FFCP PHASE1:Hg19::chr17:42988779..42988794,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt=A1L194 | |UniProt=A1L194 | ||
|association_with_transcript=3bp_to_BC127871_5end | |association_with_transcript=3bp_to_BC127871_5end | ||
|cluster_id=chr17:42988779..42988794,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_26_at_GFAP_5end | |description=CAGE_peak_26_at_GFAP_5end | ||
|id=chr17:42988779..42988794,- | |id=chr17:42988779..42988794,- | ||
|ontology_enrichment_celltype=CL:0000128!3.77e-12!7;CL:0000126!3.77e-12!7;CL:0000127!3.77e-12!7;CL:0002453!3.77e-12!7;CL:0002605!1.90e-11!3 | |ontology_enrichment_celltype=CL:0000128!3.77e-12!7;CL:0000126!3.77e-12!7;CL:0000127!3.77e-12!7;CL:0002453!3.77e-12!7;CL:0002605!1.90e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.49e-20;3!CL:0000128;5.66e-15;7!CL:0000126;5.66e-15;7!CL:0000127;5.66e-15;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.86e-20,3;CL:0000128,5.66e-15,7;CL:0000126,5.66e-15,7;CL:0000127,5.66e-15,7;CL:0002453,5.66e-15,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;6.92e-21;3!UBERON:0003057;6.92e-21;3!UBERON:0006601;5.36e-12;82!UBERON:0006222;6.97e-08;1!UBERON:0005425;6.97e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.87e-91!57;UBERON:0005068!6.87e-91!57;UBERON:0006241!6.87e-91!57;UBERON:0007135!6.87e-91!57;UBERON:0001017!9.16e-84!82;UBERON:0005743!1.92e-79!86;UBERON:0000073!1.69e-74!94;UBERON:0001016!1.69e-74!94;UBERON:0002616!9.58e-74!59;UBERON:0000955!7.47e-72!69;UBERON:0006238!7.47e-72!69;UBERON:0002780!3.37e-61!41;UBERON:0001890!3.37e-61!41;UBERON:0006240!3.37e-61!41;UBERON:0003075!3.83e-60!86;UBERON:0007284!3.83e-60!86;UBERON:0003080!1.36e-59!42;UBERON:0002020!1.54e-59!34;UBERON:0003528!1.54e-59!34;UBERON:0001893!2.88e-59!34;UBERON:0002346!4.89e-57!90;UBERON:0002791!1.80e-56!33;UBERON:0001869!4.42e-53!32;UBERON:0007023!2.11e-47!115;UBERON:0000033!1.27e-40!123;UBERON:0003056!6.18e-39!61;UBERON:0004121!8.56e-39!169;UBERON:0000153!2.83e-38!129;UBERON:0007811!2.83e-38!129;UBERON:0000924!1.20e-37!173;UBERON:0006601!1.20e-37!173;UBERON:0000956!1.21e-33!25;UBERON:0000203!1.21e-33!25;UBERON:0003076!1.16e-31!15;UBERON:0003057!1.16e-31!15;UBERON:0002308!8.55e-30!9;UBERON:0000125!8.55e-30!9;UBERON:0002619!2.00e-25!22;UBERON:0004732!2.96e-25!13;UBERON:0001950!5.54e-24!20;UBERON:0002420!3.17e-23!9;UBERON:0007245!3.17e-23!9;UBERON:0010009!3.17e-23!9;UBERON:0010011!3.17e-23!9;UBERON:0000454!3.17e-23!9;UBERON:0009663!3.85e-23!7;UBERON:0004733!3.51e-22!12;UBERON:0002028!3.51e-22!12;UBERON:0007277!3.51e-22!12;UBERON:0002298!3.94e-21!8;UBERON:0000025!4.93e-21!194;UBERON:0004111!6.09e-16!241;UBERON:0000200!1.05e-13!6;UBERON:0000369!1.06e-13!4;UBERON:0002435!1.06e-13!4;UBERON:0000204!1.06e-13!4;UBERON:0010082!1.06e-13!4;UBERON:0002680!2.43e-13!9;UBERON:0001895!2.43e-13!9;UBERON:0010092!2.43e-13!9;UBERON:0000064!6.57e-13!219;UBERON:0000477!9.78e-13!286;UBERON:0000475!5.68e-12!365;UBERON:0002240!7.90e-12!3;UBERON:0000483!1.03e-11!309;UBERON:0006331!1.44e-11!3;UBERON:0001896!1.49e-11!3;UBERON:0005290!1.49e-11!3;UBERON:0010096!1.49e-11!3;UBERON:0000119!1.68e-11!312;UBERON:0000988!2.59e-11!3;UBERON:0005383!5.32e-11!3;UBERON:0005382!5.32e-11!3;UBERON:0002771!8.25e-11!3;UBERON:0001871!1.52e-10!7;UBERON:0005162!1.95e-08!2;UBERON:0000122!1.95e-08!2;UBERON:0002148!2.25e-08!2;UBERON:0009662!2.25e-08!2;UBERON:0001897!5.59e-08!2;UBERON:0001873!5.59e-08!2;UBERON:0001875!5.59e-08!2;UBERON:0006514!5.59e-08!2;UBERON:0010122!5.59e-08!2;UBERON:0005174!3.12e-07!5;UBERON:0001137!3.12e-07!5;UBERON:0000062!6.52e-07!511;UBERON:0000922!7.12e-07!612 | |ontology_enrichment_uberon=UBERON:0001049!6.87e-91!57;UBERON:0005068!6.87e-91!57;UBERON:0006241!6.87e-91!57;UBERON:0007135!6.87e-91!57;UBERON:0001017!9.16e-84!82;UBERON:0005743!1.92e-79!86;UBERON:0000073!1.69e-74!94;UBERON:0001016!1.69e-74!94;UBERON:0002616!9.58e-74!59;UBERON:0000955!7.47e-72!69;UBERON:0006238!7.47e-72!69;UBERON:0002780!3.37e-61!41;UBERON:0001890!3.37e-61!41;UBERON:0006240!3.37e-61!41;UBERON:0003075!3.83e-60!86;UBERON:0007284!3.83e-60!86;UBERON:0003080!1.36e-59!42;UBERON:0002020!1.54e-59!34;UBERON:0003528!1.54e-59!34;UBERON:0001893!2.88e-59!34;UBERON:0002346!4.89e-57!90;UBERON:0002791!1.80e-56!33;UBERON:0001869!4.42e-53!32;UBERON:0007023!2.11e-47!115;UBERON:0000033!1.27e-40!123;UBERON:0003056!6.18e-39!61;UBERON:0004121!8.56e-39!169;UBERON:0000153!2.83e-38!129;UBERON:0007811!2.83e-38!129;UBERON:0000924!1.20e-37!173;UBERON:0006601!1.20e-37!173;UBERON:0000956!1.21e-33!25;UBERON:0000203!1.21e-33!25;UBERON:0003076!1.16e-31!15;UBERON:0003057!1.16e-31!15;UBERON:0002308!8.55e-30!9;UBERON:0000125!8.55e-30!9;UBERON:0002619!2.00e-25!22;UBERON:0004732!2.96e-25!13;UBERON:0001950!5.54e-24!20;UBERON:0002420!3.17e-23!9;UBERON:0007245!3.17e-23!9;UBERON:0010009!3.17e-23!9;UBERON:0010011!3.17e-23!9;UBERON:0000454!3.17e-23!9;UBERON:0009663!3.85e-23!7;UBERON:0004733!3.51e-22!12;UBERON:0002028!3.51e-22!12;UBERON:0007277!3.51e-22!12;UBERON:0002298!3.94e-21!8;UBERON:0000025!4.93e-21!194;UBERON:0004111!6.09e-16!241;UBERON:0000200!1.05e-13!6;UBERON:0000369!1.06e-13!4;UBERON:0002435!1.06e-13!4;UBERON:0000204!1.06e-13!4;UBERON:0010082!1.06e-13!4;UBERON:0002680!2.43e-13!9;UBERON:0001895!2.43e-13!9;UBERON:0010092!2.43e-13!9;UBERON:0000064!6.57e-13!219;UBERON:0000477!9.78e-13!286;UBERON:0000475!5.68e-12!365;UBERON:0002240!7.90e-12!3;UBERON:0000483!1.03e-11!309;UBERON:0006331!1.44e-11!3;UBERON:0001896!1.49e-11!3;UBERON:0005290!1.49e-11!3;UBERON:0010096!1.49e-11!3;UBERON:0000119!1.68e-11!312;UBERON:0000988!2.59e-11!3;UBERON:0005383!5.32e-11!3;UBERON:0005382!5.32e-11!3;UBERON:0002771!8.25e-11!3;UBERON:0001871!1.52e-10!7;UBERON:0005162!1.95e-08!2;UBERON:0000122!1.95e-08!2;UBERON:0002148!2.25e-08!2;UBERON:0009662!2.25e-08!2;UBERON:0001897!5.59e-08!2;UBERON:0001873!5.59e-08!2;UBERON:0001875!5.59e-08!2;UBERON:0006514!5.59e-08!2;UBERON:0010122!5.59e-08!2;UBERON:0005174!3.12e-07!5;UBERON:0001137!3.12e-07!5;UBERON:0000062!6.52e-07!511;UBERON:0000922!7.12e-07!612 | ||
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|short_description=p26@GFAP | |short_description=p26@GFAP | ||
}} | }} |
Latest revision as of 23:42, 24 September 2015
Short description: | p26@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 3bp_to_BC127871_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | A1L194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.86e-20 | 3 |
oligodendrocyte | 5.66e-15 | 7 |
macroglial cell | 5.66e-15 | 7 |
astrocyte | 5.66e-15 | 7 |
oligodendrocyte precursor cell | 5.66e-15 | 7 |