FFCP PHASE1:Hg19::chr2:220290396..220290425,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1674 | |EntrezGene=1674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2770 | |HGNC=2770 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=154bp_to_ENST00000483395_5end | |association_with_transcript=154bp_to_ENST00000483395_5end | ||
|cluster_id=chr2:220290396..220290425,+ | |||
|coexpression_cluster_id=C305 | |||
|description=CAGE_peak_3_at_DES_5end | |description=CAGE_peak_3_at_DES_5end | ||
|id=chr2:220290396..220290425,+ | |id=chr2:220290396..220290425,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.44e-12!9 | |ontology_enrichment_celltype=CL:0000188!1.44e-12!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;5.13e-12;65!UBERON:0005062;6.56e-09;4!UBERON:0007284;6.56e-09;4!UBERON:0007297;1.22e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.79e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.87e-24!115;UBERON:0004151!7.09e-08!3;UBERON:0006947!1.13e-07!3;UBERON:0004054!1.13e-07!3;UBERON:0003978!1.50e-07!3;UBERON:0009751!1.50e-07!3;UBERON:0000946!1.50e-07!3;UBERON:0002523!1.50e-07!3;UBERON:0005983!1.50e-07!3;UBERON:0002165!1.50e-07!3;UBERON:0002062!1.50e-07!3;UBERON:0007280!1.50e-07!3;UBERON:0000481!1.69e-07!347;UBERON:0003104!2.15e-07!238;UBERON:0009142!2.15e-07!238;UBERON:0002385!6.60e-07!63;UBERON:0001015!6.60e-07!63;UBERON:0000383!6.60e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.76e-12;3!UBERON:0006947;7.81e-12;3!UBERON:0004054;7.81e-12;3!UBERON:0003978;9.74e-12;3!UBERON:0000946;9.74e-12;3!UBERON:0000160;3.84e-11;17!UBERON:0007100;8.68e-11;25!UBERON:0005409;1.06e-10;22!UBERON:0004921;1.73e-09;33!UBERON:0005904;5.57e-09;4!UBERON:0005090;7.43e-09;2!UBERON:0001630;7.43e-09;2!UBERON:0002081;1.15e-08;2!UBERON:0000341;2.05e-08;2!UBERON:0002133;2.05e-08;2!UBERON:0000922;4.20e-08;49!UBERON:0001134;7.10e-08;16!UBERON:0002036;7.10e-08;16!UBERON:0000059;8.09e-08;11!UBERON:0004175;2.12e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.91e-22,114;UBERON:0004151,2.86e-12,3;UBERON:0006947,6.27e-12,3;UBERON:0004054,6.27e-12,3;UBERON:0003978,1.01e-11,3;UBERON:0009751,1.01e-11,3;UBERON:0000946,1.01e-11,3;UBERON:0002523,1.01e-11,3;UBERON:0005983,1.01e-11,3;UBERON:0002165,1.01e-11,3;UBERON:0002062,1.01e-11,3;UBERON:0007280,1.01e-11,3;UBERON:0000160,3.68e-11,17;UBERON:0007100,7.63e-10,27;UBERON:0005409,2.85e-09,25;UBERON:0005904,4.74e-09,4;UBERON:0003103,5.10e-09,68;UBERON:0005090,7.29e-09,2;UBERON:0001630,7.29e-09,2;UBERON:0002081,1.19e-08,2;UBERON:0010227,1.19e-08,2;UBERON:0000341,1.67e-08,2;UBERON:0002133,2.25e-08,2;UBERON:0000059,7.22e-08,11 | |||
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| ||
|short_description=p3@DES | |short_description=p3@DES | ||
}} | }} |
Latest revision as of 20:55, 24 September 2015
Short description: | p3@DES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DES_5end |
Coexpression cluster: | C305_heart_skeletal_smooth_left_bladder_penis_esophagus |
Association with transcript: | 154bp_to_ENST00000483395_5end |
EntrezGene: | DES |
HGNC: | 2770 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.91e-22 | 114 |
cardiac chamber | 2.86e-12 | 3 |
male genital duct | 6.27e-12 | 3 |
internal male genitalia | 6.27e-12 | 3 |
valve | 1.01e-11 | 3 |
cardiac mesenchyme | 1.01e-11 | 3 |
cardial valve | 1.01e-11 | 3 |
tunica intima | 1.01e-11 | 3 |
heart layer | 1.01e-11 | 3 |
endocardium | 1.01e-11 | 3 |
endocardial cushion | 1.01e-11 | 3 |
presumptive endocardium | 1.01e-11 | 3 |
intestine | 3.68e-11 | 17 |
primary circulatory organ | 7.63e-10 | 27 |
gastrointestinal system | 2.85e-09 | 25 |
duct of male reproductive system | 4.74e-09 | 4 |
compound organ | 5.10e-09 | 68 |
muscle structure | 7.29e-09 | 2 |
muscle organ | 7.29e-09 | 2 |
cardiac atrium | 1.19e-08 | 2 |
future cardiac atrium | 1.19e-08 | 2 |
throat | 1.67e-08 | 2 |
atrioventricular valve | 2.25e-08 | 2 |
large intestine | 7.22e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.79e-09 | 2 |