FFCP PHASE1:Hg19::chr17:42462703..42462743,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:42462703..42462743,- to FFCP PHASE1:Hg19::chr17:42462703..42462743,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3674 | |EntrezGene=3674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6138 | |HGNC=6138 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z8B0 | |UniProt=B7Z8B0 | ||
|association_with_transcript=-15bp_to_ENST00000377068_5end | |||
|cluster_id=chr17:42462703..42462743,- | |||
|description=CAGE_peak_4_at_ITGA2B_5end | |||
|id=chr17:42462703..42462743,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.46e-13;5!CL:0000039;1.02e-09;7!CL:0000586;1.02e-09;7!CL:0002321;5.11e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.10e-13,5;CL:0000039,6.09e-10,7;CL:0000586,6.09e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.45e-08;3 | |||
|ontology_enrichment_disease=DOID:0050687!7.70e-15!143;DOID:305!2.23e-12!106;DOID:162!3.29e-09!235;DOID:14566!5.61e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.73e-14;22!DOID:2994;1.73e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.26e-16,143;DOID:3095,8.69e-15,22;DOID:2994,8.69e-15,22;DOID:305,1.27e-11,106;DOID:162,5.53e-09,235;DOID:14566,1.38e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.45e-12!57;UBERON:0005068!1.45e-12!57;UBERON:0006241!1.45e-12!57;UBERON:0007135!1.45e-12!57;UBERON:0002346!5.17e-12!90;UBERON:0003075!2.47e-11!86;UBERON:0007284!2.47e-11!86;UBERON:0005743!9.82e-11!86;UBERON:0001017!1.33e-10!82;UBERON:0000073!1.37e-10!94;UBERON:0001016!1.37e-10!94;UBERON:0002616!1.44e-10!59;UBERON:0000955!6.72e-10!69;UBERON:0006238!6.72e-10!69;UBERON:0007023!2.28e-08!115;UBERON:0003080!4.08e-08!42;UBERON:0002780!1.04e-07!41;UBERON:0001890!1.04e-07!41;UBERON:0006240!1.04e-07!41;UBERON:0002020!1.46e-07!34;UBERON:0003528!1.46e-07!34;UBERON:0001893!1.67e-07!34;UBERON:0000956!1.91e-07!25;UBERON:0000203!1.91e-07!25;UBERON:0001869!2.89e-07!32;UBERON:0000924!2.94e-07!173;UBERON:0006601!2.94e-07!173;UBERON:0002791!3.39e-07!33;UBERON:0003056!3.71e-07!61;UBERON:0001950!4.68e-07!20;UBERON:0002619!7.63e-07!22;UBERON:0004121!9.53e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.19e-11;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0,0,0,0.492484232307152,0.204000691244253,0.626909442956176,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,2.64240395401362,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0.538168907066586,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0.323292113637624,0,0,0.169560592310488,0,0,0,2.80539524098069,3.31324420803713,3.02104251460748,1.65857688024593,3.02785021050754,1.45990943630332,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.220587945464788,0.217879444092406,0.474541238222193,0.539325232640658,0.196221465125346,1.15424147083917,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0.579652024875384,0,0,0,0,3.1608175918371,2.57545848628462,0,0.234004265139238,0,0,0,0,0,0.290633938513962,0,0,0,0,0.720599767084807,0.88369703398466,0.190493682876507,0,0,0,0,0.300343057843917,0,0.112131084345361,0.87192013766656,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.671624264166535,0,0,0.769350375349168,0,0,0.103041011647722,0.366277859273374,0.247528499761764,0,0,0,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0.379473173765715,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0.689170200620878,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,2.94048259177238,0,1.44269212976445,0,0.159426272728822,0,2.10655907145603,0,0.973865820823666,0,0,0,0,0,0,0,0.851692475380653,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.844016498463076,0,0.16480387422676,4.64475897881586,0.19924798825107,0.552567831062295,2.26739473068848,0.102268682502155,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0.520855522170466,0,0.724999575434793,1.137934482855,0.762760950878299,1.18193840883968,2.75794698593172,2.33283690706603,5.38237484293206,0,0.964771509003264,1.52581736317083,2.76448149828062,2.65992857058193,0.658156191461918,2.28770773389879,0.139423744278603,0.615602068030377,0,1.84451123510448,8.97576444097721,2.93347904189422,0,0,0,0,0.156980256395025,0.166211681900156,0.451191321234361,0.588187602953219,0.839107934879214,0.189753732724185,0,0,0,0.565412285735763,3.02944095638928,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0.067401132980677,1.60515529459758,0,0,0.978323094660449,0,0.789168805698781,0,0.61214552326098,0.31593289814244,0.60129367765797,0.622129148383483,1.32930774541437,0.330991955875499,0.313932918407225,1.19472429772959,1.13843818411917,0,0.173559738335131,0.195984794828755,0.261177619741208,2.44617335538842,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0.353024506766001,0.451961481561065,0,0.19871461170299,0.569797163602908,3.91102765469606,0.0801588202515337,0.426905989478705,0.19980960958213,0,0,0.343189995723929,0,0.49701014226173,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,1.39775300349294,0,0.223171457441873,0.0671834724867263,0,0,0.157566364614447,0,0,0.0984274815147488,0,0,0.544813624446302,3.21506296930038,3.57602535152808,2.9080823662043,0,0,0.485996453264197,0,0.157611414598396,1.04909176269996,0,0.179287339332845,1.53532157855556,1.42939065274673,0,0,0,0,0.326587360109409,3.59190574687462,0,0,2.60617810496289,0,0,0.387848869084652,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,0.2506898940227,1.83807346058077,0.655745261419609,0,0,0.854183854313742,1.001527445652,0.573409195690071,0.887432412294818,0.18628920882415,1.52183498429854,0.37494122388632,0,0.570930667089935,0,2.34167452903441,0.724605143054126,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0.231522474323834,0.244736704506468,0.71635536432595,0.308801447160972,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0.911579868532147,1.10606748921385,0,0.132864840313363,0,0.327609848846413,0,0,0.19998739585493,0.426766918776564,0,0.567515953566836,0.184105950251841,0,0,3.58104239650225,0,3.61711666268562,0.764467467344097,1.01839517972415,0,1.23935764259002,0,0,0.867479195013787,0.80057074828547,0,0,0.385375350578757,1.41696576325585,0.957803154342908,0.205116364240755,0.504143392443436,0.829887029570615,0.484426936895553,0,0.0981477185010256,0.235939446695481,0,0.462102664601353,0,0,0.596748666348824,0.300841313397029,1.0085253435176,0,4.45241380618418,0.49131575253029,0,0.405225507710368,0,0.206686796501184,0.317079050969534,1.09394961803644,0,0,0.175871244359621,0.255524855279191,0,1.3451348888753,0.606965604236632,0.682986574053893,0.177404740325278,0.230467975111559,0,0.271878931907327,0.460409414939944,2.48207065856333,2.66955364540966,0.078493092850514,0.314231179832004,0,0.913158720509496,0.647782773655864,1.43325506366115,1.07214816264985,0,0,0.521574816907738,0,0,0,0,0,0.118332000730565,0,0.846774100381858,1.14553434272025,0.31020638566432,0.955538938977433,1.11855431797792,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0.233939463462106,1.79055697645231,0.713520544665411,0.33883824611688,6.0467284209986,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,1.6906229103336,0,0,0.128915775947154,0,0.357107877211315,0,0.0802413666891683,0.730336388246517,0,0.286679166302903,0.315543124386369,0.271965960763659,0.872701380680755,1.0580536810308,0,0,0,1.51399709802095,1.96678029534652,2.78736702225161,0.61193297845189,3.47382626845229,0,5.0141507858475,0.303114792872958,0.803892390468535,0,0.310298987585686,0,1.1903221573187,0,0.124149428591716,0.224263725161227,1.0820016907288,1.21270313374932,0,1.36893320434112,0.134704106029175,0,1.66330178273007,0.651226148887796,2.66818364694289,0,0,2.34640942403454,0.977931553462932,1.22068853494722,0,0.402547587182052,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0,0,0,0.492484232307152,0.204000691244253,0.626909442956176,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,2.64240395401362,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0.538168907066586,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0.323292113637624,0,0,0.169560592310488,0,0,0,2.80539524098069,3.31324420803713,3.02104251460748,1.65857688024593,3.02785021050754,1.45990943630332,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.220587945464788,0.217879444092406,0.474541238222193,0.539325232640658,0.196221465125346,1.15424147083917,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0.579652024875384,0,0,0,0,3.1608175918371,2.57545848628462,0,0.234004265139238,0,0,0,0,0,0.290633938513962,0,0,0,0,0.720599767084807,0.88369703398466,0.190493682876507,0,0,0,0,0.300343057843917,0,0.112131084345361,0.87192013766656,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.671624264166535,0,0,0.769350375349168,0,0,0.103041011647722,0.366277859273374,0.247528499761764,0,0,0,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0.379473173765715,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0.689170200620878,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,2.94048259177238,0,1.44269212976445,0,0.159426272728822,0,2.10655907145603,0,0.973865820823666,0,0,0,0,0,0,0,0.851692475380653,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.844016498463076,0,0.16480387422676,4.64475897881586,0.19924798825107,0.552567831062295,2.26739473068848,0.102268682502155,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0.520855522170466,0,0.724999575434793,1.137934482855,0.762760950878299,1.18193840883968,2.75794698593172,2.33283690706603,5.38237484293206,0,0.964771509003264,1.52581736317083,2.76448149828062,2.65992857058193,0.658156191461918,2.28770773389879,0.139423744278603,0.615602068030377,0,1.84451123510448,8.97576444097721,2.93347904189422,0,0,0,0,0.156980256395025,0.166211681900156,0.451191321234361,0.588187602953219,0.839107934879214,0.189753732724185,0,0,0,0.565412285735763,3.02944095638928,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0.067401132980677,1.60515529459758,0,0,0.978323094660449,0,0.789168805698781,0,0.61214552326098,0.31593289814244,0.60129367765797,0.622129148383483,1.32930774541437,0.330991955875499,0.313932918407225,1.19472429772959,1.13843818411917,0,0.173559738335131,0.195984794828755,0.261177619741208,2.44617335538842,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0.353024506766001,0.451961481561065,0,0.19871461170299,0.569797163602908,3.91102765469606,0.0801588202515337,0.426905989478705,0.19980960958213,0,0,0.343189995723929,0,0.49701014226173,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,1.39775300349294,0,0.223171457441873,0.0671834724867263,0,0,0.157566364614447,0,0,0.0984274815147488,0,0,0.544813624446302,3.21506296930038,3.57602535152808,2.9080823662043,0,0,0.485996453264197,0,0.157611414598396,1.04909176269996,0,0.179287339332845,1.53532157855556,1.42939065274673,0,0,0,0,0.326587360109409,3.59190574687462,0,0,2.60617810496289,0,0,0.387848869084652,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,0.2506898940227,1.83807346058077,0.655745261419609,0,0,0.854183854313742,1.001527445652,0.573409195690071,0.887432412294818,0.18628920882415,1.52183498429854,0.37494122388632,0,0.570930667089935,0,2.34167452903441,0.724605143054126,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0.231522474323834,0.244736704506468,0.71635536432595,0.308801447160972,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0.911579868532147,1.10606748921385,0,0.132864840313363,0,0.327609848846413,0,0,0.19998739585493,0.426766918776564,0,0.567515953566836,0.184105950251841,0,0,3.58104239650225,0,3.61711666268562,0.764467467344097,1.01839517972415,0,1.23935764259002,0,0,0.867479195013787,0.80057074828547,0,0,0.385375350578757,1.41696576325585,0.957803154342908,0.205116364240755,0.504143392443436,0.829887029570615,0.484426936895553,0,0.0981477185010256,0.235939446695481,0,0.462102664601353,0,0,0.596748666348824,0.300841313397029,1.0085253435176,0,4.45241380618418,0.49131575253029,0,0.405225507710368,0,0.206686796501184,0.317079050969534,1.09394961803644,0,0,0.175871244359621,0.255524855279191,0,1.3451348888753,0.606965604236632,0.682986574053893,0.177404740325278,0.230467975111559,0,0.271878931907327,0.460409414939944,2.48207065856333,2.66955364540966,0.078493092850514,0.314231179832004,0,0.913158720509496,0.647782773655864,1.43325506366115,1.07214816264985,0,0,0.521574816907738,0,0,0,0,0,0.118332000730565,0,0.846774100381858,1.14553434272025,0.31020638566432,0.955538938977433,1.11855431797792,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0.233939463462106,1.79055697645231,0.713520544665411,0.33883824611688,6.0467284209986,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,1.6906229103336,0,0,0.128915775947154,0,0.357107877211315,0,0.0802413666891683,0.730336388246517,0,0.286679166302903,0.315543124386369,0.271965960763659,0.872701380680755,1.0580536810308,0,0,0,1.51399709802095,1.96678029534652,2.78736702225161,0.61193297845189,3.47382626845229,0,5.0141507858475,0.303114792872958,0.803892390468535,0,0.310298987585686,0,1.1903221573187,0,0.124149428591716,0.224263725161227,1.0820016907288,1.21270313374932,0,1.36893320434112,0.134704106029175,0,1.66330178273007,0.651226148887796,2.66818364694289,0,0,2.34640942403454,0.977931553462932,1.22068853494722,0,0.402547587182052,0 | ||
|short_description=p4@ITGA2B | |||
}} | }} |
Latest revision as of 21:26, 24 September 2015
Short description: | p4@ITGA2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGA2B_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000377068_5end |
EntrezGene: | ITGA2B |
HGNC: | 6138 |
UniProt: | B7Z8B0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.10e-13 | 5 |
germ line cell | 6.09e-10 | 7 |
germ cell | 6.09e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.26e-16 | 143 |
germ cell and embryonal cancer | 8.69e-15 | 22 |
germ cell cancer | 8.69e-15 | 22 |
carcinoma | 1.27e-11 | 106 |
cancer | 5.53e-09 | 235 |
disease of cellular proliferation | 1.38e-08 | 239 |