FFCP PHASE1:Hg19::chr11:82708519..82708523,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27314 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9770 | |||
|TSSclassifier=strong | |||
|UniProt=E9PS06 | |||
|association_with_transcript=0bp_to_ENST00000534301_5end | |||
|cluster_id=chr11:82708519..82708523,- | |||
|description=CAGE_peak_15_at_RAB30_5end | |||
|id=chr11:82708519..82708523,- | |||
|ontology_enrichment_celltype=CL:0000945!6.01e-15!24;CL:0000826!6.01e-15!24;CL:0000542!6.54e-08!53;CL:0000051!6.54e-08!53;CL:0000838!8.53e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.25e-19;1!UBERON:0006298;3.25e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.60e-17!115;UBERON:0004177!2.38e-11!7;UBERON:0002106!2.65e-10!3;UBERON:0004854!2.65e-10!3;UBERON:0009034!2.65e-10!3;UBERON:0002095!2.65e-10!3;UBERON:0004782!2.65e-10!3;UBERON:0003281!2.65e-10!3;UBERON:0009664!2.65e-10!3;UBERON:0002296!2.65e-10!3;UBERON:0005602!2.65e-10!3;UBERON:0001179!2.65e-10!3;UBERON:0006293!2.65e-10!3;UBERON:0003408!3.21e-08!10;UBERON:0001829!4.30e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.18e-19;1!UBERON:0001961;1.18e-19;1!UBERON:0001744;1.18e-19;1!UBERON:0001042;1.18e-19;1!UBERON:0001735;1.18e-19;1!UBERON:0001154;3.25e-19;1!UBERON:0001736;3.25e-19;1!UBERON:0001153;3.25e-19;1!UBERON:0009854;3.25e-19;1!UBERON:0004921;1.18e-11;33!UBERON:0000341;1.64e-10;2!UBERON:0006562;1.64e-10;2!UBERON:0001829;2.72e-10;2!UBERON:0000160;1.16e-09;17!UBERON:0001155;6.35e-09;9!UBERON:0005409;1.10e-07;22!UBERON:0000059;1.84e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.30e-19,1;UBERON:0001961,1.30e-19,1;UBERON:0001744,1.30e-19,1;UBERON:0001735,1.30e-19,1;UBERON:0001154,2.25e-19,1;UBERON:0001153,2.25e-19,1;UBERON:0001045,2.25e-19,1;UBERON:0001736,3.91e-19,1;UBERON:0006298,3.91e-19,1;UBERON:0000341,1.89e-10,2;UBERON:0001829,2.99e-10,2;UBERON:0000160,1.07e-09,17;UBERON:0001155,5.87e-09,9;UBERON:0000059,1.73e-07,11;UBERON:0005409,6.97e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.738905305049512,0.787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0.32592226663359,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.93398740871803,0,0,1.84627208191604,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41532103205343,0,0.296521128680622,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0.992332043623902,0,2.43585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0.455324382702595,0,0.576169937778896,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31522474323834,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0.563903507879121,0.0644578879735772,0.399764623699716,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,2.13233981900981,0,0.387533459016037,0.248298857183432,0,0,0,0.653150243690884,0,2.1552656964668,0.430333232356058,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0.961705476909699 | |||
|short_description=p15@RAB30 | |||
}} |
Latest revision as of 18:19, 24 September 2015
Short description: | p15@RAB30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RAB30_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000534301_5end |
EntrezGene: | RAB30 |
HGNC: | 9770 |
UniProt: | E9PS06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 1.30e-19 | 1 |
mucosa-associated lymphoid tissue | 1.30e-19 | 1 |
lymphoid tissue | 1.30e-19 | 1 |
tonsillar ring | 1.30e-19 | 1 |
vermiform appendix | 2.25e-19 | 1 |
caecum | 2.25e-19 | 1 |
midgut | 2.25e-19 | 1 |
submandibular gland | 3.91e-19 | 1 |
submandibular gland primordium | 3.91e-19 | 1 |
throat | 1.89e-10 | 2 |
major salivary gland | 2.99e-10 | 2 |
intestine | 1.07e-09 | 17 |
colon | 5.87e-09 | 9 |
large intestine | 1.73e-07 | 11 |
gastrointestinal system | 6.97e-07 | 25 |