FFCP PHASE1:Hg19::chr2:224903995..224904010,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5270 | |EntrezGene=5270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8951 | |HGNC=8951 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000409304,ENST00000489065_5end | |association_with_transcript=0bp_to_ENST00000409304,ENST00000489065_5end | ||
|cluster_id=chr2:224903995..224904010,- | |||
|coexpression_cluster_id=C354 | |coexpression_cluster_id=C354 | ||
|description=CAGE_peak_1_at_SERPINE2_5end | |description=CAGE_peak_1_at_SERPINE2_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.46e-32!180;CL:0000057!6.48e-19!75;CL:0002620!2.10e-09!23;CL:0000680!7.77e-09!57;CL:0000056!7.77e-09!57;CL:0000355!7.77e-09!57;CL:0000359!1.03e-08!32;CL:0000192!4.94e-08!42;CL:0000514!4.94e-08!42;CL:0000220!5.67e-08!246;CL:0002321!7.96e-08!248;CL:0000187!1.28e-07!54;CL:0000393!1.66e-07!60;CL:0000211!1.66e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.46e-32!180;CL:0000057!6.48e-19!75;CL:0002620!2.10e-09!23;CL:0000680!7.77e-09!57;CL:0000056!7.77e-09!57;CL:0000355!7.77e-09!57;CL:0000359!1.03e-08!32;CL:0000192!4.94e-08!42;CL:0000514!4.94e-08!42;CL:0000220!5.67e-08!246;CL:0002321!7.96e-08!248;CL:0000187!1.28e-07!54;CL:0000393!1.66e-07!60;CL:0000211!1.66e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.93e-09;23!CL:0000359;3.55e-08;32!CL:0000057;1.48e-07;73 | |ontology_enrichment_celltype_v019=CL:0002620;1.93e-09;23!CL:0000359;3.55e-08;32!CL:0000057;1.48e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.48e-19,76;CL:0002620,1.95e-09,23;CL:0000359,9.60e-09,32;CL:0000680,1.66e-08,58;CL:0000056,1.66e-08,58;CL:0000355,1.66e-08,58;CL:0000192,1.19e-07,43;CL:0000514,1.19e-07,43;CL:0002321,1.30e-07,250;CL:0000187,2.59e-07,55;CL:0000393,3.19e-07,61;CL:0000211,3.19e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.31e-18!365;UBERON:0000486!3.03e-12!82;UBERON:0000914!3.90e-12!83;UBERON:0002329!3.90e-12!83;UBERON:0003077!3.90e-12!83;UBERON:0003059!3.90e-12!83;UBERON:0007282!3.90e-12!83;UBERON:0009618!3.90e-12!83;UBERON:0007285!3.90e-12!83;UBERON:0000468!5.46e-12!659;UBERON:0000481!2.32e-11!347;UBERON:0000483!5.90e-11!309;UBERON:0000119!6.99e-11!312;UBERON:0003102!1.14e-10!95;UBERON:0002199!2.73e-10!45;UBERON:0002416!2.73e-10!45;UBERON:0002097!3.49e-10!40;UBERON:0004290!5.88e-10!70;UBERON:0002100!6.91e-09!216;UBERON:0000467!9.86e-09!625;UBERON:0000480!1.08e-08!626;UBERON:0001637!2.14e-08!42;UBERON:0003509!2.14e-08!42;UBERON:0004572!2.14e-08!42;UBERON:0004111!2.40e-08!241;UBERON:0001134!3.74e-08!61;UBERON:0002036!3.74e-08!61;UBERON:0003082!3.74e-08!61;UBERON:0000477!4.46e-08!286;UBERON:0002385!5.65e-08!63;UBERON:0001015!5.65e-08!63;UBERON:0000383!5.65e-08!63;UBERON:0004872!8.50e-08!84;UBERON:0005256!1.33e-07!143;UBERON:0004573!2.38e-07!33;UBERON:0004571!2.38e-07!33;UBERON:0000025!2.75e-07!194;UBERON:0004121!4.88e-07!169;UBERON:0000924!7.06e-07!173;UBERON:0006601!7.06e-07!173;UBERON:0000064!9.22e-07!219 | |ontology_enrichment_uberon=UBERON:0000475!1.31e-18!365;UBERON:0000486!3.03e-12!82;UBERON:0000914!3.90e-12!83;UBERON:0002329!3.90e-12!83;UBERON:0003077!3.90e-12!83;UBERON:0003059!3.90e-12!83;UBERON:0007282!3.90e-12!83;UBERON:0009618!3.90e-12!83;UBERON:0007285!3.90e-12!83;UBERON:0000468!5.46e-12!659;UBERON:0000481!2.32e-11!347;UBERON:0000483!5.90e-11!309;UBERON:0000119!6.99e-11!312;UBERON:0003102!1.14e-10!95;UBERON:0002199!2.73e-10!45;UBERON:0002416!2.73e-10!45;UBERON:0002097!3.49e-10!40;UBERON:0004290!5.88e-10!70;UBERON:0002100!6.91e-09!216;UBERON:0000467!9.86e-09!625;UBERON:0000480!1.08e-08!626;UBERON:0001637!2.14e-08!42;UBERON:0003509!2.14e-08!42;UBERON:0004572!2.14e-08!42;UBERON:0004111!2.40e-08!241;UBERON:0001134!3.74e-08!61;UBERON:0002036!3.74e-08!61;UBERON:0003082!3.74e-08!61;UBERON:0000477!4.46e-08!286;UBERON:0002385!5.65e-08!63;UBERON:0001015!5.65e-08!63;UBERON:0000383!5.65e-08!63;UBERON:0004872!8.50e-08!84;UBERON:0005256!1.33e-07!143;UBERON:0004573!2.38e-07!33;UBERON:0004571!2.38e-07!33;UBERON:0000025!2.75e-07!194;UBERON:0004121!4.88e-07!169;UBERON:0000924!7.06e-07!173;UBERON:0006601!7.06e-07!173;UBERON:0000064!9.22e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.46e-08;41!UBERON:0002199;2.80e-07;46!UBERON:0002416;2.80e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0002097;2.46e-08;41!UBERON:0002199;2.80e-07;46!UBERON:0002416;2.80e-07;46 | ||
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| ||
|short_description=p1@SERPINE2 | |short_description=p1@SERPINE2 | ||
}} | }} |
Latest revision as of 01:18, 25 September 2015
Short description: | p1@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 0bp_to_ENST00000409304, ENST00000489065_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.48e-19 | 76 |
skin fibroblast | 1.95e-09 | 23 |
vascular associated smooth muscle cell | 9.60e-09 | 32 |
muscle precursor cell | 1.66e-08 | 58 |
myoblast | 1.66e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.66e-08 | 58 |
smooth muscle cell | 1.19e-07 | 43 |
smooth muscle myoblast | 1.19e-07 | 43 |
embryonic cell | 1.30e-07 | 250 |
muscle cell | 2.59e-07 | 55 |
electrically responsive cell | 3.19e-07 | 61 |
electrically active cell | 3.19e-07 | 61 |