FFCP PHASE1:Hg19::chr2:227771404..227771431,+: Difference between revisions
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|id=chr2:227771404..227771431,+
|short_description=p2@RHBDD1
|description=CAGE_peak_2_at_RHBDD1_5end
|association_with_transcript=0bp_to_ENST00000409053_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84236 | |EntrezGene=84236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23081 | |HGNC=23081 | ||
|TSSclassifier=strong | |||
|UniProt=B9A054 | |UniProt=B9A054 | ||
|association_with_transcript=0bp_to_ENST00000409053_5end | |||
|cluster_id=chr2:227771404..227771431,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_2_at_RHBDD1_5end | |||
|id=chr2:227771404..227771431,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.19e-67!24;CL:0000826!2.19e-67!24;CL:0000236!8.28e-51!14;CL:0000542!2.09e-34!53;CL:0000051!2.09e-34!53;CL:0000838!1.08e-31!52;CL:0002087!4.61e-18!119;CL:0000738!1.89e-14!140;CL:0002031!9.78e-13!124;CL:0000037!1.17e-10!172;CL:0000566!1.17e-10!172;CL:0000988!9.46e-10!182;CL:0000785!1.58e-09!2;CL:0000955!1.58e-09!2;CL:0000818!1.58e-09!2;CL:0000954!1.58e-09!2;CL:0000816!1.58e-09!2;CL:0002032!2.69e-09!165;CL:0000837!2.69e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.11e-95;13!CL:0000945;1.09e-60;24!CL:0000542;3.69e-28;53!CL:0000785;3.65e-12;1!CL:0000819;3.65e-12;1!CL:0002087;1.69e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.55e-88,14;CL:0000945,9.77e-61,24;CL:0000826,9.77e-61,24;CL:0000542,9.97e-37,53;CL:0000051,9.97e-37,53;CL:0000838,4.30e-32,52;CL:0002087,3.72e-18,115;CL:0000738,4.87e-15,136;CL:0002031,7.05e-15,120;CL:0002032,2.25e-12,161;CL:0000837,2.25e-12,161;CL:0000819,3.65e-12,1;CL:0000037,9.06e-12,168;CL:0000988,4.64e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000051;3.69e-28;53!UBERON:0004872;8.59e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!5.19e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:12603;2.78e-12;1!DOID:0060073;3.65e-12;1!DOID:8675;3.65e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.93e-12,1;DOID:0060073,3.65e-12,1;DOID:8675,3.65e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.10e-10!7;UBERON:0000341!2.52e-09!2;UBERON:0000974!3.30e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.02e-22;2!UBERON:0005058;1.02e-22;2!UBERON:0009113;1.02e-22;2!UBERON:0004177;9.86e-20;5!UBERON:0005057;9.86e-20;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.77e-14,7;UBERON:0005057,2.77e-14,7;UBERON:0002370,7.37e-12,4;UBERON:0005058,7.37e-12,4;UBERON:0009113,7.37e-12,4;UBERON:0003295,7.37e-12,4;UBERON:0005562,7.37e-12,4;UBERON:0003351,3.39e-08,6 | |||
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| ||
|short_description=p2@RHBDD1 | |||
}} | }} |
Latest revision as of 03:28, 25 September 2015
Short description: | p2@RHBDD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RHBDD1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000409053_5end |
EntrezGene: | RHBDD1 |
HGNC: | 23081 |
UniProt: | B9A054 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.55e-88 | 14 |
lymphocyte of B lineage | 9.77e-61 | 24 |
pro-B cell | 9.77e-61 | 24 |
lymphocyte | 9.97e-37 | 53 |
common lymphoid progenitor | 9.97e-37 | 53 |
lymphoid lineage restricted progenitor cell | 4.30e-32 | 52 |
nongranular leukocyte | 3.72e-18 | 115 |
leukocyte | 4.87e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 7.05e-15 | 120 |
hematopoietic oligopotent progenitor cell | 2.25e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-12 | 161 |
B-1 B cell | 3.65e-12 | 1 |
hematopoietic stem cell | 9.06e-12 | 168 |
hematopoietic cell | 4.64e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.77e-14 | 7 |
immune organ | 2.77e-14 | 7 |
thymus | 7.37e-12 | 4 |
hemolymphoid system gland | 7.37e-12 | 4 |
thymic region | 7.37e-12 | 4 |
pharyngeal gland | 7.37e-12 | 4 |
thymus primordium | 7.37e-12 | 4 |
pharyngeal epithelium | 3.39e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.93e-12 | 1 |
lymphatic system cancer | 3.65e-12 | 1 |
lymphosarcoma | 3.65e-12 | 1 |