FFCP PHASE1:Hg19::chr3:136676853..136676864,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53833 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6004 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IYY5,F8WC67 | |||
|association_with_transcript=2bp_to_ENST00000309741,ENST00000469964_5end | |||
|cluster_id=chr3:136676853..136676864,+ | |||
|coexpression_cluster_id=C2720 | |||
|description=CAGE_peak_3_at_IL20RB_5end | |||
|id=chr3:136676853..136676864,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.89e-22!254;CL:0002076!2.45e-19!43;CL:0000223!2.79e-15!59;CL:0002251!2.45e-12!21;CL:0000063!1.63e-09!578;CL:0002159!6.27e-09!13;CL:0002368!2.14e-07!13;CL:0000548!5.44e-07!679;CL:0000004!5.44e-07!679;CL:0000255!5.44e-07!679;CL:0000622!9.92e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.83e-23;42!CL:0002251;2.34e-18;20!CL:0002368;7.22e-15;13!CL:0002159;5.38e-14;14!CL:0000622;3.45e-12;5!CL:0000154;4.73e-10;6!CL:0002202;3.39e-08;9!CL:0002632;3.39e-08;9!CL:0002623;3.65e-08;3!CL:0000307;1.47e-07;3!CL:0002166;4.67e-07;3!CL:0002621;5.80e-07;3!CL:0002328;7.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.83e-31,42;CL:0000066,4.28e-24,253;CL:0000223,1.05e-23,58;CL:0002251,1.45e-18,20;CL:0002368,5.27e-15,13;CL:0002159,4.48e-14,14;CL:0000622,3.68e-12,5;CL:0000154,4.98e-10,6;CL:0000076,1.91e-09,63;CL:0002321,1.82e-08,250;CL:0002202,2.99e-08,9;CL:0002632,2.99e-08,9;CL:0002623,3.67e-08,3;CL:0000068,1.83e-07,3;CL:0000069,1.83e-07,3;CL:0000307,1.83e-07,3;CL:0000377,1.83e-07,3;CL:0002166,3.18e-07,3;CL:0002328,5.04e-07,3;CL:0002621,5.14e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;6.93e-13;58!CL:0000377;1.47e-07;3 | |||
|ontology_enrichment_disease=DOID:305!3.31e-13!106;DOID:0050687!7.44e-12!143;DOID:1749!1.87e-08!14;DOID:14566!4.54e-08!239;DOID:162!4.85e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.92e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.50e-11,14;DOID:305,1.98e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003102!8.15e-19!95;UBERON:0004119!1.79e-14!169;UBERON:0000925!1.79e-14!169;UBERON:0006595!1.79e-14!169;UBERON:0001004!3.21e-12!72;UBERON:0002097!6.65e-11!40;UBERON:0001007!1.60e-10!155;UBERON:0001555!1.60e-10!155;UBERON:0007026!1.60e-10!155;UBERON:0000161!6.94e-10!35;UBERON:0000077!1.47e-09!130;UBERON:0002199!1.07e-08!45;UBERON:0002416!1.07e-08!45;UBERON:0000065!1.96e-08!53;UBERON:0004921!2.54e-08!129;UBERON:0004185!2.54e-08!129;UBERON:0001737!6.67e-08!9;UBERON:0001041!1.02e-07!98;UBERON:0000166!1.60e-07!21;UBERON:0000072!3.78e-07!46;UBERON:0001557!4.44e-07!19;UBERON:0000165!6.25e-07!28;UBERON:0000930!6.25e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;2.94e-09;19!UBERON:0000166;2.94e-09;19!UBERON:0001737;3.36e-09;9!UBERON:0001557;3.36e-09;9!UBERON:0000065;1.12e-08;44!UBERON:0001004;1.29e-08;65!UBERON:0000165;3.70e-08;28!UBERON:0001003;7.01e-08;15!UBERON:0007376;7.01e-08;15!UBERON:0001041;2.84e-07;14!UBERON:0002097;3.75e-07;41!UBERON:0001949;5.80e-07;3!UBERON:0010371;6.92e-07;31!UBERON:0004815;7.56e-07;3!UBERON:0002031;7.56e-07;3!UBERON:0003729;7.61e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.00e-17,99;UBERON:0001004,1.77e-16,74;UBERON:0000065,6.59e-12,54;UBERON:0004119,5.04e-11,160;UBERON:0000925,5.04e-11,160;UBERON:0006595,5.04e-11,160;UBERON:0001557,2.08e-09,19;UBERON:0001737,2.78e-09,9;UBERON:0000166,2.92e-09,22;UBERON:0000072,7.54e-09,47;UBERON:0000033,1.54e-08,56;UBERON:0001041,5.58e-08,87;UBERON:0001003,5.70e-08,15;UBERON:0007376,5.70e-08,15;UBERON:0007383,5.70e-08,15;UBERON:0000165,8.04e-08,29;UBERON:0000930,8.04e-08,29;UBERON:0002097,1.82e-07,41;UBERON:0000153,2.90e-07,62;UBERON:0007811,2.90e-07,62;UBERON:0001007,3.74e-07,145;UBERON:0001555,3.74e-07,145;UBERON:0007026,3.74e-07,145;UBERON:0004815,5.04e-07,3;UBERON:0002031,5.04e-07,3;UBERON:0001949,5.14e-07,3;UBERON:0008947,5.17e-07,38;UBERON:0003258,5.17e-07,38;UBERON:0003729,5.82e-07,13;UBERON:0000161,6.63e-07,36 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,1.8072355126695,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0,0,0,0,2.91436230634034,3.33705998505986,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0.496971951695318,0.506522046658319,0.529636723252875,2.58152958673932,0.709336764396714,0,0,0,0,0.269421344139376,0,0.151357427644931,0,2.34321431833797,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0.140450806702248,0.408308342509787,0,0.516628905878827,0,0,0,0.718618141816238,0.336672227908132,0,0.277064115484183,0,0,0,0,1.4351170855109,2.77624605464138,1.05965950579781,0.600182192168805,1.03052529238439,0.515281080091258,1.48893485065272,1.35021065793013,0.389748020644795,0.504867548488229,0.644349290496095,0.323292113637624,0,0,0,2.89891279744945,2.72746120590835,3.15485054927904,0,0,0,0,0,0,1.56449532329816,0,2.76269842704961,0.464367928031979,0.721879481669586,1.77460200059766,2.52877035117153,1.44606617930089,1.8749975364507,1.30727666455444,1.18635309555548,0.808987848960987,0.784885860501384,1.53898862778556,0,0,0,0,0,0,0,0,0,0,10.6457776846367,2.24803506515239,6.33332526193274,3.98130314181677,2.6064664424826,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,3.74935335947108,6.38332087155666,1.84307626415102,4.03013352162817,4.94077695473735,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0,0,0,0.57191197463259,1.08524321078289,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0.902838299183157,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,1.48864684691266,1.38115775959256,0.841980283299221,0.896974044789907,0,0.160853921143607,1.48418066444991,0,0,0.0821271560138091,0,0,0.120859449591622,2.20557117333613,9.30017988252553,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,4.59412430396938,5.20048196829217,0,0,0,0,0,0.107420244868274,0,0,0,10.4129496677416,3.65161127993702,1.91419068741876,3.0347334256665,0.464845549297286,2.51849877464512,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0.565621727814851,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0,0.294747123039363,0,0,0.422215270595328,0,0,0.349934720244983,6.44688155260931,7.37332503089366,2.17781969722645,0.0941438007767792,1.29151611801369,5.05414427002877,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,4.68435393131658,17.8462392676612,0.923403102045565,0,0.46112780877612,0.897576444097721,0.108647371922008,0.31900115973192,0.549585560411174,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,3.32629852184552,0.242780379534093,0,0,0,0,0,0,0.664653872707185,1.323967823502,1.56966459203613,0,0.284609546029793,2.91216813327591,0,9.2112853569515,0.870592065804026,0,0,1.06431964417994,2.55812609801649,1.47807822695777,3.58859361007152,0.264768380074501,0,0.137041924646751,0.19871461170299,0,0,0.160317640503067,0,0,3.60226042885265,0.114536596165916,0,1.58460277786965,0,4.47818665771911,0,0.104602846312333,0.611989305817931,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,1.5476039091159,0,4.69608562638973,0,0,0,0,2.30298236783334,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,12.1284838976335,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0.298509605773748,0.233713309847224,0,0,0,0,3.66144109435078,0.453692771289717,0,0,0,0,0,0.829412415681711,0.265841714557995,0,0,0,0,0,0,0,0,0,0.686791410365586,1.34699795506368,0,0,0.857766365499703,3.91491437947817,1.36023555307363,0.231522474323834,2.44736704506468,0.179088841081487,5.5584260488975,0,0,0.964570191354574,0.337884881306145,0,0,0,0,0,0,0.163565394255844,0.982829546539238,0.491545817507439,0.845248493434508,0,0,0,0,0.184105950251841,5.45530080105833,2.48830904013189,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,2.45369296252564,0.11796972334774,2.75142897782519,1.84841065840541,0.762764190934334,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,3.83287282918786,0,0,0,0,0.177404740325278,0,0.857440047187092,0,0,0.472775363535873,0,0,0,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| |||
|short_description=p3@IL20RB | |||
}} |
Latest revision as of 00:18, 25 September 2015
Short description: | p3@IL20RB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL20RB_5end |
Coexpression cluster: | C2720_salivary_cervical_epidermoid_malignant_Keratinocyte_Small_Sebocyte |
Association with transcript: | 2bp_to_ENST00000309741, ENST00000469964_5end |
EntrezGene: | IL20RB |
HGNC: | 6004 |
UniProt: | Q8IYY5F8WC67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.83e-31 | 42 |
epithelial cell | 4.28e-24 | 253 |
endodermal cell | 1.05e-23 | 58 |
epithelial cell of alimentary canal | 1.45e-18 | 20 |
respiratory epithelial cell | 5.27e-15 | 13 |
general ecto-epithelial cell | 4.48e-14 | 14 |
acinar cell | 3.68e-12 | 5 |
protein secreting cell | 4.98e-10 | 6 |
squamous epithelial cell | 1.91e-09 | 63 |
embryonic cell | 1.82e-08 | 250 |
epithelial cell of tracheobronchial tree | 2.99e-08 | 9 |
epithelial cell of lower respiratory tract | 2.99e-08 | 9 |
acinar cell of salivary gland | 3.67e-08 | 3 |
duct epithelial cell | 1.83e-07 | 3 |
branched duct epithelial cell | 1.83e-07 | 3 |
tracheal epithelial cell | 1.83e-07 | 3 |
tracheoblast | 1.83e-07 | 3 |
epithelial cell of Malassez | 3.18e-07 | 3 |
bronchial epithelial cell | 5.04e-07 | 3 |
gingival epithelial cell | 5.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.00e-17 | 99 |
respiratory system | 1.77e-16 | 74 |
respiratory tract | 6.59e-12 | 54 |
endoderm-derived structure | 5.04e-11 | 160 |
endoderm | 5.04e-11 | 160 |
presumptive endoderm | 5.04e-11 | 160 |
upper respiratory tract | 2.08e-09 | 19 |
larynx | 2.78e-09 | 9 |
oral opening | 2.92e-09 | 22 |
segment of respiratory tract | 7.54e-09 | 47 |
head | 1.54e-08 | 56 |
foregut | 5.58e-08 | 87 |
skin epidermis | 5.70e-08 | 15 |
outer epithelium | 5.70e-08 | 15 |
enveloping layer of ectoderm | 5.70e-08 | 15 |
mouth | 8.04e-08 | 29 |
stomodeum | 8.04e-08 | 29 |
skin of body | 1.82e-07 | 41 |
anterior region of body | 2.90e-07 | 62 |
craniocervical region | 2.90e-07 | 62 |
digestive system | 3.74e-07 | 145 |
digestive tract | 3.74e-07 | 145 |
primitive gut | 3.74e-07 | 145 |
lower respiratory tract epithelium | 5.04e-07 | 3 |
epithelium of bronchus | 5.04e-07 | 3 |
gingival epithelium | 5.14e-07 | 3 |
respiratory primordium | 5.17e-07 | 38 |
endoderm of foregut | 5.17e-07 | 38 |
mouth mucosa | 5.82e-07 | 13 |
orifice | 6.63e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.50e-11 | 14 |
carcinoma | 1.98e-07 | 106 |