FFCP PHASE1:Hg19::chr2:223288872..223288887,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130367 | |EntrezGene=130367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19953 | |HGNC=19953 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWX5 | |UniProt=Q8IWX5 | ||
|association_with_transcript=-348bp_to_ENST00000321276_5end | |association_with_transcript=-348bp_to_ENST00000321276_5end | ||
|cluster_id=chr2:223288872..223288887,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_SGPP2_5end | |description=CAGE_peak_8_at_SGPP2_5end | ||
|id=chr2:223288872..223288887,+ | |id=chr2:223288872..223288887,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.73e-18!42;CL:0000860!4.83e-16!45;CL:0002009!1.17e-13!65;CL:0002194!1.94e-13!63;CL:0000576!1.94e-13!63;CL:0000040!1.94e-13!63;CL:0000559!1.94e-13!63;CL:0000557!1.11e-11!71;CL:0000839!3.76e-11!70;CL:0000766!1.48e-09!76;CL:0002087!2.22e-09!119;CL:0002031!6.45e-08!124;CL:0000738!8.72e-07!140 | |ontology_enrichment_celltype=CL:0002057!7.73e-18!42;CL:0000860!4.83e-16!45;CL:0002009!1.17e-13!65;CL:0002194!1.94e-13!63;CL:0000576!1.94e-13!63;CL:0000040!1.94e-13!63;CL:0000559!1.94e-13!63;CL:0000557!1.11e-11!71;CL:0000839!3.76e-11!70;CL:0000766!1.48e-09!76;CL:0002087!2.22e-09!119;CL:0002031!6.45e-08!124;CL:0000738!8.72e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.29e-36;33!CL:0002057;4.29e-36;33!CL:0000473;1.62e-27;39!CL:0000234;1.62e-27;39!CL:0000576;1.19e-18;48!CL:0000766;6.11e-13;69!CL:0002087;3.21e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.27e-36,42;CL:0002057,3.27e-36,42;CL:0000473,4.09e-34,48;CL:0000234,4.09e-34,48;CL:0002194,3.80e-26,59;CL:0000576,3.80e-26,59;CL:0000040,3.80e-26,59;CL:0000559,3.80e-26,59;CL:0002009,4.04e-25,61;CL:0000839,8.02e-23,66;CL:0000557,2.10e-22,67;CL:0000766,1.75e-20,72;CL:0002087,1.02e-14,115;CL:0002031,7.45e-14,120;CL:0000763,6.54e-12,108;CL:0000049,6.54e-12,108;CL:0000738,1.58e-11,136;CL:0002032,7.66e-09,161;CL:0000837,7.66e-09,161;CL:0000037,3.08e-08,168;CL:0000988,1.55e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-27;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.21e-19!57;UBERON:0005068!7.21e-19!57;UBERON:0006241!7.21e-19!57;UBERON:0007135!7.21e-19!57;UBERON:0007023!8.18e-17!115;UBERON:0002616!1.39e-15!59;UBERON:0003075!2.19e-14!86;UBERON:0007284!2.19e-14!86;UBERON:0002780!9.14e-14!41;UBERON:0001890!9.14e-14!41;UBERON:0006240!9.14e-14!41;UBERON:0000955!1.65e-13!69;UBERON:0006238!1.65e-13!69;UBERON:0002020!1.69e-13!34;UBERON:0003528!1.69e-13!34;UBERON:0003080!2.91e-13!42;UBERON:0002346!3.26e-13!90;UBERON:0001893!3.65e-13!34;UBERON:0002791!2.56e-12!33;UBERON:0001869!1.52e-11!32;UBERON:0001017!2.38e-11!82;UBERON:0003056!9.16e-11!61;UBERON:0005743!2.34e-10!86;UBERON:0002619!5.04e-10!22;UBERON:0000062!9.99e-10!511;UBERON:0001950!1.23e-09!20;UBERON:0002390!1.68e-09!102;UBERON:0003061!1.68e-09!102;UBERON:0002371!2.54e-09!80;UBERON:0000073!4.86e-09!94;UBERON:0001016!4.86e-09!94;UBERON:0000153!2.13e-08!129;UBERON:0007811!2.13e-08!129;UBERON:0000956!2.24e-08!25;UBERON:0000203!2.24e-08!25;UBERON:0002193!2.86e-08!112;UBERON:0001474!4.68e-08!86;UBERON:0002050!6.46e-08!605;UBERON:0005423!6.46e-08!605;UBERON:0000922!7.87e-08!612;UBERON:0000033!8.84e-08!123;UBERON:0000923!1.44e-07!604;UBERON:0005291!1.44e-07!604;UBERON:0006598!1.44e-07!604;UBERON:0002532!1.44e-07!604;UBERON:0002308!4.11e-07!9;UBERON:0000125!4.11e-07!9;UBERON:0003076!5.88e-07!15;UBERON:0003057!5.88e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;4.40e-10;6!UBERON:0000073;2.47e-08;53!UBERON:0002616;2.47e-08;53!UBERON:0002780;1.24e-07;41!UBERON:0001890;1.24e-07;41!UBERON:0003528;7.25e-07;34!UBERON:0002020;7.25e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-19,76;UBERON:0001474,2.41e-17,82;UBERON:0004765,2.46e-15,90;UBERON:0002405,1.14e-14,93;UBERON:0002390,1.18e-13,98;UBERON:0003061,1.18e-13,98;UBERON:0001434,2.80e-13,100;UBERON:0002193,6.54e-12,108;UBERON:0000073,7.37e-12,53;UBERON:0002616,7.37e-12,53;UBERON:0001049,4.65e-11,56;UBERON:0005068,4.65e-11,56;UBERON:0006241,4.65e-11,56;UBERON:0007135,4.65e-11,56;UBERON:0002298,5.77e-10,6;UBERON:0000955,1.04e-09,68;UBERON:0006238,1.04e-09,68;UBERON:0003528,1.24e-08,34;UBERON:0002020,1.24e-08,34;UBERON:0002780,2.00e-08,41;UBERON:0001890,2.00e-08,41;UBERON:0003080,2.00e-08,41;UBERON:0006240,2.00e-08,41;UBERON:0001017,1.20e-07,81;UBERON:0002791,1.93e-07,32;UBERON:0007023,4.31e-07,114;UBERON:0001893,6.27e-07,34 | |||
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|short_description=p8@SGPP2 | |short_description=p8@SGPP2 | ||
}} | }} |
Latest revision as of 23:28, 24 September 2015
Short description: | p8@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SGPP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -348bp_to_ENST00000321276_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.27e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.27e-36 | 42 |
defensive cell | 4.09e-34 | 48 |
phagocyte | 4.09e-34 | 48 |
monopoietic cell | 3.80e-26 | 59 |
monocyte | 3.80e-26 | 59 |
monoblast | 3.80e-26 | 59 |
promonocyte | 3.80e-26 | 59 |
macrophage dendritic cell progenitor | 4.04e-25 | 61 |
myeloid lineage restricted progenitor cell | 8.02e-23 | 66 |
granulocyte monocyte progenitor cell | 2.10e-22 | 67 |
myeloid leukocyte | 1.75e-20 | 72 |
nongranular leukocyte | 1.02e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 7.45e-14 | 120 |
myeloid cell | 6.54e-12 | 108 |
common myeloid progenitor | 6.54e-12 | 108 |
leukocyte | 1.58e-11 | 136 |
hematopoietic oligopotent progenitor cell | 7.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.66e-09 | 161 |
hematopoietic stem cell | 3.08e-08 | 168 |
hematopoietic cell | 1.55e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-19 | 76 |
bone element | 2.41e-17 | 82 |
skeletal element | 2.46e-15 | 90 |
immune system | 1.14e-14 | 93 |
hematopoietic system | 1.18e-13 | 98 |
blood island | 1.18e-13 | 98 |
skeletal system | 2.80e-13 | 100 |
hemolymphoid system | 6.54e-12 | 108 |
regional part of nervous system | 7.37e-12 | 53 |
regional part of brain | 7.37e-12 | 53 |
neural tube | 4.65e-11 | 56 |
neural rod | 4.65e-11 | 56 |
future spinal cord | 4.65e-11 | 56 |
neural keel | 4.65e-11 | 56 |
brainstem | 5.77e-10 | 6 |
brain | 1.04e-09 | 68 |
future brain | 1.04e-09 | 68 |
brain grey matter | 1.24e-08 | 34 |
gray matter | 1.24e-08 | 34 |
regional part of forebrain | 2.00e-08 | 41 |
forebrain | 2.00e-08 | 41 |
anterior neural tube | 2.00e-08 | 41 |
future forebrain | 2.00e-08 | 41 |
central nervous system | 1.20e-07 | 81 |
regional part of telencephalon | 1.93e-07 | 32 |
adult organism | 4.31e-07 | 114 |
telencephalon | 6.27e-07 | 34 |