FFCP PHASE1:Hg19::chr16:2097403..2097426,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:2097403..2097426,+ to FFCP PHASE1:Hg19::chr16:2097403..2097426,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7249 | |EntrezGene=7249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12363 | |HGNC=12363 | ||
|TSSclassifier=strong | |||
|UniProt=P49815 | |UniProt=P49815 | ||
|association_with_transcript=-39bp_to_ENST00000219476_5end | |||
|cluster_id=chr16:2097403..2097426,+ | |||
|description=CAGE_peak_3_at_TSC2_5end | |||
|id=chr16:2097403..2097426,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002561;2.65e-11;2!CL:0002559;7.45e-10;5!CL:0002564;8.14e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.76e-11,2;CL:0002559,5.79e-10,5;CL:0002564,4.23e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;6.20e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.91e-12!115;UBERON:0000466!4.19e-08!126;UBERON:0009497!2.35e-07!25;UBERON:0000015!2.35e-07!25;UBERON:0002423!2.35e-07!25;UBERON:0006235!2.35e-07!25;UBERON:0004161!2.35e-07!25;UBERON:0009854!2.51e-07!23;UBERON:0005177!3.30e-07!107;UBERON:0005057!9.47e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.65e-11;2!UBERON:0005933;2.65e-11;2!UBERON:0005942;2.65e-11;2!UBERON:0005932;2.65e-11;2!UBERON:0002073;7.45e-10;5!UBERON:0011135;7.45e-10;5!UBERON:0002216;7.45e-10;5!UBERON:0011134;7.45e-10;5!UBERON:0002209;7.45e-10;5!UBERON:0002213;7.45e-10;5!UBERON:0007844;7.45e-10;5!UBERON:0011138;7.45e-10;5!UBERON:0001130;7.45e-10;5!UBERON:0001066;7.45e-10;5!UBERON:0001468;7.45e-10;5!UBERON:0001044;2.75e-08;6!UBERON:0003293;2.75e-08;6!UBERON:0003294;2.75e-08;6!UBERON:0010047;2.75e-08;6!UBERON:0003408;2.75e-08;6!UBERON:0000167;2.75e-08;6!UBERON:0002242;8.14e-08;3!UBERON:0002365;2.44e-07;31!UBERON:0002330;2.44e-07;31!UBERON:0000998;6.20e-07;1!UBERON:0006868;6.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.50e-11,2;UBERON:0005933,1.76e-11,2;UBERON:0005942,1.76e-11,2;UBERON:0005932,1.76e-11,2;UBERON:0011135,2.84e-10,5;UBERON:0002216,2.84e-10,5;UBERON:0011134,2.84e-10,5;UBERON:0002209,2.84e-10,5;UBERON:0002213,2.84e-10,5;UBERON:0005856,2.84e-10,5;UBERON:0005866,2.84e-10,5;UBERON:0005863,2.84e-10,5;UBERON:0007844,2.84e-10,5;UBERON:0011138,2.84e-10,5;UBERON:0001130,2.84e-10,5;UBERON:0001066,2.84e-10,5;UBERON:0001468,2.84e-10,5;UBERON:0002073,5.79e-10,5;UBERON:0005086,5.79e-10,5;UBERON:0001044,1.45e-08,6;UBERON:0003293,1.45e-08,6;UBERON:0003294,1.45e-08,6;UBERON:0010047,1.45e-08,6;UBERON:0000167,1.45e-08,6;UBERON:0002242,4.23e-08,3;UBERON:0003068,4.23e-08,3;UBERON:0002328,4.23e-08,3;UBERON:0004880,4.23e-08,3;UBERON:0002365,2.65e-07,31;UBERON:0002330,2.65e-07,31;UBERON:0000998,5.90e-07,1;UBERON:0006868,5.90e-07,1;UBERON:0000989,7.35e-07,1;UBERON:0008811,7.35e-07,1;UBERON:0006258,7.35e-07,1;UBERON:0005876,7.35e-07,1;UBERON:0004874,7.35e-07,1;UBERON:0006834,7.77e-07,1;UBERON:0001831,9.67e-07,1;UBERON:0001567,9.67e-07,1;UBERON:0008801,9.67e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,2.00146596706261,0,0,0,0,0,0,0,0,0,0.618831764800233,1.65698687863958,0,0,0,0,0.369363174230364,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,2.00535164254356,0.869079113764942,0,0,0,0,0.087834785693126,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0,0,0.35576626268671,0,0.805658634218294,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0.204154171254893,0,0.413303124703062,1.18800285728205,0.247266929278557,0,0,0,0,0,0.877955241761676,0,0.150238058906597,0,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.309157587715317,0,0.37223371266318,0,0.0974370051611986,0,0.736399189138395,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,1.38134921352481,1.39310378409594,1.44375896333917,0,0,0,0,0.435758888184812,0,0.269662616320329,0,0,0.738155454624648,0,0.8231480226628,1.47008711385542,1.26755034821831,0.982827216677626,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,1.02882949704857,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,1.50051156317903,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.173767228936166,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,1.44257416306811,0.366277859273374,0.577566499444116,0,0,0,0,0,0,0,0.322260734604821,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0,0.511795582622668,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0.540911356951966,0,0,0.18714054040822,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0.359473404589307,0.179021174675609,0,0.493217028184668,0,0,0,0,0,0,1.13697999995054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07730361905316,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0.166211681900156,0,0,0,0.189753732724185,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0.150323419414493,0,0.664653872707185,0,0,0,0,0,0,0,0,0.873633341210151,0.343972064943233,0,0.146178634172371,0.0821154570532092,0.387956065953678,0,0.225980740780532,0,0,0.0633107959558787,0,0.160317640503067,1.49417096317547,0,0,0,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,0,0.599037001496973,0.858452096273142,1.11585728720936,1.2764859772478,0,0,0.157566364614447,0.329663433524666,0.202210631562555,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0.315222829196793,1.10154635083496,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,1.17241786942466,0,0.129282956361551,0,0.342173675768659,0,0.747511887973863,2.04365596629566,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0.310482014706917,0,0.124980407962107,0,0,1.17632909849086,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.526472298444801,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,1.64477330057155,1.98484471355718,0,0,0,0,0,0,0.266107110487916,0,0.342976018874837,0.0679697329768317,0.0657727735628491,0,0.444925607568277,1.17739639275771,0,0,0.913158720509496,0,0,0.857718530119876,0,0,0,0,0,0,0,1.72090943528111,0,0,2.11693525095465,0,0,0,0,0,0.365753774946808,0.647428837187895,0.205325613712494,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0,0.469919589899268,2.77168918286382,0,0,0,0.0802413666891683,0,1.37618785021362,0,0,0.0679914901909147,0,0,0.371995018166751,0.924351257262837,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0.985123076837112,1.33982065078089,0,0,1.0661699095049,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0,0.808468755832877,0,0.342233301085281,0.336760265072938,0.358611026963382,0.332660356546013,0,0.106727345877715,0,1.43720323370539,0,1.833621662743,0.813792356631477,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,2.00146596706261,0,0,0,0,0,0,0,0,0,0.618831764800233,1.65698687863958,0,0,0,0,0.369363174230364,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,2.00535164254356,0.869079113764942,0,0,0,0,0.087834785693126,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0,0,0.35576626268671,0,0.805658634218294,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0.204154171254893,0,0.413303124703062,1.18800285728205,0.247266929278557,0,0,0,0,0,0.877955241761676,0,0.150238058906597,0,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.309157587715317,0,0.37223371266318,0,0.0974370051611986,0,0.736399189138395,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,1.38134921352481,1.39310378409594,1.44375896333917,0,0,0,0,0.435758888184812,0,0.269662616320329,0,0,0.738155454624648,0,0.8231480226628,1.47008711385542,1.26755034821831,0.982827216677626,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,1.02882949704857,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,1.50051156317903,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.173767228936166,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,1.44257416306811,0.366277859273374,0.577566499444116,0,0,0,0,0,0,0,0.322260734604821,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0,0.511795582622668,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0.540911356951966,0,0,0.18714054040822,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0.359473404589307,0.179021174675609,0,0.493217028184668,0,0,0,0,0,0,1.13697999995054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07730361905316,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0.166211681900156,0,0,0,0.189753732724185,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0.150323419414493,0,0.664653872707185,0,0,0,0,0,0,0,0,0.873633341210151,0.343972064943233,0,0.146178634172371,0.0821154570532092,0.387956065953678,0,0.225980740780532,0,0,0.0633107959558787,0,0.160317640503067,1.49417096317547,0,0,0,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,0,0.599037001496973,0.858452096273142,1.11585728720936,1.2764859772478,0,0,0.157566364614447,0.329663433524666,0.202210631562555,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0.315222829196793,1.10154635083496,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,1.17241786942466,0,0.129282956361551,0,0.342173675768659,0,0.747511887973863,2.04365596629566,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0.310482014706917,0,0.124980407962107,0,0,1.17632909849086,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.526472298444801,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,1.64477330057155,1.98484471355718,0,0,0,0,0,0,0.266107110487916,0,0.342976018874837,0.0679697329768317,0.0657727735628491,0,0.444925607568277,1.17739639275771,0,0,0.913158720509496,0,0,0.857718530119876,0,0,0,0,0,0,0,1.72090943528111,0,0,2.11693525095465,0,0,0,0,0,0.365753774946808,0.647428837187895,0.205325613712494,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0,0.469919589899268,2.77168918286382,0,0,0,0.0802413666891683,0,1.37618785021362,0,0,0.0679914901909147,0,0,0.371995018166751,0.924351257262837,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0.985123076837112,1.33982065078089,0,0,1.0661699095049,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0,0.808468755832877,0,0.342233301085281,0.336760265072938,0.358611026963382,0.332660356546013,0,0.106727345877715,0,1.43720323370539,0,1.833621662743,0.813792356631477,0,0.201273793591026,0 | ||
|short_description=p3@TSC2 | |||
}} | }} |
Latest revision as of 03:19, 25 September 2015
Short description: | p3@TSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000219476_5end |
EntrezGene: | TSC2 |
HGNC: | 12363 |
UniProt: | P49815 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.76e-11 | 2 |
hair follicle cell | 5.79e-10 | 5 |
nucleus pulposus cell of intervertebral disc | 4.23e-08 | 3 |