FFCP PHASE1:Hg19::chr12:80794469..80794483,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:80794469..80794483,+ | |||
|coexpression_cluster_id=C3337 | |||
|description=CAGE_peak_at_chr12:80794469..80794483,+ | |description=CAGE_peak_at_chr12:80794469..80794483,+ | ||
|id=chr12:80794469..80794483,+ | |id=chr12:80794469..80794483,+ | ||
|ontology_enrichment_celltype=CL:0000064!1.98e-09!3;CL:0005012!1.98e-09!3;CL:0000067!1.98e-09!3;CL:0002304!1.98e-09!3 | |ontology_enrichment_celltype=CL:0000064!1.98e-09!3;CL:0005012!1.98e-09!3;CL:0000067!1.98e-09!3;CL:0002304!1.98e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.79e-07;3!CL:0000067;2.79e-07;3!CL:0005012;2.79e-07;3!CL:0002304;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.79e-07,3;CL:0000067,2.79e-07,3;CL:0005012,2.79e-07,3;CL:0002304,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.08e-19;1!UBERON:0006242;3.25e-19;1!UBERON:0010122;2.72e-10;2!UBERON:0003918;2.67e-08;10!UBERON:0007687;2.67e-08;10!UBERON:0003056;2.79e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005383;5.17e-25;3!UBERON:0005382;5.17e-25;3!UBERON:0001874;1.42e-19;1!UBERON:0000369;4.92e-19;4!UBERON:0002435;4.92e-19;4!UBERON:0000204;4.92e-19;4!UBERON:0009663;2.62e-11;7!UBERON:0000007;2.72e-10;2!UBERON:0001873;2.72e-10;2!UBERON:0002420;5.31e-09;9!UBERON:0000125;5.31e-09;9!UBERON:0007245;5.31e-09;9!UBERON:0002308;5.31e-09;9!UBERON:0010009;5.31e-09;9!UBERON:0010011;5.31e-09;9!UBERON:0000454;5.31e-09;9!UBERON:0001896;2.79e-07;3!UBERON:0002110;2.79e-07;3!UBERON:0001778;2.79e-07;3!UBERON:0001775;2.79e-07;3!UBERON:0005290;2.79e-07;3 | |||
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| ||
|short_description=p@chr12:80794469..80794483,+ | |short_description=p@chr12:80794469..80794483,+ | ||
}} | }} |
Latest revision as of 01:12, 25 September 2015
Short description: | p@chr12:80794469..80794483, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:80794469..80794483, + |
Coexpression cluster: | C3337_kidney_umbilical_retina_putamen_Ciliary_brain_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.79e-07 | 3 |
ciliated epithelial cell | 2.79e-07 | 3 |
multi-ciliated epithelial cell | 2.79e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 3.82e-25 | 3 |
dorsal striatum | 3.82e-25 | 3 |
putamen | 1.30e-19 | 1 |
corpus striatum | 3.92e-19 | 4 |
striatum | 3.92e-19 | 4 |
ventral part of telencephalon | 3.92e-19 | 4 |
future corpus striatum | 3.92e-19 | 4 |
telencephalic nucleus | 2.30e-11 | 7 |
caudate nucleus | 2.27e-10 | 2 |
future caudate nucleus | 2.27e-10 | 2 |
pituitary gland | 2.99e-10 | 2 |
adult organism | 1.26e-09 | 114 |
basal ganglion | 4.80e-09 | 9 |
neural nucleus | 4.80e-09 | 9 |
nuclear complex of neuraxis | 4.80e-09 | 9 |
nucleus of brain | 4.80e-09 | 9 |
aggregate regional part of brain | 4.80e-09 | 9 |
collection of basal ganglia | 4.80e-09 | 9 |
cerebral subcortex | 4.80e-09 | 9 |
neural plate | 1.26e-07 | 82 |
presumptive neural plate | 1.26e-07 | 82 |
pre-chordal neural plate | 2.60e-07 | 61 |
gallbladder | 2.63e-07 | 3 |
gall bladder primordium | 2.63e-07 | 3 |
ciliary epithelium | 2.79e-07 | 3 |
ciliary body | 2.79e-07 | 3 |
neurectoderm | 2.90e-07 | 86 |
medulla oblongata | 3.16e-07 | 3 |
myelencephalon | 3.16e-07 | 3 |
future myelencephalon | 3.16e-07 | 3 |