FFCP PHASE1:Hg19::chrX:38211890..38211897,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5009 | |EntrezGene=5009 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8512 | |HGNC=8512 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000488812_5end | |association_with_transcript=32bp_to_ENST00000488812_5end | ||
|cluster_id=chrX:38211890..38211897,+ | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_3_at_OTC_5end | |description=CAGE_peak_3_at_OTC_5end | ||
|id=chrX:38211890..38211897,+ | |id=chrX:38211890..38211897,+ | ||
|ontology_enrichment_celltype=CL:0000181!8.43e-23!12;CL:0000417!8.43e-23!12;CL:0000668!8.43e-23!12;CL:0000414!8.43e-23!12;CL:0000412!8.43e-23!12;CL:0000182!8.43e-23!12 | |ontology_enrichment_celltype=CL:0000181!8.43e-23!12;CL:0000417!8.43e-23!12;CL:0000668!8.43e-23!12;CL:0000414!8.43e-23!12;CL:0000412!8.43e-23!12;CL:0000182!8.43e-23!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.40e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.47e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.04e-08;11!UBERON:0009497;5.26e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.98e-28!19;UBERON:0006925!8.98e-28!19;UBERON:0008836!8.98e-28!19;UBERON:0009497!2.96e-27!25;UBERON:0000015!2.96e-27!25;UBERON:0002423!2.96e-27!25;UBERON:0006235!2.96e-27!25;UBERON:0004161!2.96e-27!25;UBERON:0008835!6.46e-24!22;UBERON:0003894!6.46e-24!22;UBERON:0009854!7.46e-23!23;UBERON:0007499!5.55e-21!25;UBERON:0005057!3.73e-20!26;UBERON:0009856!3.73e-20!26;UBERON:0002365!8.20e-17!31;UBERON:0002330!8.20e-17!31;UBERON:0002368!7.99e-15!35;UBERON:0003929!3.56e-12!54;UBERON:0005172!6.14e-12!55;UBERON:0005173!6.14e-12!55;UBERON:0000949!2.16e-11!45;UBERON:0002417!1.12e-10!61;UBERON:0000916!1.12e-10!61;UBERON:0004921!1.32e-10!129;UBERON:0004185!1.32e-10!129;UBERON:0001007!3.64e-10!155;UBERON:0001555!3.64e-10!155;UBERON:0007026!3.64e-10!155;UBERON:0000160!6.00e-10!27;UBERON:0004119!3.59e-09!169;UBERON:0000925!3.59e-09!169;UBERON:0006595!3.59e-09!169;UBERON:0002530!1.56e-08!59;UBERON:0005911!1.04e-07!82;UBERON:0005409!1.04e-07!35;UBERON:0002108!2.13e-07!14 | |ontology_enrichment_uberon=UBERON:0002107!8.98e-28!19;UBERON:0006925!8.98e-28!19;UBERON:0008836!8.98e-28!19;UBERON:0009497!2.96e-27!25;UBERON:0000015!2.96e-27!25;UBERON:0002423!2.96e-27!25;UBERON:0006235!2.96e-27!25;UBERON:0004161!2.96e-27!25;UBERON:0008835!6.46e-24!22;UBERON:0003894!6.46e-24!22;UBERON:0009854!7.46e-23!23;UBERON:0007499!5.55e-21!25;UBERON:0005057!3.73e-20!26;UBERON:0009856!3.73e-20!26;UBERON:0002365!8.20e-17!31;UBERON:0002330!8.20e-17!31;UBERON:0002368!7.99e-15!35;UBERON:0003929!3.56e-12!54;UBERON:0005172!6.14e-12!55;UBERON:0005173!6.14e-12!55;UBERON:0000949!2.16e-11!45;UBERON:0002417!1.12e-10!61;UBERON:0000916!1.12e-10!61;UBERON:0004921!1.32e-10!129;UBERON:0004185!1.32e-10!129;UBERON:0001007!3.64e-10!155;UBERON:0001555!3.64e-10!155;UBERON:0007026!3.64e-10!155;UBERON:0000160!6.00e-10!27;UBERON:0004119!3.59e-09!169;UBERON:0000925!3.59e-09!169;UBERON:0006595!3.59e-09!169;UBERON:0002530!1.56e-08!59;UBERON:0005911!1.04e-07!82;UBERON:0005409!1.04e-07!35;UBERON:0002108!2.13e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.89e-36;4!UBERON:0002107;5.15e-17;19!UBERON:0006925;5.15e-17;19!UBERON:0002423;4.94e-13;25!UBERON:0000160;1.18e-10;17!UBERON:0002365;1.73e-10;31!UBERON:0002330;1.73e-10;31!UBERON:0002368;7.13e-09;33!UBERON:0005409;1.81e-08;22!UBERON:0002114;5.18e-08;2!UBERON:0001007;3.22e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.57e-36,4;UBERON:0002107,5.48e-17,19;UBERON:0006925,5.48e-17,19;UBERON:0008836,5.48e-17,19;UBERON:0008835,9.90e-15,22;UBERON:0003894,9.90e-15,22;UBERON:0009854,4.15e-14,23;UBERON:0007499,5.18e-13,25;UBERON:0009497,5.18e-13,25;UBERON:0000015,5.18e-13,25;UBERON:0002423,5.18e-13,25;UBERON:0006235,5.18e-13,25;UBERON:0004161,5.18e-13,25;UBERON:0009856,1.58e-12,26;UBERON:0000160,1.12e-10,17;UBERON:0002365,1.45e-10,31;UBERON:0002330,1.45e-10,31;UBERON:0002368,2.13e-09,35;UBERON:0002114,5.18e-08,2;UBERON:0004921,6.23e-08,118;UBERON:0005409,1.43e-07,25;UBERON:0000949,2.24e-07,45 | |||
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|short_description=p3@OTC | |short_description=p3@OTC | ||
}} | }} |
Latest revision as of 00:01, 25 September 2015
Short description: | p3@OTC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OTC_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 32bp_to_ENST00000488812_5end |
EntrezGene: | OTC |
HGNC: | 8512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.47e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.57e-36 | 4 |
liver | 5.48e-17 | 19 |
digestive gland | 5.48e-17 | 19 |
liver bud | 5.48e-17 | 19 |
hepatic diverticulum | 9.90e-15 | 22 |
liver primordium | 9.90e-15 | 22 |
digestive tract diverticulum | 4.15e-14 | 23 |
epithelial sac | 5.18e-13 | 25 |
epithelium of foregut-midgut junction | 5.18e-13 | 25 |
anatomical boundary | 5.18e-13 | 25 |
hepatobiliary system | 5.18e-13 | 25 |
foregut-midgut junction | 5.18e-13 | 25 |
septum transversum | 5.18e-13 | 25 |
sac | 1.58e-12 | 26 |
intestine | 1.12e-10 | 17 |
exocrine gland | 1.45e-10 | 31 |
exocrine system | 1.45e-10 | 31 |
endocrine gland | 2.13e-09 | 35 |
duodenum | 5.18e-08 | 2 |
subdivision of digestive tract | 6.23e-08 | 118 |
gastrointestinal system | 1.43e-07 | 25 |
endocrine system | 2.24e-07 | 45 |