FFCP PHASE1:Hg19::chr20:22566089..22566097,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3170 | |EntrezGene=3170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5022 | |HGNC=5022 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y261 | |UniProt=Q9Y261 | ||
|association_with_transcript=0bp_to_ENST00000377115_5end | |association_with_transcript=0bp_to_ENST00000377115_5end | ||
|cluster_id=chr20:22566089..22566097,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_6_at_FOXA2_5end | |description=CAGE_peak_6_at_FOXA2_5end | ||
|id=chr20:22566089..22566097,- | |id=chr20:22566089..22566097,- | ||
|ontology_enrichment_celltype=CL:0000181!2.62e-37!12;CL:0000417!2.62e-37!12;CL:0000668!2.62e-37!12;CL:0000414!2.62e-37!12;CL:0000412!2.62e-37!12;CL:0000182!2.62e-37!12;CL:0000223!9.59e-24!59;CL:0000066!3.56e-10!254;CL:0002178!5.68e-10!3;CL:0002076!6.06e-07!43 | |ontology_enrichment_celltype=CL:0000181!2.62e-37!12;CL:0000417!2.62e-37!12;CL:0000668!2.62e-37!12;CL:0000414!2.62e-37!12;CL:0000412!2.62e-37!12;CL:0000182!2.62e-37!12;CL:0000223!9.59e-24!59;CL:0000066!3.56e-10!254;CL:0002178!5.68e-10!3;CL:0002076!6.06e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.94e-89;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.95e-89,12;CL:0000223,1.58e-18,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.43e-50;11!UBERON:0009497;3.26e-42;13!UBERON:0001041;1.69e-18;30!UBERON:0003104;7.26e-18;31!CL:0000223;2.80e-12;58 | |||
|ontology_enrichment_disease=DOID:305!9.41e-12!106;DOID:3119!5.00e-08!14;DOID:0050687!5.69e-08!143;DOID:5409!7.70e-08!4 | |ontology_enrichment_disease=DOID:305!9.41e-12!106;DOID:3119!5.00e-08!14;DOID:0050687!5.69e-08!143;DOID:5409!7.70e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:7;7.04e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.90e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0009497!1.99e-32!25;UBERON:0000015!1.99e-32!25;UBERON:0002423!1.99e-32!25;UBERON:0006235!1.99e-32!25;UBERON:0004161!1.99e-32!25;UBERON:0008835!6.98e-31!22;UBERON:0003894!6.98e-31!22;UBERON:0009854!1.82e-29!23;UBERON:0002107!2.64e-29!19;UBERON:0006925!2.64e-29!19;UBERON:0008836!2.64e-29!19;UBERON:0007499!5.65e-27!25;UBERON:0009856!7.15e-26!26;UBERON:0005911!2.99e-21!82;UBERON:0005057!4.92e-21!26;UBERON:0003929!1.37e-19!54;UBERON:0000077!1.75e-17!130;UBERON:0002365!2.07e-17!31;UBERON:0002330!2.07e-17!31;UBERON:0001041!3.06e-17!98;UBERON:0004921!1.29e-15!129;UBERON:0004185!1.29e-15!129;UBERON:0004119!1.33e-15!169;UBERON:0000925!1.33e-15!169;UBERON:0006595!1.33e-15!169;UBERON:0002368!2.96e-15!35;UBERON:0000466!2.25e-14!126;UBERON:0001007!6.39e-14!155;UBERON:0001555!6.39e-14!155;UBERON:0007026!6.39e-14!155;UBERON:0005172!1.05e-13!55;UBERON:0005173!1.05e-13!55;UBERON:0005177!1.35e-13!107;UBERON:0009569!1.04e-12!113;UBERON:0002417!3.67e-12!61;UBERON:0000916!3.67e-12!61;UBERON:0000949!1.53e-11!45;UBERON:0002530!2.02e-10!59;UBERON:0003104!7.76e-09!238;UBERON:0009142!7.76e-09!238;UBERON:0001048!1.24e-08!168;UBERON:0002100!6.09e-07!216 | |ontology_enrichment_uberon=UBERON:0009497!1.99e-32!25;UBERON:0000015!1.99e-32!25;UBERON:0002423!1.99e-32!25;UBERON:0006235!1.99e-32!25;UBERON:0004161!1.99e-32!25;UBERON:0008835!6.98e-31!22;UBERON:0003894!6.98e-31!22;UBERON:0009854!1.82e-29!23;UBERON:0002107!2.64e-29!19;UBERON:0006925!2.64e-29!19;UBERON:0008836!2.64e-29!19;UBERON:0007499!5.65e-27!25;UBERON:0009856!7.15e-26!26;UBERON:0005911!2.99e-21!82;UBERON:0005057!4.92e-21!26;UBERON:0003929!1.37e-19!54;UBERON:0000077!1.75e-17!130;UBERON:0002365!2.07e-17!31;UBERON:0002330!2.07e-17!31;UBERON:0001041!3.06e-17!98;UBERON:0004921!1.29e-15!129;UBERON:0004185!1.29e-15!129;UBERON:0004119!1.33e-15!169;UBERON:0000925!1.33e-15!169;UBERON:0006595!1.33e-15!169;UBERON:0002368!2.96e-15!35;UBERON:0000466!2.25e-14!126;UBERON:0001007!6.39e-14!155;UBERON:0001555!6.39e-14!155;UBERON:0007026!6.39e-14!155;UBERON:0005172!1.05e-13!55;UBERON:0005173!1.05e-13!55;UBERON:0005177!1.35e-13!107;UBERON:0009569!1.04e-12!113;UBERON:0002417!3.67e-12!61;UBERON:0000916!3.67e-12!61;UBERON:0000949!1.53e-11!45;UBERON:0002530!2.02e-10!59;UBERON:0003104!7.76e-09!238;UBERON:0009142!7.76e-09!238;UBERON:0001048!1.24e-08!168;UBERON:0002100!6.09e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.10e-73;19!UBERON:0006925;2.10e-73;19!UBERON:0002423;7.87e-56;25!UBERON:0002365;2.24e-44;31!UBERON:0002330;2.24e-44;31!UBERON:0002368;1.96e-37;33!UBERON:0000949;2.97e-29;43!UBERON:0005172;4.96e-17;52!UBERON:0005173;4.96e-17;52!UBERON:0002417;1.83e-15;58!UBERON:0000916;1.83e-15;58!UBERON:0002530;1.62e-14;57!UBERON:0001007;8.61e-10;81!UBERON:0009569;3.25e-07;110 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.74e-73,19;UBERON:0006925,1.74e-73,19;UBERON:0008836,1.74e-73,19;UBERON:0008835,1.72e-63,22;UBERON:0003894,1.72e-63,22;UBERON:0009854,9.72e-61,23;UBERON:0007499,6.82e-56,25;UBERON:0009497,6.82e-56,25;UBERON:0000015,6.82e-56,25;UBERON:0002423,6.82e-56,25;UBERON:0006235,6.82e-56,25;UBERON:0004161,6.82e-56,25;UBERON:0009856,9.50e-54,26;UBERON:0002365,4.24e-45,31;UBERON:0002330,4.24e-45,31;UBERON:0002368,5.90e-40,35;UBERON:0000949,4.36e-31,45;UBERON:0003929,6.64e-26,54;UBERON:0005172,6.64e-26,54;UBERON:0005173,6.64e-26,54;UBERON:0002530,1.05e-23,59;UBERON:0002417,2.61e-23,60;UBERON:0000916,2.61e-23,60;UBERON:0005911,4.96e-17,82;UBERON:0001041,4.81e-16,87;UBERON:0005177,8.49e-14,101;UBERON:0009569,2.01e-12,112;UBERON:0003914,6.98e-12,117;UBERON:0004921,1.12e-11,118;UBERON:0005256,2.19e-11,122;UBERON:0001007,1.80e-09,145;UBERON:0001555,1.80e-09,145;UBERON:0007026,1.80e-09,145;UBERON:0000490,2.44e-09,148;UBERON:0001048,1.29e-08,160;UBERON:0003104,1.29e-08,160;UBERON:0009142,1.29e-08,160;UBERON:0004119,1.47e-08,160;UBERON:0000925,1.47e-08,160;UBERON:0006595,1.47e-08,160;UBERON:0000025,4.39e-07,192;UBERON:0002100,7.38e-07,199 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,5.89696330006576,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,1.6544468284517,2.14281231791033,1.41547442093788,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75862680413699,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0.603851374266694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,5.89696330006576,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,1.6544468284517,2.14281231791033,1.41547442093788,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75862680413699,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0.603851374266694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@FOXA2 | |short_description=p6@FOXA2 | ||
}} | }} |
Latest revision as of 19:05, 24 September 2015
Short description: | p6@FOXA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FOXA2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000377115_5end |
EntrezGene: | FOXA2 |
HGNC: | 5022 |
UniProt: | Q9Y261 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.95e-89 | 12 |
endodermal cell | 1.58e-18 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.90e-09 | 39 |