FFCP PHASE1:Hg19::chr17:42984392..42984406,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=298bp_to_BC012228_5end | |association_with_transcript=298bp_to_BC012228_5end | ||
|cluster_id=chr17:42984392..42984406,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_GFAP_5end | |description=CAGE_peak_4_at_GFAP_5end | ||
|id=chr17:42984392..42984406,- | |id=chr17:42984392..42984406,- | ||
|ontology_enrichment_celltype=CL:0000128!5.89e-11!7;CL:0000126!5.89e-11!7;CL:0000127!5.89e-11!7;CL:0002453!5.89e-11!7;CL:0002605!1.50e-10!3;CL:0002319!3.85e-09!25;CL:0000047!6.09e-09!8 | |ontology_enrichment_celltype=CL:0000128!5.89e-11!7;CL:0000126!5.89e-11!7;CL:0000127!5.89e-11!7;CL:0002453!5.89e-11!7;CL:0002605!1.50e-10!3;CL:0002319!3.85e-09!25;CL:0000047!6.09e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.96e-12;3!CL:0002319;3.07e-09;25!CL:0000128;6.27e-09;7!CL:0000126;6.27e-09;7!CL:0000127;6.27e-09;7!CL:0000047;1.20e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.96e-12,3;CL:0000047,1.14e-10,8;CL:0002319,3.09e-09,25;CL:0000128,6.47e-09,7;CL:0000126,6.47e-09,7;CL:0000127,6.47e-09,7;CL:0002453,6.47e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.25e-18;82!UBERON:0006241;1.09e-12;3!UBERON:0003057;1.09e-12;3!UBERON:0010122;1.29e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.14e-115!57;UBERON:0005068!2.14e-115!57;UBERON:0006241!2.14e-115!57;UBERON:0007135!2.14e-115!57;UBERON:0001017!8.58e-106!82;UBERON:0005743!5.54e-104!86;UBERON:0000073!8.93e-97!94;UBERON:0001016!8.93e-97!94;UBERON:0002616!3.30e-96!59;UBERON:0000955!1.83e-87!69;UBERON:0006238!1.83e-87!69;UBERON:0002780!3.77e-84!41;UBERON:0001890!3.77e-84!41;UBERON:0006240!3.77e-84!41;UBERON:0003075!1.42e-82!86;UBERON:0007284!1.42e-82!86;UBERON:0003080!5.83e-82!42;UBERON:0002020!1.05e-80!34;UBERON:0003528!1.05e-80!34;UBERON:0001893!5.93e-80!34;UBERON:0002346!2.23e-78!90;UBERON:0002791!1.99e-77!33;UBERON:0001869!4.29e-74!32;UBERON:0003056!4.39e-60!61;UBERON:0000956!4.79e-55!25;UBERON:0000203!4.79e-55!25;UBERON:0000033!3.18e-53!123;UBERON:0004121!1.85e-52!169;UBERON:0000924!5.95e-51!173;UBERON:0006601!5.95e-51!173;UBERON:0000153!3.38e-50!129;UBERON:0007811!3.38e-50!129;UBERON:0007023!1.49e-49!115;UBERON:0002619!2.70e-46!22;UBERON:0001950!8.27e-41!20;UBERON:0003076!1.24e-32!15;UBERON:0003057!1.24e-32!15;UBERON:0000025!6.73e-27!194;UBERON:0002308!7.81e-27!9;UBERON:0000125!7.81e-27!9;UBERON:0004732!1.35e-26!13;UBERON:0002420!2.68e-26!9;UBERON:0007245!2.68e-26!9;UBERON:0010009!2.68e-26!9;UBERON:0010011!2.68e-26!9;UBERON:0000454!2.68e-26!9;UBERON:0004733!6.96e-24!12;UBERON:0002028!6.96e-24!12;UBERON:0007277!6.96e-24!12;UBERON:0009663!6.08e-21!7;UBERON:0004111!2.56e-20!241;UBERON:0002298!5.64e-19!8;UBERON:0000200!1.68e-17!6;UBERON:0001871!1.85e-17!7;UBERON:0000477!4.38e-17!286;UBERON:0000064!2.45e-16!219;UBERON:0002680!1.32e-15!9;UBERON:0001895!1.32e-15!9;UBERON:0010092!1.32e-15!9;UBERON:0000349!5.19e-15!5;UBERON:0000483!8.03e-15!309;UBERON:0000119!1.47e-14!312;UBERON:0000475!1.23e-13!365;UBERON:0000369!1.92e-12!4;UBERON:0002435!1.92e-12!4;UBERON:0000204!1.92e-12!4;UBERON:0010082!1.92e-12!4;UBERON:0002240!9.35e-11!3;UBERON:0006331!1.20e-10!3;UBERON:0001896!1.87e-10!3;UBERON:0005290!1.87e-10!3;UBERON:0010096!1.87e-10!3;UBERON:0000988!4.29e-10!3;UBERON:0005383!4.70e-10!3;UBERON:0005382!4.70e-10!3;UBERON:0002021!6.16e-10!5;UBERON:0002771!6.56e-10!3;UBERON:0001872!2.45e-09!5;UBERON:0000062!3.44e-08!511;UBERON:0000481!4.48e-08!347;UBERON:0002037!5.15e-08!6;UBERON:0006215!5.15e-08!6;UBERON:0000922!8.70e-08!612;UBERON:0002148!1.35e-07!2;UBERON:0009662!1.35e-07!2;UBERON:0000923!1.79e-07!604;UBERON:0005291!1.79e-07!604;UBERON:0006598!1.79e-07!604;UBERON:0002532!1.79e-07!604;UBERON:0002050!1.95e-07!605;UBERON:0005423!1.95e-07!605;UBERON:0001873!2.03e-07!2;UBERON:0010122!2.03e-07!2;UBERON:0001897!2.16e-07!2;UBERON:0000467!2.67e-07!625;UBERON:0000480!2.89e-07!626;UBERON:0001954!3.04e-07!2;UBERON:0003022!3.04e-07!2;UBERON:0002421!3.04e-07!2;UBERON:0002600!3.04e-07!2;UBERON:0001894!3.05e-07!7;UBERON:0006222!3.05e-07!7;UBERON:0001875!3.55e-07!2;UBERON:0006514!3.55e-07!2;UBERON:0005162!3.77e-07!2;UBERON:0000122!3.77e-07!2;UBERON:0001876!4.81e-07!2;UBERON:0001870!9.83e-07!2;UBERON:0000468!9.95e-07!659 | |ontology_enrichment_uberon=UBERON:0001049!2.14e-115!57;UBERON:0005068!2.14e-115!57;UBERON:0006241!2.14e-115!57;UBERON:0007135!2.14e-115!57;UBERON:0001017!8.58e-106!82;UBERON:0005743!5.54e-104!86;UBERON:0000073!8.93e-97!94;UBERON:0001016!8.93e-97!94;UBERON:0002616!3.30e-96!59;UBERON:0000955!1.83e-87!69;UBERON:0006238!1.83e-87!69;UBERON:0002780!3.77e-84!41;UBERON:0001890!3.77e-84!41;UBERON:0006240!3.77e-84!41;UBERON:0003075!1.42e-82!86;UBERON:0007284!1.42e-82!86;UBERON:0003080!5.83e-82!42;UBERON:0002020!1.05e-80!34;UBERON:0003528!1.05e-80!34;UBERON:0001893!5.93e-80!34;UBERON:0002346!2.23e-78!90;UBERON:0002791!1.99e-77!33;UBERON:0001869!4.29e-74!32;UBERON:0003056!4.39e-60!61;UBERON:0000956!4.79e-55!25;UBERON:0000203!4.79e-55!25;UBERON:0000033!3.18e-53!123;UBERON:0004121!1.85e-52!169;UBERON:0000924!5.95e-51!173;UBERON:0006601!5.95e-51!173;UBERON:0000153!3.38e-50!129;UBERON:0007811!3.38e-50!129;UBERON:0007023!1.49e-49!115;UBERON:0002619!2.70e-46!22;UBERON:0001950!8.27e-41!20;UBERON:0003076!1.24e-32!15;UBERON:0003057!1.24e-32!15;UBERON:0000025!6.73e-27!194;UBERON:0002308!7.81e-27!9;UBERON:0000125!7.81e-27!9;UBERON:0004732!1.35e-26!13;UBERON:0002420!2.68e-26!9;UBERON:0007245!2.68e-26!9;UBERON:0010009!2.68e-26!9;UBERON:0010011!2.68e-26!9;UBERON:0000454!2.68e-26!9;UBERON:0004733!6.96e-24!12;UBERON:0002028!6.96e-24!12;UBERON:0007277!6.96e-24!12;UBERON:0009663!6.08e-21!7;UBERON:0004111!2.56e-20!241;UBERON:0002298!5.64e-19!8;UBERON:0000200!1.68e-17!6;UBERON:0001871!1.85e-17!7;UBERON:0000477!4.38e-17!286;UBERON:0000064!2.45e-16!219;UBERON:0002680!1.32e-15!9;UBERON:0001895!1.32e-15!9;UBERON:0010092!1.32e-15!9;UBERON:0000349!5.19e-15!5;UBERON:0000483!8.03e-15!309;UBERON:0000119!1.47e-14!312;UBERON:0000475!1.23e-13!365;UBERON:0000369!1.92e-12!4;UBERON:0002435!1.92e-12!4;UBERON:0000204!1.92e-12!4;UBERON:0010082!1.92e-12!4;UBERON:0002240!9.35e-11!3;UBERON:0006331!1.20e-10!3;UBERON:0001896!1.87e-10!3;UBERON:0005290!1.87e-10!3;UBERON:0010096!1.87e-10!3;UBERON:0000988!4.29e-10!3;UBERON:0005383!4.70e-10!3;UBERON:0005382!4.70e-10!3;UBERON:0002021!6.16e-10!5;UBERON:0002771!6.56e-10!3;UBERON:0001872!2.45e-09!5;UBERON:0000062!3.44e-08!511;UBERON:0000481!4.48e-08!347;UBERON:0002037!5.15e-08!6;UBERON:0006215!5.15e-08!6;UBERON:0000922!8.70e-08!612;UBERON:0002148!1.35e-07!2;UBERON:0009662!1.35e-07!2;UBERON:0000923!1.79e-07!604;UBERON:0005291!1.79e-07!604;UBERON:0006598!1.79e-07!604;UBERON:0002532!1.79e-07!604;UBERON:0002050!1.95e-07!605;UBERON:0005423!1.95e-07!605;UBERON:0001873!2.03e-07!2;UBERON:0010122!2.03e-07!2;UBERON:0001897!2.16e-07!2;UBERON:0000467!2.67e-07!625;UBERON:0000480!2.89e-07!626;UBERON:0001954!3.04e-07!2;UBERON:0003022!3.04e-07!2;UBERON:0002421!3.04e-07!2;UBERON:0002600!3.04e-07!2;UBERON:0001894!3.05e-07!7;UBERON:0006222!3.05e-07!7;UBERON:0001875!3.55e-07!2;UBERON:0006514!3.55e-07!2;UBERON:0005162!3.77e-07!2;UBERON:0000122!3.77e-07!2;UBERON:0001876!4.81e-07!2;UBERON:0001870!9.83e-07!2;UBERON:0000468!9.95e-07!659 | ||
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|short_description=p4@GFAP | |short_description=p4@GFAP | ||
}} | }} |
Latest revision as of 23:20, 24 September 2015
Short description: | p4@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 298bp_to_BC012228_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.96e-12 | 3 |
neuronal stem cell | 1.14e-10 | 8 |
neural cell | 3.09e-09 | 25 |
oligodendrocyte | 6.47e-09 | 7 |
macroglial cell | 6.47e-09 | 7 |
astrocyte | 6.47e-09 | 7 |
oligodendrocyte precursor cell | 6.47e-09 | 7 |