FFCP PHASE1:Hg19::chr11:89224580..89224594,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50507 | |EntrezGene=50507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7891 | |HGNC=7891 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000525278_5end | |association_with_transcript=-18bp_to_ENST00000525278_5end | ||
|cluster_id=chr11:89224580..89224594,- | |||
|coexpression_cluster_id=C1648 | |coexpression_cluster_id=C1648 | ||
|description=CAGE_peak_4_at_NOX4_5end | |description=CAGE_peak_4_at_NOX4_5end | ||
|id=chr11:89224580..89224594,- | |id=chr11:89224580..89224594,- | ||
|ontology_enrichment_celltype=CL:0002139!4.50e-23!24;CL:0000115!8.07e-18!35;CL:0000071!2.50e-17!18;CL:0002546!2.50e-17!18;CL:0000222!1.19e-13!119;CL:0002078!2.82e-13!44;CL:1000413!1.56e-10!9;CL:0002321!1.57e-09!248;CL:0000220!2.30e-09!246;CL:0000213!4.23e-09!57;CL:0000215!4.23e-09!57;CL:0000359!1.02e-08!32;CL:0000393!4.13e-08!60;CL:0000211!4.13e-08!60;CL:0000183!6.32e-08!59;CL:0002544!1.53e-07!6;CL:0000055!1.59e-07!180;CL:0005020!2.64e-07!6;CL:0002138!2.64e-07!6;CL:0005022!2.64e-07!6;CL:0000187!6.18e-07!54 | |ontology_enrichment_celltype=CL:0002139!4.50e-23!24;CL:0000115!8.07e-18!35;CL:0000071!2.50e-17!18;CL:0002546!2.50e-17!18;CL:0000222!1.19e-13!119;CL:0002078!2.82e-13!44;CL:1000413!1.56e-10!9;CL:0002321!1.57e-09!248;CL:0000220!2.30e-09!246;CL:0000213!4.23e-09!57;CL:0000215!4.23e-09!57;CL:0000359!1.02e-08!32;CL:0000393!4.13e-08!60;CL:0000211!4.13e-08!60;CL:0000183!6.32e-08!59;CL:0002544!1.53e-07!6;CL:0000055!1.59e-07!180;CL:0005020!2.64e-07!6;CL:0002138!2.64e-07!6;CL:0005022!2.64e-07!6;CL:0000187!6.18e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.14e-29;24!CL:0000071;1.23e-24;18!CL:0000115;3.67e-18;36!CL:0000064;5.60e-14;3!CL:0000067;5.60e-14;3!CL:0005012;5.60e-14;3!CL:0002304;5.60e-14;3!CL:0002605;1.06e-12;3!CL:0002078;1.69e-11;45!CL:1000413;6.61e-11;9!CL:0002543;7.56e-11;6!CL:0000213;2.34e-09;58!CL:0000215;2.34e-09;58!CL:0002594;2.41e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.41e-29,24;CL:0000071,8.54e-25,18;CL:0002546,8.54e-25,18;CL:0000115,1.76e-21,36;CL:0002078,1.76e-16,45;CL:0000064,5.66e-14,3;CL:0000067,5.66e-14,3;CL:0005012,5.66e-14,3;CL:0002304,5.66e-14,3;CL:0002605,3.98e-13,3;CL:0000213,5.11e-12,58;CL:0000215,5.11e-12,58;CL:1000413,5.22e-11,9;CL:0002543,5.58e-11,6;CL:0002594,2.19e-09,4;CL:0000222,1.92e-08,121;CL:0002544,8.03e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.23e-24;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.52e-30!79;UBERON:0007798!4.52e-30!79;UBERON:0000055!2.79e-26!69;UBERON:0004535!2.05e-23!110;UBERON:0001009!4.11e-23!113;UBERON:0001981!4.49e-23!60;UBERON:0007500!4.49e-23!60;UBERON:0004537!4.49e-23!60;UBERON:0006965!4.49e-23!60;UBERON:0004872!2.41e-22!84;UBERON:0003914!5.43e-18!118;UBERON:0001986!2.50e-17!18;UBERON:0004638!2.50e-17!18;UBERON:0004852!2.50e-17!18;UBERON:0001637!7.67e-16!42;UBERON:0003509!7.67e-16!42;UBERON:0004572!7.67e-16!42;UBERON:0000487!4.85e-13!22;UBERON:0000119!1.63e-11!312;UBERON:0000025!4.70e-11!194;UBERON:0006914!9.18e-11!25;UBERON:0003915!1.56e-10!9;UBERON:0004700!1.56e-10!9;UBERON:0001917!1.56e-10!9;UBERON:0000483!1.70e-10!309;UBERON:0004573!4.71e-10!33;UBERON:0004571!4.71e-10!33;UBERON:0004111!1.54e-09!241;UBERON:0000477!4.82e-09!286;UBERON:0007625!8.85e-09!11;UBERON:0000490!8.68e-08!138;UBERON:0000468!1.47e-07!659;UBERON:0001638!4.18e-07!9;UBERON:0003920!4.18e-07!9;UBERON:0004582!4.18e-07!9;UBERON:0000947!7.55e-07!21;UBERON:0010191!7.55e-07!21 | |ontology_enrichment_uberon=UBERON:0002049!4.52e-30!79;UBERON:0007798!4.52e-30!79;UBERON:0000055!2.79e-26!69;UBERON:0004535!2.05e-23!110;UBERON:0001009!4.11e-23!113;UBERON:0001981!4.49e-23!60;UBERON:0007500!4.49e-23!60;UBERON:0004537!4.49e-23!60;UBERON:0006965!4.49e-23!60;UBERON:0004872!2.41e-22!84;UBERON:0003914!5.43e-18!118;UBERON:0001986!2.50e-17!18;UBERON:0004638!2.50e-17!18;UBERON:0004852!2.50e-17!18;UBERON:0001637!7.67e-16!42;UBERON:0003509!7.67e-16!42;UBERON:0004572!7.67e-16!42;UBERON:0000487!4.85e-13!22;UBERON:0000119!1.63e-11!312;UBERON:0000025!4.70e-11!194;UBERON:0006914!9.18e-11!25;UBERON:0003915!1.56e-10!9;UBERON:0004700!1.56e-10!9;UBERON:0001917!1.56e-10!9;UBERON:0000483!1.70e-10!309;UBERON:0004573!4.71e-10!33;UBERON:0004571!4.71e-10!33;UBERON:0004111!1.54e-09!241;UBERON:0000477!4.82e-09!286;UBERON:0007625!8.85e-09!11;UBERON:0000490!8.68e-08!138;UBERON:0000468!1.47e-07!659;UBERON:0001638!4.18e-07!9;UBERON:0003920!4.18e-07!9;UBERON:0004582!4.18e-07!9;UBERON:0000947!7.55e-07!21;UBERON:0010191!7.55e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.23e-24;18!UBERON:0001986;1.23e-24;18!UBERON:0004852;1.23e-24;18!UBERON:0000487;9.82e-20;22!UBERON:0007625;8.82e-18;11!UBERON:0006914;4.33e-17;25!UBERON:0000490;1.02e-15;33!UBERON:0001778;5.60e-14;3!UBERON:0001775;5.60e-14;3!UBERON:0002104;1.67e-11;21!UBERON:0003915;6.61e-11;9!UBERON:0004700;6.61e-11;9!UBERON:0001917;6.61e-11;9!UBERON:0002049;9.37e-11;75!UBERON:0007798;9.37e-11;75!UBERON:0010260;1.22e-10;9!UBERON:0000488;1.38e-10;4!UBERON:0000055;2.65e-10;65!UBERON:0001032;6.79e-10;24!UBERON:0004456;6.79e-10;24!UBERON:0000019;7.41e-10;19!UBERON:0000047;7.41e-10;19!UBERON:0004088;7.41e-10;19!UBERON:0010230;7.41e-10;19!UBERON:0003914;9.37e-10;74!UBERON:0001310;2.41e-09;4!UBERON:0000970;2.60e-09;20!UBERON:0001456;8.07e-09;21!UBERON:0007500;1.73e-08;56!UBERON:0001981;1.73e-08;56!UBERON:0004537;1.73e-08;56!UBERON:0001637;5.18e-08;42!UBERON:0003509;5.18e-08;42!UBERON:0004572;5.18e-08;42!UBERON:0000020;5.79e-08;23!UBERON:0001801;1.89e-07;14!UBERON:0001638;3.02e-07;9!UBERON:0003920;3.02e-07;9!UBERON:0004582;3.02e-07;9!UBERON:0002203;3.58e-07;6!UBERON:0001768;3.58e-07;6!UBERON:0002200;3.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.54e-25,18;UBERON:0001986,8.54e-25,18;UBERON:0004852,8.54e-25,18;UBERON:0002049,1.06e-21,78;UBERON:0007798,1.06e-21,78;UBERON:0000487,7.29e-20,22;UBERON:0000055,1.54e-18,68;UBERON:0007625,6.28e-18,11;UBERON:0006914,3.34e-17,25;UBERON:0007500,1.46e-15,59;UBERON:0001981,1.46e-15,59;UBERON:0004537,1.46e-15,59;UBERON:0006965,1.46e-15,59;UBERON:0001778,5.66e-14,3;UBERON:0001775,5.66e-14,3;UBERON:0004535,6.20e-14,109;UBERON:0001009,2.05e-13,112;UBERON:0000019,2.93e-12,20;UBERON:0000047,2.93e-12,20;UBERON:0010312,2.93e-12,20;UBERON:0004088,2.93e-12,20;UBERON:0010230,2.93e-12,20;UBERON:0003072,2.93e-12,20;UBERON:0004128,2.93e-12,20;UBERON:0003071,2.93e-12,20;UBERON:0000970,1.31e-11,21;UBERON:0002104,1.31e-11,21;UBERON:0001456,5.10e-11,22;UBERON:0003915,5.22e-11,9;UBERON:0004700,5.22e-11,9;UBERON:0001917,5.22e-11,9;UBERON:0010260,1.12e-10,9;UBERON:0000488,1.40e-10,4;UBERON:0000020,5.50e-10,24;UBERON:0001032,5.50e-10,24;UBERON:0004456,5.50e-10,24;UBERON:0003914,6.21e-10,117;UBERON:0004872,6.29e-10,83;UBERON:0001781,7.32e-10,4;UBERON:0001310,2.19e-09,4;UBERON:0001637,2.59e-09,42;UBERON:0003509,2.59e-09,42;UBERON:0004572,2.59e-09,42;UBERON:0001801,1.90e-07,14;UBERON:0005085,2.00e-07,31;UBERON:0001638,2.48e-07,9;UBERON:0003920,2.48e-07,9;UBERON:0004582,2.48e-07,9;UBERON:0000119,3.47e-07,309;UBERON:0002203,3.60e-07,6;UBERON:0001768,3.60e-07,6;UBERON:0002200,3.60e-07,6 | |||
|phase1_expression=1.81678379270557,0.214100523890983,0.986680828671798,0,2.23480547213644,0,0,0,0,0,0,0,0,0,0,0.672325146451775,2.41077811209591,0,0.975865597581014,0.123121058076788,0,0,1.71741592278634,1.77936752594749,2.63639543149086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,5.95569348133627,5.76496433402666,5.70926107005319,1.0478326039817,0,0,0,0,0,0,0,0,1.78886166630035,1.72046919021225,0.694281003215189,0.56530794192401,0.838998872419812,1.10047216776027,1.25396979922086,1.55050055501597,0.71153252537342,1.67360306382335,1.20848795132744,2.28081631715554,0.732186172644509,0.735326160691737,3.24056779152704,1.87529429396568,0.44905874525234,1.0135033243499,0,2.84779697870439,1.64881569537367,0,0,0,0,0.12663051166458,0,0,0.709336764396714,0,0,0.74000264525148,0,0.404132016209064,0.163461903113459,0.302714855289863,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0.505008341862199,0,0,0,0,0,0.340296549480063,0.179389635688862,0.427114777637135,0.211931901159562,0,0.206105058476878,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0.339121184620975,0.193260853163297,0,0,0,0.265059536642971,0.348581828608555,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,1.44331342025273,0.579652024875384,3.17003474436719,1.01056513432752,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.763976851116555,0,0,0,0,0,0.112131084345361,0.43596006883328,1.39342743059805,2.32689088364,0,0,1.59562869950922,0,0,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.831883446123229,0,0.157702415033935,0.117141414992713,0,2.27407504055985,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.61384789315225,0,0,1.02341449813341,1.93024705372329,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.693138033939733,0,1.46139224653261,0.527758144464379,2.27466768141793,0.340187410553031,0.863663664408557,0,0.812839312631559,1.00337954770971,0.254876273045038,0,0,0,0,0,1.64007322849853,1.62689197332152,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,0.6970372701606,0,0,0,2.96518750566272,0.429374660225974,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0,0.117812402345686,0.606547444719948,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0,0,0,0.811641507850816,1.8589409885985,1.40847801266121,0.143411352204052,0.196498082026242,1.07001315444375,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0.276283915531148,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.822251547880505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0.795229689809303,0,0,0.275078873194468,0.415440338029185,0,0,0,0,1.57611414598396,1.04909176269996,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.856396000634902,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0.591420599958536,1.11507737014592,0,0.155262956876259,0,0.265841714557995,1.04349012362347,0,0,0,0.363697318405119,0.322231671127465,0.928067519756987,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.436838552768056,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,2.85538840518309,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0,0.0634158101939068,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,1.51399709802095,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0.476128862927481,0,0,0.33639558774184,0,0,0,0,0,0.0717222053926763,0,0.651226148887796,0,0,0,0,0.488965776731466,0.81379235663147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| ||
|short_description=p4@NOX4 | |short_description=p4@NOX4 | ||
}} | }} |
Latest revision as of 00:19, 25 September 2015
Short description: | p4@NOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NOX4_5end |
Coexpression cluster: | C1648_Adipocyte_Ciliary_Endothelial_Smooth_aorta_kidney_hepatic |
Association with transcript: | -18bp_to_ENST00000525278_5end |
EntrezGene: | NOX4 |
HGNC: | 7891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.41e-29 | 24 |
blood vessel endothelial cell | 8.54e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.54e-25 | 18 |
endothelial cell | 1.76e-21 | 36 |
meso-epithelial cell | 1.76e-16 | 45 |
ciliated cell | 5.66e-14 | 3 |
ciliated epithelial cell | 5.66e-14 | 3 |
multi-ciliated epithelial cell | 5.66e-14 | 3 |
non-pigmented ciliary epithelial cell | 5.66e-14 | 3 |
astrocyte of the cerebral cortex | 3.98e-13 | 3 |
lining cell | 5.11e-12 | 58 |
barrier cell | 5.11e-12 | 58 |
endothelial cell of artery | 5.22e-11 | 9 |
vein endothelial cell | 5.58e-11 | 6 |
smooth muscle cell of the umbilical artery | 2.19e-09 | 4 |
mesodermal cell | 1.92e-08 | 121 |
aortic endothelial cell | 8.03e-07 | 6 |