FFCP PHASE1:Hg19::chr16:15815450..15815461,-: Difference between revisions
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|id=chr16:15815450..15815461,-
|short_description=p28@MYH11
|description=CAGE_peak_28_at_MYH11_5end
|association_with_transcript=-14bp_to_BC080545_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4629 | |EntrezGene=4629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7569 | |HGNC=7569 | ||
|TSSclassifier=strong | |||
|UniProt=Q66K75 | |UniProt=Q66K75 | ||
|association_with_transcript=-14bp_to_BC080545_5end | |||
|cluster_id=chr16:15815450..15815461,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_28_at_MYH11_5end | |||
|id=chr16:15815450..15815461,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.18e-19;1!UBERON:0004874;2.25e-19;1!UBERON:0009143;2.71e-19;1!UBERON:0007297;1.64e-10;2!UBERON:0006965;3.13e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.61e-31!115;UBERON:0006947!6.18e-18!3;UBERON:0004054!6.18e-18!3;UBERON:0005904!1.40e-13!4;UBERON:0003135!1.20e-12!11;UBERON:0003101!1.17e-08!22;UBERON:0000079!1.17e-08!22;UBERON:0003978!2.37e-08!3;UBERON:0009751!2.37e-08!3;UBERON:0000946!2.37e-08!3;UBERON:0002523!2.37e-08!3;UBERON:0005983!2.37e-08!3;UBERON:0002165!2.37e-08!3;UBERON:0002062!2.37e-08!3;UBERON:0007280!2.37e-08!3;UBERON:0000059!3.49e-08!11;UBERON:0003133!6.78e-08!48;UBERON:0005156!1.24e-07!59;UBERON:0000990!1.24e-07!59;UBERON:0004175!1.25e-07!25;UBERON:0001000!3.13e-07!1;UBERON:0005352!3.13e-07!1;UBERON:0000998!3.32e-07!1;UBERON:0006868!3.32e-07!1;UBERON:0002146!3.73e-07!1;UBERON:0005623!3.73e-07!1;UBERON:0000989!3.95e-07!1;UBERON:0008811!3.95e-07!1;UBERON:0006258!3.95e-07!1;UBERON:0005876!3.95e-07!1;UBERON:0004874!3.95e-07!1;UBERON:0000996!4.43e-07!1;UBERON:0006834!5.89e-07!1;UBERON:0001301!6.99e-07!1;UBERON:0005418!8.27e-07!1;UBERON:0001389!8.27e-07!1;UBERON:0000026!8.27e-07!1;UBERON:0008784!8.27e-07!1;UBERON:0006058!8.27e-07!1;UBERON:0003663!8.27e-07!1;UBERON:0001383!8.27e-07!1;UBERON:0004256!8.27e-07!1;UBERON:0002529!8.27e-07!1;UBERON:0004708!8.27e-07!1;UBERON:0002101!8.27e-07!1;UBERON:0004709!8.27e-07!1;UBERON:0003661!8.27e-07!1;UBERON:0002471!8.27e-07!1;UBERON:0004357!8.27e-07!1;UBERON:0009872!8.27e-07!1;UBERON:0004347!8.27e-07!1;UBERON:0005420!8.27e-07!1;UBERON:0005732!8.27e-07!1;UBERON:0006057!8.27e-07!1;UBERON:0000978!8.27e-07!1;UBERON:0002103!8.27e-07!1;UBERON:0001665!8.27e-07!1;UBERON:0003823!8.27e-07!1;UBERON:0000154!8.27e-07!1;UBERON:0005733!8.27e-07!1;UBERON:0005730!8.27e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.34e-25;3!UBERON:0004054;2.34e-25;3!UBERON:0001000;1.18e-19;1!UBERON:0000998;1.18e-19;1!UBERON:0006868;1.18e-19;1!UBERON:0005352;1.18e-19;1!UBERON:0002146;1.71e-19;1!UBERON:0005623;1.71e-19;1!UBERON:0000989;2.25e-19;1!UBERON:0008811;2.25e-19;1!UBERON:0005904;2.71e-19;4!UBERON:0000996;4.28e-19;1!UBERON:0003135;1.45e-15;11!UBERON:0001255;1.98e-10;2!UBERON:0001556;1.98e-10;2!UBERON:0004175;2.07e-08;21!UBERON:0000058;2.72e-08;10!UBERON:0003101;4.33e-08;22!UBERON:0000079;4.33e-08;22!UBERON:0003978;2.25e-07;3!UBERON:0000946;2.25e-07;3!UBERON:0001043;2.63e-07;3!UBERON:0002114;3.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.34e-25,3;UBERON:0004054,2.34e-25,3;UBERON:0001000,1.08e-19,1;UBERON:0005352,1.08e-19,1;UBERON:0000998,1.30e-19,1;UBERON:0006868,1.30e-19,1;UBERON:0002146,1.88e-19,1;UBERON:0005623,1.88e-19,1;UBERON:0000989,2.25e-19,1;UBERON:0008811,2.25e-19,1;UBERON:0006258,2.25e-19,1;UBERON:0005876,2.25e-19,1;UBERON:0004874,2.25e-19,1;UBERON:0005904,2.71e-19,4;UBERON:0000996,3.25e-19,1;UBERON:0003135,1.45e-15,11;UBERON:0007023,2.64e-12,114;UBERON:0003064,1.06e-10,28;UBERON:0001255,1.89e-10,2;UBERON:0001556,1.89e-10,2;UBERON:0003101,4.34e-08,22;UBERON:0000079,4.34e-08,22;UBERON:0004876,1.46e-07,11;UBERON:0003978,2.32e-07,3;UBERON:0009751,2.32e-07,3;UBERON:0000946,2.32e-07,3;UBERON:0002523,2.32e-07,3;UBERON:0005983,2.32e-07,3;UBERON:0002165,2.32e-07,3;UBERON:0002062,2.32e-07,3;UBERON:0007280,2.32e-07,3;UBERON:0001043,2.63e-07,3;UBERON:0009143,2.63e-07,3;UBERON:0002114,3.35e-07,2;UBERON:0004175,3.64e-07,25 | |||
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|short_description=p28@MYH11 | |||
}} | }} |
Latest revision as of 19:43, 24 September 2015
Short description: | p28@MYH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_MYH11_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -14bp_to_BC080545_5end |
EntrezGene: | MYH11 |
HGNC: | 7569 |
UniProt: | Q66K75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.34e-25 | 3 |
internal male genitalia | 2.34e-25 | 3 |
vas deferens | 1.08e-19 | 1 |
spermatic cord | 1.08e-19 | 1 |
seminal vesicle | 1.30e-19 | 1 |
seminal fluid secreting gland | 1.30e-19 | 1 |
pulmonary valve | 1.88e-19 | 1 |
semi-lunar valve | 1.88e-19 | 1 |
penis | 2.25e-19 | 1 |
intromittent organ | 2.25e-19 | 1 |
lateral plate mesenchyme | 2.25e-19 | 1 |
undifferentiated genital tubercle | 2.25e-19 | 1 |
somatopleure | 2.25e-19 | 1 |
duct of male reproductive system | 2.71e-19 | 4 |
vagina | 3.25e-19 | 1 |
male reproductive organ | 1.45e-15 | 11 |
adult organism | 2.64e-12 | 114 |
intermediate mesoderm | 1.06e-10 | 28 |
urinary bladder | 1.89e-10 | 2 |
lower urinary tract | 1.89e-10 | 2 |
male organism | 4.34e-08 | 22 |
male reproductive system | 4.34e-08 | 22 |
urogenital ridge | 1.46e-07 | 11 |
valve | 2.32e-07 | 3 |
cardiac mesenchyme | 2.32e-07 | 3 |
cardial valve | 2.32e-07 | 3 |
tunica intima | 2.32e-07 | 3 |
heart layer | 2.32e-07 | 3 |
endocardium | 2.32e-07 | 3 |
endocardial cushion | 2.32e-07 | 3 |
presumptive endocardium | 2.32e-07 | 3 |
esophagus | 2.63e-07 | 3 |
esophageal region | 2.63e-07 | 3 |
duodenum | 3.35e-07 | 2 |
internal genitalia | 3.64e-07 | 25 |