FFCP PHASE1:Hg19::chr4:1165106..1165131,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=10417 | |EntrezGene=10417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11253 | |HGNC=11253 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-248bp_to_ENST00000509697_5end | |association_with_transcript=-248bp_to_ENST00000509697_5end | ||
|cluster_id=chr4:1165106..1165131,- | |||
|coexpression_cluster_id=C574 | |coexpression_cluster_id=C574 | ||
|description=CAGE_peak_15_at_SPON2_5end | |description=CAGE_peak_15_at_SPON2_5end | ||
Latest revision as of 20:24, 24 September 2015
| Short description: | p15@SPON2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_15_at_SPON2_5end |
| Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
| Association with transcript: | -248bp_to_ENST00000509697_5end |
| EntrezGene: | SPON2 |
| HGNC: | 11253 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p15@SPON2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fat cell | 2.97e-22 | 15 |
| prostate stromal cell | 1.79e-17 | 3 |
| adipocyte of omentum tissue | 2.00e-17 | 3 |
| enteric smooth muscle cell | 3.48e-17 | 3 |
| smooth muscle cell of large intestine | 3.48e-17 | 3 |
| smooth muscle cell of colon | 3.48e-17 | 3 |
| subcutaneous fat cell | 3.68e-17 | 3 |
| light melanocyte | 4.58e-17 | 3 |
| adipocyte of breast | 1.07e-11 | 2 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| hypodermis | 1.18e-17 | 5 |
| subcutaneous adipose tissue | 3.68e-17 | 3 |
| omentum | 8.65e-15 | 6 |
| peritoneum | 8.65e-15 | 6 |
| abdominal cavity | 8.65e-15 | 6 |
| visceral peritoneum | 8.65e-15 | 6 |
| prostate gland | 2.04e-08 | 11 |
| male accessory sex gland | 2.04e-08 | 11 |
| embryonic cloacal epithelium | 2.04e-08 | 11 |
| epithelium of hindgut | 2.04e-08 | 11 |
Showing 1 to 10 of 17 entries
