FFCP PHASE1:Hg19::chr2:224849601..224849622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5270 | |EntrezGene=5270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8951 | |HGNC=8951 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=162bp_to_ENST00000478966_5end | |association_with_transcript=162bp_to_ENST00000478966_5end | ||
|cluster_id=chr2:224849601..224849622,- | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_5_at_SERPINE2_5end | |description=CAGE_peak_5_at_SERPINE2_5end | ||
|id=chr2:224849601..224849622,- | |id=chr2:224849601..224849622,- | ||
|ontology_enrichment_celltype=CL:0000055!4.39e-20!180;CL:0000057!8.95e-14!75;CL:0002620!4.16e-10!23;CL:0002334!3.36e-07!12 | |ontology_enrichment_celltype=CL:0000055!4.39e-20!180;CL:0000057!8.95e-14!75;CL:0002620!4.16e-10!23;CL:0002334!3.36e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.52e-13;23!CL:0000499;1.13e-09;28!CL:0000153;1.50e-09;9!CL:0000447;1.50e-09;9!CL:0002334;4.45e-09;12!CL:1000306;3.05e-08;4!CL:0002547;3.05e-08;4!CL:0000138;1.16e-07;6!CL:0000135;6.56e-07;3!CL:0000388;6.56e-07;3!CL:0000057;6.74e-07;73!CL:0002541;7.07e-07;3!CL:0002579;7.35e-07;3!CL:0000327;9.07e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.99e-20,76;CL:0002620,6.19e-13,23;CL:0000723,6.32e-11,433;CL:0000048,6.90e-11,427;CL:0000034,2.54e-10,441;CL:0000499,9.53e-10,28;CL:0002320,1.33e-09,361;CL:0000153,1.78e-09,9;CL:0000447,1.78e-09,9;CL:0000134,3.88e-09,354;CL:0002334,5.22e-09,12;CL:1000306,3.75e-08,4;CL:0002547,3.75e-08,4;CL:0000219,4.40e-08,386;CL:0000058,1.51e-07,6;CL:0000138,1.51e-07,6;CL:0002541,6.48e-07,3;CL:0000135,6.73e-07,3;CL:0000388,6.73e-07,3;CL:0002579,7.26e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;8.08e-09;5!DOID:450;8.08e-09;5!DOID:66;8.08e-09;5!DOID:423;8.08e-09;5!DOID:0080000;8.08e-09;5!DOID:11722;8.08e-09;5!DOID:0060084;6.14e-07;3!DOID:127;6.14e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.82e-09,5;DOID:450,6.82e-09,5;DOID:66,6.82e-09,5;DOID:423,6.82e-09,5;DOID:0080000,6.82e-09,5;DOID:11722,6.82e-09,5;DOID:0060084,6.01e-07,3;DOID:127,6.01e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002097!4.01e-09!40;UBERON:0002199!9.70e-09!45;UBERON:0002416!9.70e-09!45;UBERON:0003102!1.15e-08!95;UBERON:0000914!5.15e-07!83;UBERON:0002329!5.15e-07!83;UBERON:0003077!5.15e-07!83;UBERON:0003059!5.15e-07!83;UBERON:0007282!5.15e-07!83;UBERON:0009618!5.15e-07!83;UBERON:0007285!5.15e-07!83 | |ontology_enrichment_uberon=UBERON:0002097!4.01e-09!40;UBERON:0002199!9.70e-09!45;UBERON:0002416!9.70e-09!45;UBERON:0003102!1.15e-08!95;UBERON:0000914!5.15e-07!83;UBERON:0002329!5.15e-07!83;UBERON:0003077!5.15e-07!83;UBERON:0003059!5.15e-07!83;UBERON:0007282!5.15e-07!83;UBERON:0009618!5.15e-07!83;UBERON:0007285!5.15e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.98e-12;9!UBERON:0000042;1.98e-12;9!UBERON:0003688;7.63e-11;6!UBERON:0002358;7.63e-11;6!UBERON:0003684;7.63e-11;6!UBERON:0001178;7.63e-11;6!UBERON:0002097;1.10e-09;41!UBERON:0004797;3.05e-08;4!UBERON:0000415;3.05e-08;4!UBERON:0007240;3.05e-08;4!UBERON:0005742;3.05e-08;4!UBERON:0005734;3.05e-08;4!UBERON:0004664;3.05e-08;4!UBERON:0004663;3.05e-08;4!UBERON:0002384;1.11e-07;198!UBERON:0002199;5.38e-07;46!UBERON:0002416;5.38e-07;46!UBERON:0007846;6.56e-07;3!UBERON:0000043;6.56e-07;3!UBERON:0007845;6.56e-07;3!UBERON:0003124;7.07e-07;3!UBERON:0000920;7.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.79e-12,41;UBERON:0003688,5.78e-11,6;UBERON:0002358,5.78e-11,6;UBERON:0003684,5.78e-11,6;UBERON:0001178,5.78e-11,6;UBERON:0002199,1.66e-10,46;UBERON:0002416,1.66e-10,46;UBERON:0002384,2.16e-09,371;UBERON:0004923,2.82e-09,66;UBERON:0004457,5.52e-09,12;UBERON:0000042,5.52e-09,12;UBERON:0000415,3.75e-08,4;UBERON:0007240,3.75e-08,4;UBERON:0005742,3.75e-08,4;UBERON:0005734,3.75e-08,4;UBERON:0004664,3.75e-08,4;UBERON:0004663,3.75e-08,4;UBERON:0000920,6.48e-07,3;UBERON:0007846,6.73e-07,3;UBERON:0000043,6.73e-07,3;UBERON:0007845,6.73e-07,3 | |||
|phase1_expression=1.99846217197612,2.5692062866918,1.83240725324762,8.00586386825043,1.34088328328186,22.6808016266096,0,0,0.261185628199839,0.245733936501509,0,0,0,0.618831764800233,2.98257638155124,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,3.2529523714611,1.00267582127178,4.34539556882471,3.9764297352555,19.4653948121054,0,0,0.087834785693126,0.130979075497713,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,7.9515512271251,5.06522046658319,3.04541115870403,26.9626423503885,3.19201543978521,2.80338800071154,2.1349799145941,0.98667019366864,0,0,0.326923806226917,0,0,0,0.312160076830321,0,1.49448680551801,1.17434498643765,0.647491777472526,0.140450806702248,0.61246251376468,0.245668634623536,0.103325781175765,0,2.71993622206413,0,0.718618141816238,0.168336113954066,0,0,0,1.5324389789951,1.35214253015937,0,3.04962380671065,1.92201649936711,2.33125091275518,6.30191301777245,2.57631323096097,4.12224864073007,3.16398655763703,0.843881661206331,1.55899208257918,1.00973509697646,1.47279837827679,1.45481451136931,8.52023022039874,3.12331504505685,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0.243947412259191,0.265059536642971,0,0.207322110030741,0.504641701751257,0,1.56449532329816,6.43240938192885,0,0,3.60939740834793,0,0.168584690078102,0,0,0.435758888184812,0.71181185733329,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.878002283269004,0,1.20634766893957,0,0,0,0,0,0,0.721832238805369,0,0,0,0,0,0,0,0,0.16798212819886,0,0.626909658919938,0,0,0,0,0,0,0,0.126995788584338,0,1.17217447210047,1.71072446022705,2.87916979569306,0,0,0,0,0,1.29271715757778,0,1.690605505112,2.6593811658487,0,0,0,1.0656887160644,0.142977993658148,2.17048642156577,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,6.37037749337349,8.01357657946495,0.358121926479791,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0.36807447515742,1.50051156317903,0.542530047399471,0.415941723061614,2.3195768543631,0.946214490203608,0.937131319941706,0,11.3703752027992,1.03473071292505,0,0.368738337083406,4.25729710893606,0,0,0,0,0,0,3.32870879020994,0.604780586659361,5.70647957983187,1.07423381301644,5.3325417942284,10.2511319404561,4.60536524160033,18.1764930892276,23.7468906311986,0.154209693802656,0.532685175939381,0.0821271560138091,2.59627214591811,0.116210378459959,0,7.41873940122154,0.828728900423067,0.229628896329213,1.82091168006717,0.917870904715969,0,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0.574265537996172,0,8.03419649220798,0.096670718292122,0.308097234229289,0.307007349452259,0.413509717453592,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0.576570202095319,0,0.2023155617111,1.85938219718914,12.277681526395,0,1.23213432070436,0.532306030317022,0.869932992075073,0.18532421910392,0.572499546967965,0,0,0,0,0.42793898803392,0,1.56989728039846,0.179872457583315,0.823611089208164,1.64937363283961,0.202182481573316,0,0,0,9.50482609562009,1.05650146756755,0.136499911407986,1.55545975149084,1.13008116620243,0.551365343546124,4.64407282668854,3.5076070820301,0,0,0.608731130888112,1.54911749049875,0.563391205064483,0.143411352204052,0.294747123039363,0.7133421029625,0,21.9551940709571,3.95153871551882,0,0,0,0,1.08890984861323,0.470719003883896,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,1.90995587790152,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0,0.398495976502139,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0.723578631752448,0,0.331737779793674,0.295547618953547,0.219385397153973,0.21787692703798,0,0.0769502585037971,0.227884111694002,0,0,0,14.6740533476683,3.84709892287822,40.5106429774162,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0.627865836814451,0,0,0.277349346026277,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0.271808412147228,0.104602846312333,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,3.24269895188163,0,0,0.164831716762333,0,0,0,0,0.408610218334727,0.803765742325096,0.275078873194468,0.83088067605837,0,0,0.12149911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| ||
|short_description=p5@SERPINE2 | |short_description=p5@SERPINE2 | ||
}} | }} |
Latest revision as of 00:55, 25 September 2015
Short description: | p5@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 162bp_to_ENST00000478966_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.99e-20 | 76 |
skin fibroblast | 6.19e-13 | 23 |
somatic stem cell | 6.32e-11 | 433 |
multi fate stem cell | 6.90e-11 | 427 |
stem cell | 2.54e-10 | 441 |
stromal cell | 9.53e-10 | 28 |
connective tissue cell | 1.33e-09 | 361 |
GAG secreting cell | 1.78e-09 | 9 |
carbohydrate secreting cell | 1.78e-09 | 9 |
mesenchymal cell | 3.88e-09 | 354 |
preadipocyte | 5.22e-09 | 12 |
fibroblast of tunica adventitia of artery | 3.75e-08 | 4 |
fibroblast of the aortic adventitia | 3.75e-08 | 4 |
motile cell | 4.40e-08 | 386 |
chondroblast | 1.51e-07 | 6 |
chondrocyte | 1.51e-07 | 6 |
chorionic membrane mesenchymal stem cell | 6.48e-07 | 3 |
fibrocyte | 6.73e-07 | 3 |
tendon cell | 6.73e-07 | 3 |
omentum preadipocyte | 7.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.79e-12 | 41 |
omentum | 5.78e-11 | 6 |
peritoneum | 5.78e-11 | 6 |
abdominal cavity | 5.78e-11 | 6 |
visceral peritoneum | 5.78e-11 | 6 |
integument | 1.66e-10 | 46 |
integumental system | 1.66e-10 | 46 |
connective tissue | 2.16e-09 | 371 |
organ component layer | 2.82e-09 | 66 |
cavity lining | 5.52e-09 | 12 |
serous membrane | 5.52e-09 | 12 |
artery wall | 3.75e-08 | 4 |
tunica adventitia of artery | 3.75e-08 | 4 |
adventitia | 3.75e-08 | 4 |
tunica adventitia of blood vessel | 3.75e-08 | 4 |
aorta tunica adventitia | 3.75e-08 | 4 |
aorta wall | 3.75e-08 | 4 |
egg chorion | 6.48e-07 | 3 |
dense regular connective tissue | 6.73e-07 | 3 |
tendon | 6.73e-07 | 3 |
regular connective tissue | 6.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.82e-09 | 5 |
myotonic disease | 6.82e-09 | 5 |
muscle tissue disease | 6.82e-09 | 5 |
myopathy | 6.82e-09 | 5 |
muscular disease | 6.82e-09 | 5 |
myotonic dystrophy | 6.82e-09 | 5 |
cell type benign neoplasm | 6.01e-07 | 3 |
leiomyoma | 6.01e-07 | 3 |