FFCP PHASE1:Hg19::chr19:10928246..10928266,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=406976 | |EntrezGene=406976 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=31571 | |HGNC=31571 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-74bp_to_NR_029586,uc010xlj.1_5end | |association_with_transcript=-74bp_to_NR_029586,uc010xlj.1_5end | ||
|cluster_id=chr19:10928246..10928266,- | |||
|description=CAGE_peak_4_at_MIR199A1_5end | |description=CAGE_peak_4_at_MIR199A1_5end | ||
|id=chr19:10928246..10928266,- | |id=chr19:10928246..10928266,- | ||
|ontology_enrichment_celltype=CL:0000055!8.61e-37!180;CL:0000057!2.27e-31!75;CL:0002620!3.05e-26!23;CL:0000048!3.37e-20!430;CL:0000723!1.35e-19!436;CL:0000034!8.07e-19!444;CL:0000680!1.28e-17!57;CL:0000056!1.28e-17!57;CL:0000355!1.28e-17!57;CL:0000187!1.73e-17!54;CL:0000183!2.25e-15!59;CL:0000393!5.37e-15!60;CL:0000211!5.37e-15!60;CL:0000192!3.11e-14!42;CL:0000514!3.11e-14!42;CL:0002371!9.59e-12!591;CL:0000359!4.28e-11!32;CL:0000144!8.89e-10!625;CL:0002556!1.22e-08!6;CL:0002320!2.35e-08!365;CL:0000134!2.47e-08!358;CL:0000548!3.73e-08!679;CL:0000004!3.73e-08!679;CL:0000255!3.73e-08!679;CL:0000012!5.22e-08!682;CL:0002595!3.57e-07!5 | |ontology_enrichment_celltype=CL:0000055!8.61e-37!180;CL:0000057!2.27e-31!75;CL:0002620!3.05e-26!23;CL:0000048!3.37e-20!430;CL:0000723!1.35e-19!436;CL:0000034!8.07e-19!444;CL:0000680!1.28e-17!57;CL:0000056!1.28e-17!57;CL:0000355!1.28e-17!57;CL:0000187!1.73e-17!54;CL:0000183!2.25e-15!59;CL:0000393!5.37e-15!60;CL:0000211!5.37e-15!60;CL:0000192!3.11e-14!42;CL:0000514!3.11e-14!42;CL:0002371!9.59e-12!591;CL:0000359!4.28e-11!32;CL:0000144!8.89e-10!625;CL:0002556!1.22e-08!6;CL:0002320!2.35e-08!365;CL:0000134!2.47e-08!358;CL:0000548!3.73e-08!679;CL:0000004!3.73e-08!679;CL:0000255!3.73e-08!679;CL:0000012!5.22e-08!682;CL:0002595!3.57e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.66e-12;23!CL:0002595;7.11e-10;5!CL:0000359;1.31e-07;32!CL:0002596;8.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.93e-12,23;CL:0002595,6.80e-10,5;CL:0000359,1.26e-08,32;CL:0000057,2.12e-08,76;CL:0002596,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.60e-12;1!UBERON:0003852;2.60e-12;1 | |||
|ontology_enrichment_disease=DOID:17!1.32e-10!5;DOID:450!1.32e-10!5;DOID:66!1.32e-10!5;DOID:423!1.32e-10!5;DOID:0080000!1.32e-10!5;DOID:11722!1.32e-10!5 | |ontology_enrichment_disease=DOID:17!1.32e-10!5;DOID:450!1.32e-10!5;DOID:66!1.32e-10!5;DOID:423!1.32e-10!5;DOID:0080000!1.32e-10!5;DOID:11722!1.32e-10!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.30e-24!83;UBERON:0002329!9.30e-24!83;UBERON:0003077!9.30e-24!83;UBERON:0003059!9.30e-24!83;UBERON:0007282!9.30e-24!83;UBERON:0009618!9.30e-24!83;UBERON:0007285!9.30e-24!83;UBERON:0004290!1.21e-19!70;UBERON:0003102!1.83e-19!95;UBERON:0002199!3.69e-19!45;UBERON:0002416!3.69e-19!45;UBERON:0002097!2.94e-18!40;UBERON:0001134!5.89e-16!61;UBERON:0002036!5.89e-16!61;UBERON:0003082!5.89e-16!61;UBERON:0000486!1.97e-15!82;UBERON:0002385!3.31e-15!63;UBERON:0001015!3.31e-15!63;UBERON:0000383!3.31e-15!63;UBERON:0000475!1.05e-11!365;UBERON:0005256!1.22e-11!143;UBERON:0002100!1.05e-09!216;UBERON:0001758!1.22e-08!6;UBERON:0003672!1.22e-08!6;UBERON:0002384!3.68e-08!375;UBERON:0001637!9.81e-08!42;UBERON:0003509!9.81e-08!42;UBERON:0004572!9.81e-08!42;UBERON:0003834!3.57e-07!5;UBERON:0001533!3.57e-07!5;UBERON:0004573!9.77e-07!33;UBERON:0004571!9.77e-07!33 | |ontology_enrichment_uberon=UBERON:0000914!9.30e-24!83;UBERON:0002329!9.30e-24!83;UBERON:0003077!9.30e-24!83;UBERON:0003059!9.30e-24!83;UBERON:0007282!9.30e-24!83;UBERON:0009618!9.30e-24!83;UBERON:0007285!9.30e-24!83;UBERON:0004290!1.21e-19!70;UBERON:0003102!1.83e-19!95;UBERON:0002199!3.69e-19!45;UBERON:0002416!3.69e-19!45;UBERON:0002097!2.94e-18!40;UBERON:0001134!5.89e-16!61;UBERON:0002036!5.89e-16!61;UBERON:0003082!5.89e-16!61;UBERON:0000486!1.97e-15!82;UBERON:0002385!3.31e-15!63;UBERON:0001015!3.31e-15!63;UBERON:0000383!3.31e-15!63;UBERON:0000475!1.05e-11!365;UBERON:0005256!1.22e-11!143;UBERON:0002100!1.05e-09!216;UBERON:0001758!1.22e-08!6;UBERON:0003672!1.22e-08!6;UBERON:0002384!3.68e-08!375;UBERON:0001637!9.81e-08!42;UBERON:0003509!9.81e-08!42;UBERON:0004572!9.81e-08!42;UBERON:0003834!3.57e-07!5;UBERON:0001533!3.57e-07!5;UBERON:0004573!9.77e-07!33;UBERON:0004571!9.77e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0005705;2.60e-12;1!UBERON:0008193;2.60e-12;1!UBERON:0010912;2.60e-12;1!UBERON:0002514;2.60e-12;1!UBERON:0003457;2.60e-12;1!UBERON:0008907;2.60e-12;1!UBERON:0008001;2.60e-12;1!UBERON:0007213;2.60e-12;1!UBERON:0009891;2.60e-12;1!UBERON:0007914;2.60e-12;1!UBERON:0007375;2.60e-12;1!UBERON:0003323;2.60e-12;1!UBERON:0010258;2.60e-12;1!UBERON:0005253;2.60e-12;1!UBERON:0007842;2.60e-12;1!UBERON:0002397;2.60e-12;1!UBERON:0003113;2.60e-12;1!UBERON:0003277;2.60e-12;1!UBERON:0001709;2.60e-12;1!UBERON:0002244;2.60e-12;1!UBERON:0005620;2.60e-12;1!UBERON:0010364;2.60e-12;1!UBERON:0004288;2.60e-12;1!UBERON:0004573;1.94e-11;33!UBERON:0004571;1.94e-11;33!UBERON:0003834;7.11e-10;5!UBERON:0001533;7.11e-10;5!UBERON:0002199;2.02e-08;46!UBERON:0002416;2.02e-08;46!UBERON:0003513;2.69e-07;7!UBERON:0005396;8.76e-07;2!UBERON:0004089;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,3.85e-12,1;UBERON:0008193,3.85e-12,1;UBERON:0010912,3.85e-12,1;UBERON:0002514,3.85e-12,1;UBERON:0003457,3.85e-12,1;UBERON:0008907,3.85e-12,1;UBERON:0008001,3.85e-12,1;UBERON:0007213,3.85e-12,1;UBERON:0009891,3.85e-12,1;UBERON:0007914,3.85e-12,1;UBERON:0009292,3.85e-12,1;UBERON:0003099,3.85e-12,1;UBERON:0007375,3.85e-12,1;UBERON:0003323,3.85e-12,1;UBERON:0010258,3.85e-12,1;UBERON:0007842,3.85e-12,1;UBERON:0009494,3.85e-12,1;UBERON:0010042,3.85e-12,1;UBERON:0010045,3.85e-12,1;UBERON:0010259,3.85e-12,1;UBERON:0010359,3.85e-12,1;UBERON:0009526,3.85e-12,1;UBERON:0002397,3.85e-12,1;UBERON:0003113,3.85e-12,1;UBERON:0003277,3.85e-12,1;UBERON:0001709,3.85e-12,1;UBERON:0004066,3.85e-12,1;UBERON:0002244,3.85e-12,1;UBERON:0005620,3.85e-12,1;UBERON:0004362,3.85e-12,1;UBERON:0010364,3.85e-12,1;UBERON:0010046,3.85e-12,1;UBERON:0005868,3.85e-12,1;UBERON:0007238,3.85e-12,1;UBERON:0004288,3.85e-12,1;UBERON:0004068,3.85e-12,1;UBERON:0010334,3.85e-12,1;UBERON:0003852,3.85e-12,1;UBERON:0010253,3.85e-12,1;UBERON:0004573,7.56e-12,33;UBERON:0004571,7.56e-12,33;UBERON:0002199,3.76e-11,46;UBERON:0002416,3.76e-11,46;UBERON:0003834,6.80e-10,5;UBERON:0001533,6.80e-10,5;UBERON:0002097,2.59e-09,41;UBERON:0001637,3.17e-09,42;UBERON:0003509,3.17e-09,42;UBERON:0004572,3.17e-09,42;UBERON:0003513,2.60e-07,7;UBERON:0005396,7.20e-07,2;UBERON:0007524,8.08e-07,73 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0,2.53299878168311,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03154887090231,0,0,0,2.1349799145941,0,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0.61417158655884,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0,0.277064115484183,0.877955241761676,0.612975591598039,0.751190294532984,0,0.179389635688862,1.06778694409284,0.847727604638247,0.900273288253207,0.515262646192195,1.03056216018252,0.18611685633159,1.18143432568886,0.0974370051611986,1.26216887122057,0.368199594569197,0.161646056818812,1.77504796258307,0.201504196455281,0,0,0,0,0,0,0,0,0,0,4.69348596989448,0,0,0.928735856063958,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0.35142424497814,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,1.07423381301644,0,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.62962469366128,1.3940745403212,0,0,1.73986598415015,0.18532421910392,0,0,0,0.190630193923825,0,0,1.59101623962968,0.78494864019923,0.359744915166629,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,2.2054613741845,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0.563391205064483,0,0,0,0.709522128141196,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.754703705257725,0,0.228840068396924,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0,2.53299878168311,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03154887090231,0,0,0,2.1349799145941,0,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0.61417158655884,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0,0.277064115484183,0.877955241761676,0.612975591598039,0.751190294532984,0,0.179389635688862,1.06778694409284,0.847727604638247,0.900273288253207,0.515262646192195,1.03056216018252,0.18611685633159,1.18143432568886,0.0974370051611986,1.26216887122057,0.368199594569197,0.161646056818812,1.77504796258307,0.201504196455281,0,0,0,0,0,0,0,0,0,0,4.69348596989448,0,0,0.928735856063958,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0.35142424497814,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,1.07423381301644,0,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.62962469366128,1.3940745403212,0,0,1.73986598415015,0.18532421910392,0,0,0,0.190630193923825,0,0,1.59101623962968,0.78494864019923,0.359744915166629,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,2.2054613741845,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0.563391205064483,0,0,0,0.709522128141196,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.754703705257725,0,0.228840068396924,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@MIR199A1 | |short_description=p4@MIR199A1 | ||
}} | }} |
Latest revision as of 03:09, 25 September 2015
Short description: | p4@MIR199A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MIR199A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -74bp_to_NR_029586, uc010xlj.1_5end |
EntrezGene: | MIR199A1 |
HGNC: | 31571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.93e-12 | 23 |
smooth muscle cell of the subclavian artery | 6.80e-10 | 5 |
vascular associated smooth muscle cell | 1.26e-08 | 32 |
fibroblast | 2.12e-08 | 76 |
smooth muscle cell of the carotid artery | 7.20e-07 | 2 |