FFCP PHASE1:Hg19::chr6:137243349..137243360,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340146 | |EntrezGene=340146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15621 | |HGNC=15621 | ||
|TSSclassifier=strong | |||
|UniProt=Q5M8T2 | |UniProt=Q5M8T2 | ||
|association_with_transcript=-41bp_to_ENST00000331858,NM_001008783,uc003qhe.2_5end | |association_with_transcript=-41bp_to_ENST00000331858,NM_001008783,uc003qhe.2_5end | ||
|cluster_id=chr6:137243349..137243360,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_3_at_SLC35D3_5end | |description=CAGE_peak_3_at_SLC35D3_5end | ||
|id=chr6:137243349..137243360,+ | |id=chr6:137243349..137243360,+ | ||
|ontology_enrichment_celltype=CL:0002322!9.44e-12!5;CL:0000242!2.09e-09!2 | |ontology_enrichment_celltype=CL:0002322!9.44e-12!5;CL:0000242!2.09e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.42e-50;2!CL:0000242;2.42e-50;2!CL:0000167;2.16e-26;1!CL:0000164;2.16e-26;1!CL:0000502;2.16e-26;1!CL:0000172;2.16e-26;1!CL:0000173;2.16e-26;1!CL:0000312;7.35e-21;5!CL:0000240;1.44e-17;6!CL:0000311;1.44e-17;6!CL:0000079;1.44e-17;6!CL:0000237;1.44e-17;6!CL:0002535;1.37e-13;2!CL:0000362;4.67e-12;9!CL:0002159;4.34e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.42e-50,2;CL:0000167,2.16e-26,1;CL:0000164,2.16e-26,1;CL:0000502,2.16e-26,1;CL:0000172,2.16e-26,1;CL:0000173,2.16e-26,1;CL:0002351,2.16e-26,1;CL:0000312,7.35e-21,5;CL:0000240,1.44e-17,6;CL:0000311,1.44e-17,6;CL:0000079,1.44e-17,6;CL:0000237,1.44e-17,6;CL:0000036,1.44e-17,6;CL:0000357,1.44e-17,6;CL:0000114,1.44e-17,6;CL:0002535,1.55e-13,2;CL:0000362,4.67e-12,9;CL:0002159,4.34e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002351;2.16e-26;1!CL:0000357;1.44e-17;6!CL:0000114;1.44e-17;6!UBERON:0010122;1.37e-13;2!UBERON:0003056;1.67e-09;3 | |||
|ontology_enrichment_disease=DOID:3119!7.65e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:4430;2.16e-26;1!DOID:4362;1.04e-20;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.16e-26,1;DOID:4362,1.10e-20,5 | |||
|ontology_enrichment_uberon=UBERON:0000369!1.91e-16!4;UBERON:0002435!1.91e-16!4;UBERON:0000204!1.91e-16!4;UBERON:0010082!1.91e-16!4;UBERON:0002308!2.97e-15!9;UBERON:0000125!2.97e-15!9;UBERON:0009663!3.15e-14!7;UBERON:0005383!6.63e-13!3;UBERON:0005382!6.63e-13!3;UBERON:0002420!5.48e-11!9;UBERON:0007245!5.48e-11!9;UBERON:0010009!5.48e-11!9;UBERON:0010011!5.48e-11!9;UBERON:0000454!5.48e-11!9;UBERON:0001873!3.24e-09!2;UBERON:0010122!3.24e-09!2;UBERON:0000966!9.97e-08!5;UBERON:0005388!9.97e-08!5;UBERON:0001802!9.97e-08!5 | |ontology_enrichment_uberon=UBERON:0000369!1.91e-16!4;UBERON:0002435!1.91e-16!4;UBERON:0000204!1.91e-16!4;UBERON:0010082!1.91e-16!4;UBERON:0002308!2.97e-15!9;UBERON:0000125!2.97e-15!9;UBERON:0009663!3.15e-14!7;UBERON:0005383!6.63e-13!3;UBERON:0005382!6.63e-13!3;UBERON:0002420!5.48e-11!9;UBERON:0007245!5.48e-11!9;UBERON:0010009!5.48e-11!9;UBERON:0010011!5.48e-11!9;UBERON:0000454!5.48e-11!9;UBERON:0001873!3.24e-09!2;UBERON:0010122!3.24e-09!2;UBERON:0000966!9.97e-08!5;UBERON:0005388!9.97e-08!5;UBERON:0001802!9.97e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;1.93e-17;6!UBERON:0001560;1.93e-17;6!UBERON:0001873;1.37e-13;2!UBERON:0006955;1.37e-13;2!UBERON:0004801;1.37e-13;2!UBERON:0005383;1.67e-09;3!UBERON:0005382;1.67e-09;3!UBERON:0001003;1.31e-07;15!UBERON:0007376;1.31e-07;15!UBERON:0000369;1.92e-07;4!UBERON:0002435;1.92e-07;4!UBERON:0000204;1.92e-07;4!UBERON:0000995;8.97e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,2.01e-17,6;UBERON:0001560,2.01e-17,6;UBERON:0001873,1.37e-13,2;UBERON:0010122,1.37e-13,2;UBERON:0006955,1.55e-13,2;UBERON:0004801,1.55e-13,2;UBERON:0005383,1.67e-09,3;UBERON:0005382,1.67e-09,3;UBERON:0001003,1.31e-07,15;UBERON:0007376,1.31e-07,15;UBERON:0007383,1.31e-07,15;UBERON:0000369,1.92e-07,4;UBERON:0002435,1.92e-07,4;UBERON:0000204,1.92e-07,4;UBERON:0010082,1.92e-07,4 | |||
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| ||
|short_description=p3@SLC35D3 | |short_description=p3@SLC35D3 | ||
}} | }} |
Latest revision as of 01:30, 25 September 2015
Short description: | p3@SLC35D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC35D3_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | -41bp_to_ENST00000331858, NM_001008783, uc003qhe.2_5end |
EntrezGene: | SLC35D3 |
HGNC: | 15621 |
UniProt: | Q5M8T2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.42e-50 | 2 |
peptide hormone secreting cell | 2.16e-26 | 1 |
enteroendocrine cell | 2.16e-26 | 1 |
type D enteroendocrine cell | 2.16e-26 | 1 |
somatostatin secreting cell | 2.16e-26 | 1 |
pancreatic D cell | 2.16e-26 | 1 |
progenitor cell of endocrine pancreas | 2.16e-26 | 1 |
keratinocyte | 7.35e-21 | 5 |
stratified squamous epithelial cell | 1.44e-17 | 6 |
keratin accumulating cell | 1.44e-17 | 6 |
stratified epithelial cell | 1.44e-17 | 6 |
keratinizing barrier epithelial cell | 1.44e-17 | 6 |
epithelial fate stem cell | 1.44e-17 | 6 |
stratified epithelial stem cell | 1.44e-17 | 6 |
surface ectodermal cell | 1.44e-17 | 6 |
epithelial cell of cervix | 1.55e-13 | 2 |
epidermal cell | 4.67e-12 | 9 |
general ecto-epithelial cell | 4.34e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 2.01e-17 | 6 |
neck of organ | 2.01e-17 | 6 |
caudate nucleus | 1.37e-13 | 2 |
future caudate nucleus | 1.37e-13 | 2 |
uterine epithelium | 1.55e-13 | 2 |
cervix epithelium | 1.55e-13 | 2 |
caudate-putamen | 1.67e-09 | 3 |
dorsal striatum | 1.67e-09 | 3 |
skin epidermis | 1.31e-07 | 15 |
outer epithelium | 1.31e-07 | 15 |
enveloping layer of ectoderm | 1.31e-07 | 15 |
corpus striatum | 1.92e-07 | 4 |
striatum | 1.92e-07 | 4 |
ventral part of telencephalon | 1.92e-07 | 4 |
future corpus striatum | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.16e-26 | 1 |
cervical cancer | 1.10e-20 | 5 |