FFCP PHASE1:Hg19::chr1:215178693..215178706,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6277 | |||
|TSSclassifier=strong | |||
|UniProt=O95069,Q6ZW95 | |||
|association_with_transcript=-178bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | |||
|cluster_id=chr1:215178693..215178706,+ | |||
|coexpression_cluster_id=C633 | |||
|description=CAGE_peak_28_at_KCNK2_5end | |||
|id=chr1:215178693..215178706,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.29e-19!75;CL:0002334!1.69e-15!12;CL:0002556!1.36e-12!6;CL:0000055!2.08e-11!180;CL:0002580!2.58e-10!3;CL:0000197!5.10e-09!6;CL:0000098!5.10e-09!6;CL:0002167!5.10e-09!6;CL:0002620!2.92e-07!23;CL:0002583!3.48e-07!2;CL:0002617!4.06e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000197;7.23e-24;6!CL:0000098;7.23e-24;6!CL:0002167;7.23e-24;6!CL:0002591;1.41e-16;1!CL:0002570;1.42e-08;8!CL:0000710;1.38e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,4.91e-24,6;CL:0000098,4.91e-24,6;CL:0002167,4.91e-24,6;CL:0002591,2.25e-16,1;CL:0002570,1.71e-08,8;CL:0000710,1.24e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;2.95e-21;3!DOID:2513;1.41e-16;1!DOID:3369;1.41e-16;1!DOID:3451;5.93e-09;2!DOID:4159;5.93e-09;2!DOID:0060122;5.93e-09;2!DOID:3193;5.93e-09;2!DOID:962;5.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,2.96e-21,3;DOID:3369,1.21e-16,1;DOID:2513,1.93e-16,1;DOID:3193,6.42e-09,2;DOID:962,6.42e-09,2;DOID:3451,6.94e-09,2;DOID:4159,6.94e-09,2;DOID:0060122,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001758!1.36e-12!6;UBERON:0003672!1.36e-12!6;UBERON:0003102!5.93e-10!95;UBERON:0003129!2.08e-09!11;UBERON:0002199!9.78e-09!45;UBERON:0002416!9.78e-09!45;UBERON:0000075!7.50e-08!13;UBERON:0005944!7.50e-08!13;UBERON:0004288!7.50e-08!13;UBERON:0003089!7.50e-08!13;UBERON:0000310!1.12e-07!10;UBERON:0002097!3.84e-07!40;UBERON:0001443!6.10e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;5.93e-09;2!UBERON:0002012;5.93e-09;2!UBERON:0008886;5.93e-09;2!UBERON:0002097;4.56e-08;41!UBERON:0002199;3.54e-07;46!UBERON:0002416;3.54e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.44e-09,41;UBERON:0000078,7.49e-09,2;UBERON:0007497,7.49e-09,2;UBERON:0003643,7.49e-09,2;UBERON:0003504,7.49e-09,2;UBERON:0003469,7.49e-09,2;UBERON:0003496,7.49e-09,2;UBERON:0002012,7.49e-09,2;UBERON:0008886,7.49e-09,2;UBERON:0007303,7.49e-09,2;UBERON:0002061,7.49e-09,2;UBERON:0005432,7.49e-09,2;UBERON:0004363,7.49e-09,2;UBERON:0002199,2.55e-08,46;UBERON:0002416,2.55e-08,46 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0.886413581652058,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0.277064115484183,0.877955241761676,0.612975591598039,0.300476117813194,0,0,0.640672166455702,1.69545520927649,0,0,0,0.18611685633159,1.0126579934476,0.0974370051611986,0.252433774244115,1.74894807420369,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,8.20773348466944,2.20783381047509,1.87426263988341,0,0,0,0.664225598535437,0.184369168541703,0.695068915744663,0,0,0,0,0,0,0,0,0.992431231275107,0.61384789315225,0.841980283299221,0.768834895534206,0,0.321707842287215,0,0.616838775210622,0.532685175939381,0.492762936082855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37358282073117,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0.857440047187092,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p28@KCNK2 | |||
}} |
Latest revision as of 02:18, 25 September 2015
Short description: | p28@KCNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_KCNK2_5end |
Coexpression cluster: | C633_Olfactory_Fibroblast_Preadipocyte_Hair_tenocyte_mesenchymal_basal |
Association with transcript: | -178bp_to_NM_001017424, uc001hko.2, uc001hkp.2, uc009xdm.2_5end |
EntrezGene: | KCNK2 |
HGNC: | 6277 |
UniProt: | O95069Q6ZW95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 4.91e-24 | 6 |
sensory epithelial cell | 4.91e-24 | 6 |
olfactory epithelial cell | 4.91e-24 | 6 |
smooth muscle cell of the pulmonary artery | 2.25e-16 | 1 |
mesenchymal stem cell of adipose | 1.71e-08 | 8 |
neurecto-epithelial cell | 1.24e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.44e-09 | 41 |
mixed ectoderm/mesoderm/endoderm-derived structure | 7.49e-09 | 2 |
developing epithelial placode | 7.49e-09 | 2 |
respiratory system arterial blood vessel | 7.49e-09 | 2 |
respiratory system blood vessel | 7.49e-09 | 2 |
respiratory system artery | 7.49e-09 | 2 |
head blood vessel | 7.49e-09 | 2 |
pulmonary artery | 7.49e-09 | 2 |
pulmonary vascular system | 7.49e-09 | 2 |
pharyngeal vasculature | 7.49e-09 | 2 |
truncus arteriosus | 7.49e-09 | 2 |
aortic sac | 7.49e-09 | 2 |
pharyngeal arch artery | 7.49e-09 | 2 |
integument | 2.55e-08 | 46 |
integumental system | 2.55e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 2.96e-21 | 3 |
peripheral primitive neuroectodermal tumor | 1.21e-16 | 1 |
basal cell carcinoma | 1.93e-16 | 1 |
peripheral nerve sheath neoplasm | 6.42e-09 | 2 |
neurofibroma | 6.42e-09 | 2 |
skin carcinoma | 6.94e-09 | 2 |
skin cancer | 6.94e-09 | 2 |
integumentary system cancer | 6.94e-09 | 2 |