64796630007176,6.40384597709577,7.39881344348585,0,1.91914699048606,0.309632246632152,7.35536979583142,0.90361775633475,2.58827807116751,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0.447830948479849,1.6194683300949,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0,0.521482918420201,0.65156653411535,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,2.73069305631066,1.77901850772711,2.56038133539904,0.800791974072025,1.72425731986345,0.661044872784862,0.954053754535364,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0,2.00623794468814,0.32592226663359,0,0,4.56782873229212,1.76763544484902,0.886135578334485,2.97884250141517,6.91693126518646,6.11278933531428,0,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.226618685395132,1.53288197440768,0.68725489096526,1.51811815211702,3.82278497188916,5.85975108470777,7.60361635558699,4.21610333417764,4.47953139040464,4.99722906209383,4.49876778883632,5.74789597844733,2.01606743224732,1.33720097891754,0.724122019413995,2.43806866313962,2.01210257911091,1.66221330396589,0,0.50133791063589,0,0,0.486634870302636,0.378139268656271,0.443458794925128,0,0.851363990735132,1.09288586487763,0.370784442784429,2.27183175558278,3.65672448328461,1.32957960518865,0,0,0,0.79504962946682,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0.258416759169329,0.35576626268671,1.33888245105868,0.402829317109147,0,0,0,0,0.357198913136319,0,0.337834441449967,0,0.949265659568129,0,0,0,0.872188104285069,1.49091585508596,10.0038104215018,17.2131935057184,8.60509862246441,5.67469411517371,0,1.06748995729705,1.2333377420858,3.11211035399766,1.34710672069688,1.14423332179421,0.454072282934794,0,2.34321431833797,4.05808099879417,10.2684927878001,10.4614076386261,5.98915943083201,8.25552016277471,6.32028630160118,16.1281795291366,4.79053837515895,10.6425554611038,17.8200428592308,10.6324779589779,0,2.15585442544872,6.06010010234638,4.25402967564678,22.719257469703,3.95079858792754,3.67785354958824,5.10809400282429,1.70148274740032,8.43131287737651,9.61008249683553,11.6562545637759,2.70081986475962,9.06862257298262,4.63752972082133,5.58350568994769,7.25738228637445,3.41029518064195,9.59248342127635,15.0041334786948,3.07127507955743,3.19508633264953,3.12331504505685,7.79978724628243,5.9910864480622,10.9098448236334,18.0686895095072,0,0,0.116193942869518,0,0.252320850875628,0,12.5159625863853,9.00537313470039,6.90674606762403,11.6091982007995,13.7157101517221,2.24782920075703,1.34867752062481,2.41011029883482,2.53676137284506,1.96091499683166,2.60997681022206,1.61797569792197,2.5508790466295,1.92373578473195,0,1.40241773803446,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0,0,1.54411029268673,5.70701484124853,1.1240175325762,2.21163739305588,1.574003567695,6.51616610620649,1.03993478527958,0,0,0.939269553886573,0,0,0.951270761172991,0,0,0,0,0,8.43604505880993,6.38332087155666,13.6104093352691,1.70161193135412,0.871901815541886,0,67.4948635917443,0,0.414656231081544,0.144119953416961,0.25248486685276,0.571481048629521,0,0,0,0.616964956219941,0,0,0.672786506072164,1.30788020649984,1.6134422880609,7.23921608243556,7.15312891703765,2.535908257668,9.0418959638856,1.04007436911366,0,1.41849132023278,0.266422179016099,11.1522835053355,0,0,5.5375151329935,6.39705507736582,0.791951872933429,1.50719688529793,5.22920075160176,0.199945982364114,0,0,0,5.99062138728957,1.14861935834114,1.42636905040718,13.6094428267524,3.08214483825575,0.895304816199478,0.112085143993527,0.985153801009636,1.2937654491571,0.641715181398742,0,0,0.773288812777695,0.167516265334349,0,0,0,0,1.59498939234882,0.500170521059677,0.813795071099207,10.814484799602,8.74302045106093,18.6088849740043,15.4626667790381,0.601892199455438,2.27407504055985,0,4.64957918974806,0.921845842708516,55.2579788017007,0.587403472388222,0,0,0,0.426910231213777,0,0,0.907170879989041,2.23297027036899,3.52962538562544,1.40330047216537,3.97231362692673,9.72243773226737,1.93024705372329,0,7.24785560872481,1.24293207719189,7.96633413333949,7.2695620085707,5.57809816607804,0,2.80709058424599,0.828728900423067,8.72589806051011,24.9464900169202,13.899187985699,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.431831832204279,1.54227252690289,0.270946437543853,0,0,0,0,0,0,6.66770325302612,0.328014645699706,15.9435413385508,3.91555844261345,0,0,5.16838984196555,3.25030123018261,4.82051789532479,1.54673149267395,0.924291702687866,0.307007349452259,5.65129947186575,2.0409846524972,3.0453505721988,2.72725207731523,0.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| |phase1_expression=2.90685406832891,4.06790995392868,2.81908808191942,1.0007329835313,1.78784437770915,0,0,1.26343974685366,0.261185628199839,0.491467873003018,0.697801167972428,0.218441372130172,0,3.21792517696121,0.994192127183747,0.672325146451775,2.41077811209591,2.19093027116212,1.46379839637152,0.123121058076788,0,0,0,0,0.125542639594803,6.64796630007176,6.40384597709577,7.39881344348585,0,1.91914699048606,0.309632246632152,7.35536979583142,0.90361775633475,2.58827807116751,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0.447830948479849,1.6194683300949,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0,0.521482918420201,0.65156653411535,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,2.73069305631066,1.77901850772711,2.56038133539904,0.800791974072025,1.72425731986345,0.661044872784862,0.954053754535364,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0,2.00623794468814,0.32592226663359,0,0,4.56782873229212,1.76763544484902,0.886135578334485,2.97884250141517,6.91693126518646,6.11278933531428,0,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.226618685395132,1.53288197440768,0.68725489096526,1.51811815211702,3.82278497188916,5.85975108470777,7.60361635558699,4.21610333417764,4.47953139040464,4.99722906209383,4.49876778883632,5.74789597844733,2.01606743224732,1.33720097891754,0.724122019413995,2.43806866313962,2.01210257911091,1.66221330396589,0,0.50133791063589,0,0,0.486634870302636,0.378139268656271,0.443458794925128,0,0.851363990735132,1.09288586487763,0.370784442784429,2.27183175558278,3.65672448328461,1.32957960518865,0,0,0,0.79504962946682,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0.258416759169329,0.35576626268671,1.33888245105868,0.402829317109147,0,0,0,0,0.357198913136319,0,0.337834441449967,0,0.949265659568129,0,0,0,0.872188104285069,1.49091585508596,10.0038104215018,17.2131935057184,8.60509862246441,5.67469411517371,0,1.06748995729705,1.2333377420858,3.11211035399766,1.34710672069688,1.14423332179421,0.454072282934794,0,2.34321431833797,4.05808099879417,10.2684927878001,10.4614076386261,5.98915943083201,8.25552016277471,6.32028630160118,16.1281795291366,4.79053837515895,10.6425554611038,17.8200428592308,10.6324779589779,0,2.15585442544872,6.06010010234638,4.25402967564678,22.719257469703,3.95079858792754,3.67785354958824,5.10809400282429,1.70148274740032,8.43131287737651,9.61008249683553,11.6562545637759,2.70081986475962,9.06862257298262,4.63752972082133,5.58350568994769,7.25738228637445,3.41029518064195,9.59248342127635,15.0041334786948,3.07127507955743,3.19508633264953,3.12331504505685,7.79978724628243,5.9910864480622,10.9098448236334,18.0686895095072,0,0,0.116193942869518,0,0.252320850875628,0,12.5159625863853,9.00537313470039,6.90674606762403,11.6091982007995,13.7157101517221,2.24782920075703,1.34867752062481,2.41011029883482,2.53676137284506,1.96091499683166,2.60997681022206,1.61797569792197,2.5508790466295,1.92373578473195,0,1.40241773803446,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0,0,1.54411029268673,5.70701484124853,1.1240175325762,2.21163739305588,1.574003567695,6.51616610620649,1.03993478527958,0,0,0.939269553886573,0,0,0.951270761172991,0,0,0,0,0,8.43604505880993,6.38332087155666,13.6104093352691,1.70161193135412,0.871901815541886,0,67.4948635917443,0,0.414656231081544,0.144119953416961,0.25248486685276,0.571481048629521,0,0,0,0.616964956219941,0,0,0.672786506072164,1.30788020649984,1.6134422880609,7.23921608243556,7.15312891703765,2.535908257668,9.0418959638856,1.04007436911366,0,1.41849132023278,0.266422179016099,11.1522835053355,0,0,5.5375151329935,6.39705507736582,0.791951872933429,1.50719688529793,5.22920075160176,0.199945982364114,0,0,0,5.99062138728957,1.14861935834114,1.42636905040718,13.6094428267524,3.08214483825575,0.895304816199478,0.112085143993527,0.985153801009636,1.2937654491571,0.641715181398742,0,0,0.773288812777695,0.167516265334349,0,0,0,0,1.59498939234882,0.500170521059677,0.813795071099207,10.814484799602,8.74302045106093,18.6088849740043,15.4626667790381,0.601892199455438,2.27407504055985,0,4.64957918974806,0.921845842708516,55.2579788017007,0.587403472388222,0,0,0,0.426910231213777,0,0,0.907170879989041,2.23297027036899,3.52962538562544,1.40330047216537,3.97231362692673,9.72243773226737,1.93024705372329,0,7.24785560872481,1.24293207719189,7.96633413333949,7.2695620085707,5.57809816607804,0,2.80709058424599,0.828728900423067,8.72589806051011,24.9464900169202,13.899187985699,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.431831832204279,1.54227252690289,0.270946437543853,0,0,0,0,0,0,6.66770325302612,0.328014645699706,15.9435413385508,3.91555844261345,0,0,5.16838984196555,3.25030123018261,4.82051789532479,1.54673149267395,0.924291702687866,0.307007349452259,5.65129947186575,2.0409846524972,3.0453505721988,2.72725207731523,0.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| ||
|short_description=p5@ZBTB38 | |||
}} | }} |
Latest revision as of 03:31, 25 September 2015
Short description: | p5@ZBTB38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ZBTB38_5end |
Coexpression cluster: | C4287_Mast_Pancreatic_Prostate_Fibroblast_Hair_Olfactory_schwannoma |
Association with transcript: | 187bp_to_ENST00000513570, uc003ety.2_5end |
EntrezGene: | ZBTB38 |
HGNC: | 26636 |
UniProt: | D6RAC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.53e-20 | 76 |
skin fibroblast | 7.35e-14 | 23 |
muscle precursor cell | 1.95e-12 | 58 |
myoblast | 1.95e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.95e-12 | 58 |
muscle cell | 5.22e-12 | 55 |
somatic stem cell | 1.27e-11 | 433 |
smooth muscle cell | 1.57e-11 | 43 |
smooth muscle myoblast | 1.57e-11 | 43 |
multi fate stem cell | 3.24e-11 | 427 |
stem cell | 2.02e-10 | 441 |
electrically responsive cell | 2.28e-09 | 61 |
electrically active cell | 2.28e-09 | 61 |
vascular associated smooth muscle cell | 1.87e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.23e-21 | 99 |
somite | 9.80e-17 | 71 |
presomitic mesoderm | 9.80e-17 | 71 |
presumptive segmental plate | 9.80e-17 | 71 |
dermomyotome | 9.80e-17 | 71 |
trunk paraxial mesoderm | 9.80e-17 | 71 |
dense mesenchyme tissue | 2.01e-16 | 73 |
paraxial mesoderm | 3.32e-16 | 72 |
presumptive paraxial mesoderm | 3.32e-16 | 72 |
multilaminar epithelium | 1.38e-15 | 83 |
epithelial vesicle | 6.24e-14 | 78 |
skin of body | 1.01e-13 | 41 |
integument | 4.92e-13 | 46 |
integumental system | 4.92e-13 | 46 |
skeletal muscle tissue | 5.78e-12 | 62 |
striated muscle tissue | 5.78e-12 | 62 |
myotome | 5.78e-12 | 62 |
muscle tissue | 1.43e-11 | 64 |
musculature | 1.43e-11 | 64 |
musculature of body | 1.43e-11 | 64 |
trunk mesenchyme | 3.03e-10 | 122 |
organ component layer | 5.60e-08 | 66 |
gingiva | 2.33e-07 | 8 |
dermis | 2.78e-07 | 9 |
dermatome | 2.78e-07 | 9 |
future dermis | 2.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.88e-07 | 14 |