FFCP PHASE1:Hg19::chr20:3065362..3065375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=551 | |EntrezGene=551 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=894 | |HGNC=894 | ||
|TSSclassifier=strong | |||
|UniProt=P01185 | |UniProt=P01185 | ||
|association_with_transcript=0bp_to_ENST00000380293,NM_000490,uc002whu.2_5end | |association_with_transcript=0bp_to_ENST00000380293,NM_000490,uc002whu.2_5end | ||
|cluster_id=chr20:3065362..3065375,- | |||
|coexpression_cluster_id=C375 | |coexpression_cluster_id=C375 | ||
|description=CAGE_peak_1_at_AVP_5end | |description=CAGE_peak_1_at_AVP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000784!5.38e-14!3 | |ontology_enrichment_celltype=CL:0000784!5.38e-14!3 | ||
|ontology_enrichment_celltype_v019=CL:0000037;7.89e-13;1!CL:0001024;7.89e-13;1 | |ontology_enrichment_celltype_v019=CL:0000037;7.89e-13;1!CL:0001024;7.89e-13;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0001024,7.89e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.03e-13;1 | |ontology_enrichment_development_v019=UBERON:0005425;7.03e-13;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000349;2.46e-35;5!UBERON:0001876;5.17e-23;2!UBERON:0000007;1.86e-22;2!UBERON:0000941;7.03e-13;1!UBERON:0001785;7.03e-13;1!UBERON:0002464;7.03e-13;1!UBERON:0004904;7.03e-13;1!UBERON:0001021;7.03e-13;1!UBERON:0001882;1.48e-12;1!UBERON:0005403;1.48e-12;1!UBERON:0003296;9.90e-12;4!UBERON:0010133;9.90e-12;4!UBERON:0002420;1.09e-11;9!UBERON:0007245;1.09e-11;9!UBERON:0010009;1.09e-11;9!UBERON:0010011;1.09e-11;9!UBERON:0000454;1.09e-11;9!UBERON:0002780;5.15e-11;41!UBERON:0001890;5.15e-11;41!UBERON:0002791;3.62e-08;32!UBERON:0001869;3.62e-08;32!UBERON:0002619;8.00e-08;22!UBERON:0000073;9.55e-08;53!UBERON:0002616;9.55e-08;53!UBERON:0000955;1.39e-07;68!UBERON:0003528;1.44e-07;34!UBERON:0002020;1.44e-07;34!UBERON:0001871;3.10e-07;6!UBERON:0001894;4.43e-07;7!UBERON:0003714;4.56e-07;2!UBERON:0005162;4.56e-07;2!UBERON:0000122;4.56e-07;2!UBERON:0000956;6.12e-07;25!UBERON:0000203;6.12e-07;25!UBERON:0002360;8.52e-07;2!UBERON:0000094;8.52e-07;2!UBERON:0010743;8.52e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000349;2.46e-35;5!UBERON:0001876;5.17e-23;2!UBERON:0000007;1.86e-22;2!UBERON:0000941;7.03e-13;1!UBERON:0001785;7.03e-13;1!UBERON:0002464;7.03e-13;1!UBERON:0004904;7.03e-13;1!UBERON:0001021;7.03e-13;1!UBERON:0001882;1.48e-12;1!UBERON:0005403;1.48e-12;1!UBERON:0003296;9.90e-12;4!UBERON:0010133;9.90e-12;4!UBERON:0002420;1.09e-11;9!UBERON:0007245;1.09e-11;9!UBERON:0010009;1.09e-11;9!UBERON:0010011;1.09e-11;9!UBERON:0000454;1.09e-11;9!UBERON:0002780;5.15e-11;41!UBERON:0001890;5.15e-11;41!UBERON:0002791;3.62e-08;32!UBERON:0001869;3.62e-08;32!UBERON:0002619;8.00e-08;22!UBERON:0000073;9.55e-08;53!UBERON:0002616;9.55e-08;53!UBERON:0000955;1.39e-07;68!UBERON:0003528;1.44e-07;34!UBERON:0002020;1.44e-07;34!UBERON:0001871;3.10e-07;6!UBERON:0001894;4.43e-07;7!UBERON:0003714;4.56e-07;2!UBERON:0005162;4.56e-07;2!UBERON:0000122;4.56e-07;2!UBERON:0000956;6.12e-07;25!UBERON:0000203;6.12e-07;25!UBERON:0002360;8.52e-07;2!UBERON:0000094;8.52e-07;2!UBERON:0010743;8.52e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000349,2.15e-35,5;UBERON:0001876,4.89e-23,2;UBERON:0000007,2.08e-22,2;UBERON:0001016,6.39e-13,89;UBERON:0000941,7.03e-13,1;UBERON:0001785,7.03e-13,1;UBERON:0002464,7.03e-13,1;UBERON:0004904,7.03e-13,1;UBERON:0001021,7.03e-13,1;UBERON:0003902,7.03e-13,1;UBERON:0005425,7.03e-13,1;UBERON:0001882,1.57e-12,1;UBERON:0005403,1.57e-12,1;UBERON:0002780,4.41e-12,41;UBERON:0001890,4.41e-12,41;UBERON:0003080,4.41e-12,41;UBERON:0006240,4.41e-12,41;UBERON:0001017,7.65e-12,81;UBERON:0003296,1.05e-11,4;UBERON:0010133,1.05e-11,4;UBERON:0002420,1.09e-11,9;UBERON:0007245,1.09e-11,9;UBERON:0010009,1.09e-11,9;UBERON:0010011,1.09e-11,9;UBERON:0000454,1.09e-11,9;UBERON:0000955,1.57e-11,68;UBERON:0006238,1.57e-11,68;UBERON:0003056,1.94e-10,61;UBERON:0000073,2.95e-09,53;UBERON:0002616,2.95e-09,53;UBERON:0001049,9.78e-09,56;UBERON:0005068,9.78e-09,56;UBERON:0006241,9.78e-09,56;UBERON:0007135,9.78e-09,56;UBERON:0002791,3.10e-08,32;UBERON:0001869,3.10e-08,32;UBERON:0002619,7.78e-08,22;UBERON:0003528,9.31e-08,34;UBERON:0002020,9.31e-08,34;UBERON:0001893,9.31e-08,34;UBERON:0003075,1.44e-07,82;UBERON:0007284,1.44e-07,82;UBERON:0001871,3.05e-07,6;UBERON:0002346,3.53e-07,86;UBERON:0003714,4.56e-07,2;UBERON:0005162,4.56e-07,2;UBERON:0000122,4.56e-07,2;UBERON:0001894,4.57e-07,7;UBERON:0006222,4.57e-07,7;UBERON:0000956,5.97e-07,25;UBERON:0000203,5.97e-07,25;UBERON:0002360,8.52e-07,2;UBERON:0000094,8.52e-07,2;UBERON:0010743,8.52e-07,2 | |||
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|short_description=p1@AVP | |short_description=p1@AVP | ||
}} | }} |
Latest revision as of 02:20, 25 September 2015
Short description: | p1@AVP |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AVP_5end |
Coexpression cluster: | C375_optic_Cardiac_occipital_hippocampus_amygdala_heart_vagina |
Association with transcript: | 0bp_to_ENST00000380293, NM_000490, uc002whu.2_5end |
EntrezGene: | AVP |
HGNC: | 894 |
UniProt: | P01185 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 7.89e-13 | 1 |