FFCP PHASE1:Hg19::chr4:120549931..120549938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8654 | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |HGNC=8784 | ||
|TSSclassifier=strong | |||
|UniProt=O76074 | |UniProt=O76074 | ||
|association_with_transcript=42bp_to_NM_001083,uc003idh.2_5end | |association_with_transcript=42bp_to_NM_001083,uc003idh.2_5end | ||
|cluster_id=chr4:120549931..120549938,- | |||
|coexpression_cluster_id=C1933 | |coexpression_cluster_id=C1933 | ||
|description=CAGE_peak_21_at_PDE5A_5end | |description=CAGE_peak_21_at_PDE5A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002622!2.17e-07!3;CL:0002504!7.00e-07!3;CL:1000279!7.00e-07!3;CL:1000280!7.00e-07!3 | |ontology_enrichment_celltype=CL:0002622!2.17e-07!3;CL:0002504!7.00e-07!3;CL:1000279!7.00e-07!3;CL:1000280!7.00e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002622;2.18e-38;3!CL:0000222;2.05e-29;1!CL:1000487;1.91e-15;2!CL:0002504;9.43e-11;3!CL:1000279;9.43e-11;3!CL:1000280;9.43e-11;3 | |ontology_enrichment_celltype_v019=CL:0002622;2.18e-38;3!CL:0000222;2.05e-29;1!CL:1000487;1.91e-15;2!CL:0002504;9.43e-11;3!CL:1000279;9.43e-11;3!CL:1000280;9.43e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.80e-38,3;CL:1000487,1.78e-15,2;CL:0002504,9.90e-11,3;CL:1000279,9.90e-11,3;CL:1000280,9.90e-11,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002367;9.38e-24;11!UBERON:0010147;9.38e-24;11!UBERON:0003937;7.56e-22;12!UBERON:0005399;7.56e-22;12!UBERON:0003101;2.80e-12;22!UBERON:0000079;2.80e-12;22!UBERON:0000077;3.87e-10;27 | |ontology_enrichment_uberon_v019=UBERON:0002367;9.38e-24;11!UBERON:0010147;9.38e-24;11!UBERON:0003937;7.56e-22;12!UBERON:0005399;7.56e-22;12!UBERON:0003101;2.80e-12;22!UBERON:0000079;2.80e-12;22!UBERON:0000077;3.87e-10;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,8.35e-24,11;UBERON:0010147,8.35e-24,11;UBERON:0009846,8.35e-24,11;UBERON:0003353,8.35e-24,11;UBERON:0004902,8.35e-24,11;UBERON:0003820,8.35e-24,11;UBERON:0009847,8.35e-24,11;UBERON:0003937,6.79e-22,12;UBERON:0005399,6.79e-22,12;UBERON:0000162,6.89e-19,14;UBERON:0001353,6.89e-19,14;UBERON:0000163,6.89e-19,14;UBERON:0006866,6.89e-19,14;UBERON:0000164,6.89e-19,14;UBERON:0000931,6.89e-19,14;UBERON:0004122,1.10e-17,15;UBERON:0001046,3.96e-14,19;UBERON:0003101,2.64e-12,22;UBERON:0000079,2.64e-12,22;UBERON:0003064,8.05e-10,28;UBERON:0000077,1.66e-09,29;UBERON:0000161,8.74e-08,36;UBERON:0005153,1.36e-07,37 | |||
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| ||
|short_description=p21@PDE5A | |short_description=p21@PDE5A | ||
}} | }} |
Latest revision as of 23:05, 24 September 2015
Short description: | p21@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_PDE5A_5end |
Coexpression cluster: | C1933_glioblastoma_small_Prostate_Smooth_rhabdomyosarcoma_normal_sacrococcigeal |
Association with transcript: | 42bp_to_NM_001083, uc003idh.2_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | O76074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.80e-38 | 3 |
smooth muscle cell of prostate | 1.78e-15 | 2 |
enteric smooth muscle cell | 9.90e-11 | 3 |
smooth muscle cell of large intestine | 9.90e-11 | 3 |
smooth muscle cell of colon | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 8.35e-24 | 11 |
male accessory sex gland | 8.35e-24 | 11 |
embryonic cloacal epithelium | 8.35e-24 | 11 |
epithelium of hindgut | 8.35e-24 | 11 |
urogenital sinus epithelium | 8.35e-24 | 11 |
prostate bud | 8.35e-24 | 11 |
prostate field | 8.35e-24 | 11 |
sex gland | 6.79e-22 | 12 |
male reproductive gland | 6.79e-22 | 12 |
cloaca | 6.89e-19 | 14 |
anal region | 6.89e-19 | 14 |
embryonic cloaca | 6.89e-19 | 14 |
terminal part of digestive tract | 6.89e-19 | 14 |
primitive urogenital sinus | 6.89e-19 | 14 |
proctodeum | 6.89e-19 | 14 |
genitourinary system | 1.10e-17 | 15 |
hindgut | 3.96e-14 | 19 |
male organism | 2.64e-12 | 22 |
male reproductive system | 2.64e-12 | 22 |
intermediate mesoderm | 8.05e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 1.66e-09 | 29 |
orifice | 8.74e-08 | 36 |
epithelial bud | 1.36e-07 | 37 |