FFCP PHASE1:Hg19::chrX:37545026..37545064,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7504 | |EntrezGene=7504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12811 | |HGNC=12811 | ||
|TSSclassifier=strong | |||
|UniProt=P51811 | |UniProt=P51811 | ||
|association_with_transcript=14bp_to_ENST00000378616_5end | |association_with_transcript=14bp_to_ENST00000378616_5end | ||
|cluster_id=chrX:37545026..37545064,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_XK_5end | |description=CAGE_peak_1_at_XK_5end | ||
|id=chrX:37545026..37545064,+ | |id=chrX:37545026..37545064,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.53e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.37e-14!106;DOID:162!3.09e-09!235;DOID:0050687!3.59e-09!143;DOID:14566!2.42e-08!239;DOID:8692!4.87e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.01e-09;31!DOID:1036;1.93e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.25e-10,31;DOID:305,3.16e-09,106;DOID:1036,2.04e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-43!115;UBERON:0001049!2.22e-13!57;UBERON:0005068!2.22e-13!57;UBERON:0006241!2.22e-13!57;UBERON:0007135!2.22e-13!57;UBERON:0003080!4.73e-10!42;UBERON:0002616!4.90e-10!59;UBERON:0004921!9.11e-10!129;UBERON:0004185!9.11e-10!129;UBERON:0002780!9.28e-10!41;UBERON:0001890!9.28e-10!41;UBERON:0006240!9.28e-10!41;UBERON:0000178!1.19e-09!15;UBERON:0000179!1.19e-09!15;UBERON:0000463!1.19e-09!15;UBERON:0003075!1.30e-09!86;UBERON:0007284!1.30e-09!86;UBERON:0001017!9.90e-09!82;UBERON:0002346!1.11e-08!90;UBERON:0000955!1.33e-08!69;UBERON:0006238!1.33e-08!69;UBERON:0002619!1.85e-08!22;UBERON:0005743!2.10e-08!86;UBERON:0001007!2.12e-08!155;UBERON:0001555!2.12e-08!155;UBERON:0007026!2.12e-08!155;UBERON:0001893!3.46e-08!34;UBERON:0002020!4.06e-08!34;UBERON:0003528!4.06e-08!34;UBERON:0001869!7.55e-08!32;UBERON:0001950!8.08e-08!20;UBERON:0002791!9.58e-08!33;UBERON:0004119!1.29e-07!169;UBERON:0000925!1.29e-07!169;UBERON:0006595!1.29e-07!169;UBERON:0000077!8.09e-07!130 | |ontology_enrichment_uberon=UBERON:0007023!1.35e-43!115;UBERON:0001049!2.22e-13!57;UBERON:0005068!2.22e-13!57;UBERON:0006241!2.22e-13!57;UBERON:0007135!2.22e-13!57;UBERON:0003080!4.73e-10!42;UBERON:0002616!4.90e-10!59;UBERON:0004921!9.11e-10!129;UBERON:0004185!9.11e-10!129;UBERON:0002780!9.28e-10!41;UBERON:0001890!9.28e-10!41;UBERON:0006240!9.28e-10!41;UBERON:0000178!1.19e-09!15;UBERON:0000179!1.19e-09!15;UBERON:0000463!1.19e-09!15;UBERON:0003075!1.30e-09!86;UBERON:0007284!1.30e-09!86;UBERON:0001017!9.90e-09!82;UBERON:0002346!1.11e-08!90;UBERON:0000955!1.33e-08!69;UBERON:0006238!1.33e-08!69;UBERON:0002619!1.85e-08!22;UBERON:0005743!2.10e-08!86;UBERON:0001007!2.12e-08!155;UBERON:0001555!2.12e-08!155;UBERON:0007026!2.12e-08!155;UBERON:0001893!3.46e-08!34;UBERON:0002020!4.06e-08!34;UBERON:0003528!4.06e-08!34;UBERON:0001869!7.55e-08!32;UBERON:0001950!8.08e-08!20;UBERON:0002791!9.58e-08!33;UBERON:0004119!1.29e-07!169;UBERON:0000925!1.29e-07!169;UBERON:0006595!1.29e-07!169;UBERON:0000077!8.09e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.21e-12;15!UBERON:0000179;3.21e-12;15!UBERON:0000463;3.21e-12;15!UBERON:0005409;1.80e-09;22!UBERON:0007023;2.75e-08;114!UBERON:0000160;2.89e-08;17!UBERON:0004921;4.06e-08;33!UBERON:0002619;1.96e-07;22!UBERON:0001950;2.37e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.46e-33,114;UBERON:0011216,3.90e-12,223;UBERON:0000178,7.83e-12,15;UBERON:0000179,7.83e-12,15;UBERON:0000463,7.83e-12,15;UBERON:0004921,1.92e-11,118;UBERON:0005409,4.33e-09,25;UBERON:0001007,8.48e-09,145;UBERON:0001555,8.48e-09,145;UBERON:0007026,8.48e-09,145;UBERON:0001049,1.95e-08,56;UBERON:0005068,1.95e-08,56;UBERON:0006241,1.95e-08,56;UBERON:0007135,1.95e-08,56;UBERON:0000160,2.99e-08,17;UBERON:0000073,6.83e-08,53;UBERON:0002616,6.83e-08,53;UBERON:0001041,1.31e-07,87;UBERON:0002619,1.52e-07,22;UBERON:0001950,1.93e-07,20;UBERON:0004119,2.33e-07,160;UBERON:0000925,2.33e-07,160;UBERON:0006595,2.33e-07,160 | |||
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| ||
|short_description=p1@XK | |short_description=p1@XK | ||
}} | }} |
Latest revision as of 23:07, 24 September 2015
Short description: | p1@XK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XK_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 14bp_to_ENST00000378616_5end |
EntrezGene: | XK |
HGNC: | 12811 |
UniProt: | P51811 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.46e-33 | 114 |
organ system subdivision | 3.90e-12 | 223 |
blood | 7.83e-12 | 15 |
haemolymphatic fluid | 7.83e-12 | 15 |
organism substance | 7.83e-12 | 15 |
subdivision of digestive tract | 1.92e-11 | 118 |
gastrointestinal system | 4.33e-09 | 25 |
digestive system | 8.48e-09 | 145 |
digestive tract | 8.48e-09 | 145 |
primitive gut | 8.48e-09 | 145 |
neural tube | 1.95e-08 | 56 |
neural rod | 1.95e-08 | 56 |
future spinal cord | 1.95e-08 | 56 |
neural keel | 1.95e-08 | 56 |
intestine | 2.99e-08 | 17 |
regional part of nervous system | 6.83e-08 | 53 |
regional part of brain | 6.83e-08 | 53 |
foregut | 1.31e-07 | 87 |
regional part of cerebral cortex | 1.52e-07 | 22 |
neocortex | 1.93e-07 | 20 |
endoderm-derived structure | 2.33e-07 | 160 |
endoderm | 2.33e-07 | 160 |
presumptive endoderm | 2.33e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.25e-10 | 31 |
carcinoma | 3.16e-09 | 106 |
chronic leukemia | 2.04e-07 | 8 |