FFCP PHASE1:Hg19::chr5:134369905..134369972,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9004 | |||
|TSSclassifier=strong | |||
|UniProt=P78337 | |||
|association_with_transcript=0bp_to_NM_002653,uc010jea.2_5end | |||
|cluster_id=chr5:134369905..134369972,- | |||
|coexpression_cluster_id=C4464 | |||
|description=CAGE_peak_1_at_PITX1_5end | |||
|id=chr5:134369905..134369972,- | |||
|ontology_enrichment_celltype=CL:0000066!6.04e-19!254;CL:0000223!1.15e-16!59;CL:0002076!1.45e-16!43;CL:0002251!5.19e-10!21;CL:0000220!3.04e-07!246;CL:0002321!5.48e-07!248;CL:0002368!6.64e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.79e-14;42!CL:0002251;2.83e-12;20!CL:0002368;6.81e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.85e-19,42;CL:0000066,1.39e-18,253;CL:0000223,1.39e-18,58;CL:0002251,2.73e-12,20;CL:0002368,6.48e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;1.47e-09;58!UBERON:0008947;6.61e-08;29!UBERON:0006595;3.24e-07;86 | |||
|ontology_enrichment_disease=DOID:162!5.75e-29!235;DOID:14566!2.47e-28!239;DOID:0050687!8.38e-26!143;DOID:305!1.48e-24!106;DOID:0050686!3.16e-07!137;DOID:1749!3.34e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.42e-08;14!DOID:305;3.92e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.76e-31,235;DOID:14566,5.19e-30,239;DOID:0050687,1.86e-26,143;DOID:305,2.17e-25,106;DOID:1749,6.61e-08,14;DOID:0050686,1.14e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.04e-29!169;UBERON:0000925!4.04e-29!169;UBERON:0006595!4.04e-29!169;UBERON:0001007!4.00e-27!155;UBERON:0001555!4.00e-27!155;UBERON:0007026!4.00e-27!155;UBERON:0004921!2.02e-23!129;UBERON:0004185!2.02e-23!129;UBERON:0000077!4.63e-20!130;UBERON:0001004!2.02e-16!72;UBERON:0000161!1.34e-14!35;UBERON:0003104!2.50e-13!238;UBERON:0009142!2.50e-13!238;UBERON:0001041!4.31e-13!98;UBERON:0000065!2.72e-11!53;UBERON:0008947!5.09e-11!38;UBERON:0003258!5.09e-11!38;UBERON:0005911!6.00e-11!82;UBERON:0000072!6.18e-11!46;UBERON:0003102!1.24e-09!95;UBERON:0001046!2.29e-09!19;UBERON:0005153!2.61e-09!37;UBERON:0000063!3.38e-09!97;UBERON:0000166!1.37e-08!21;UBERON:0000165!1.89e-08!28;UBERON:0000930!1.89e-08!28;UBERON:0000481!4.40e-08!347;UBERON:0005181!4.65e-08!35;UBERON:0005178!5.16e-08!34;UBERON:0002224!5.16e-08!34;UBERON:0000344!1.47e-07!12;UBERON:0000162!1.59e-07!14;UBERON:0001353!1.59e-07!14;UBERON:0000163!1.59e-07!14;UBERON:0006866!1.59e-07!14;UBERON:0000164!1.59e-07!14;UBERON:0000931!1.59e-07!14;UBERON:0005157!1.71e-07!51;UBERON:0001444!6.64e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;5.05e-13;33!UBERON:0001555;2.68e-10;54!UBERON:0000072;3.05e-10;37!UBERON:0001041;6.61e-09;14!UBERON:0000165;1.44e-08;28!UBERON:0000065;2.94e-08;44!UBERON:0001004;3.92e-08;65!UBERON:0005409;6.23e-08;22!UBERON:0000344;1.29e-07;20!UBERON:0000161;1.57e-07;19!UBERON:0000166;1.57e-07;19!UBERON:0005911;1.75e-07;36!UBERON:0004807;4.96e-07;22!UBERON:0001737;5.23e-07;9!UBERON:0001557;5.23e-07;9!UBERON:0005181;7.69e-07;35!UBERON:0002367;8.52e-07;11!UBERON:0010147;8.52e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.30e-29,160;UBERON:0000925,2.30e-29,160;UBERON:0006595,2.30e-29,160;UBERON:0001007,1.10e-27,145;UBERON:0001555,1.10e-27,145;UBERON:0007026,1.10e-27,145;UBERON:0004921,4.22e-25,118;UBERON:0001004,1.57e-15,74;UBERON:0000161,2.07e-15,36;UBERON:0001041,2.07e-13,87;UBERON:0000072,1.43e-10,47;UBERON:0000065,1.99e-10,54;UBERON:0005911,2.08e-10,82;UBERON:0001046,2.45e-10,19;UBERON:0008947,1.18e-09,38;UBERON:0003258,1.18e-09,38;UBERON:0003102,3.42e-09,99;UBERON:0000166,1.00e-08,22;UBERON:0005153,1.07e-08,37;UBERON:0000165,1.79e-08,29;UBERON:0000930,1.79e-08,29;UBERON:0000162,2.88e-08,14;UBERON:0001353,2.88e-08,14;UBERON:0000163,2.88e-08,14;UBERON:0006866,2.88e-08,14;UBERON:0000164,2.88e-08,14;UBERON:0000931,2.88e-08,14;UBERON:0000344,1.20e-07,20;UBERON:0005181,2.34e-07,35;UBERON:0004122,2.53e-07,15;UBERON:0005178,2.72e-07,34;UBERON:0002224,2.72e-07,34;UBERON:0005157,4.01e-07,47;UBERON:0001737,5.15e-07,9;UBERON:0002367,8.25e-07,11;UBERON:0010147,8.25e-07,11;UBERON:0009846,8.25e-07,11;UBERON:0003353,8.25e-07,11;UBERON:0004902,8.25e-07,11;UBERON:0003820,8.25e-07,11;UBERON:0009847,8.25e-07,11 | |||
|phase1_expression=0,0,0.140954404095971,2.00146596706261,1.78784437770915,0,2.53299878168311,3.79031924056099,1.04474251279935,0.982935746006035,1.39560233594486,0.218441372130172,0.527533956456907,0.495065411840187,0,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0.251085279189606,0.0764134057479513,0,0,0,0,0.154816123316076,57.9235371421724,59.6387719180935,92.8082565518637,34.0855682553327,3.83856927716038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,85.6610791151422,57.6538597231273,82.127976250787,21.4727205703797,42.823868586632,0,0,0.087834785693126,0.196468613246569,20.4005361443824,21.8762821242813,0.324547393654683,0.696518949197069,0.531831842075461,0,0,0,0,0,0,0,0,1.92582629358047,0.208994966536811,0,0.71153252537342,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,106.406948722778,0.496971951695318,4.55869841992487,0.264818361626438,0.573673241497627,3.19201543978521,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,7.73260725051529,0,0,1.64393548606981,2.93586246609412,0,0.421352420106746,0,0.122834317311768,0.309977343527296,5.94001428641027,12.857880322485,0,2.15585442544872,5.72342787443825,8.63317787116553,0,0.438977620880838,5.21029252858333,7.06118876861005,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.309157587715317,1.8034837803194,2.60563598864226,2.19409231913646,1.75386609290158,0,0,4.52608959092673,0.355009592516614,0.10075209822764,6.44330250779853,49.8613001161306,35.1842495562177,36.7109882097925,0,0.132529768321485,2.78865462886844,1.14027160516907,1.26160425437814,0,14.0804579096834,14.1513006402435,11.0507937081984,0.464367928031979,0,46.1396520155391,46.8665438417123,39.2847978710076,42.9043553929012,42.7043710421116,41.0478171062197,32.76400788292,35.712306652813,35.7814855960143,0.738155454624648,7.01208869017229,1.2347220339942,1.47008711385542,0,0,0,0,13.4057398011994,4.11762744716461,0.439001141634502,1.1240175325762,0.603173834469785,70.9227489914337,3.25808305310325,2.07986957055916,0,0,0.352226082707465,0,0,0,0.790204397959275,0,0,0,0,15.9347517777521,35.4442290499594,23.2511159477514,5.0152772713595,3.19697332365358,1.53353071666084,0,0,0,0,0,0.253991577168676,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,6.33431407213111,10.7296933755565,0.845302752556,19.6794206272804,19.7614130131596,32.1509217827678,0,38.3647937783183,13.1539754165496,57.517890171493,35.3993344815731,0.977208552881205,9.95097456479128,56.2285829782735,1.50719688529793,1.74306691720059,0.099972991182057,0,0,0,0.239624855491583,0,5.70547620162874,3.61953266668948,1.2328579353023,4.47652408099739,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,2.00068208423871,0,0.207970861530807,0.356857977594324,0.473107245101804,0,0.300946099727719,11.3703752027992,22.7640756843511,21.255219153134,0.368738337083406,29.1928944612758,2.54541504701563,1.71571711905428,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0.128139149255701,0.511707249066704,2.73451665944133,0,2.46735510084249,0.887808626565635,1.56041596426237,0,0.581051892299796,23.4467332207747,17.4440629163858,164.088322283767,87.0293517087719,5.46273504020151,61.3662262010105,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,5.04297716285649,8.62736988382172,0.256450125116389,0.656029291399411,1.62689197332152,0.9273691048295,20.786268513764,14.9342194856264,13.208107373912,14.3013254128035,0,16.4340221096607,0.462145851343933,0.460511024178389,1.92971201478343,10.7420244868274,17.5470199636217,1.87498580315422,10.2386840993748,25.2885920502296,21.3330974775268,5.87018477475087,32.9774365589093,1.39453664789186,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0.18532421910392,1.43124886741991,0.372158369359667,0.316379424718726,0,11.0036050263874,4.2793898803392,0,0,57.9189313418273,25.5319437654531,28.5106013676561,0,0,0,115.081562425143,0,7.39551027297288,25.6619833447013,145.930405776232,0,0,0,0,0.578775534266688,0.655894752046633,7.50768394762005,10.5339989353915,6.19730325570931,25.3838093401171,18.3725706694537,5.35006577221875,1.41904425628239,18.3663642708968,13.8303855043159,7.96893664908002,8.74836800612457,43.4923949519315,60.3272047982209,59.8900416737274,1.03558180854457,9.04061282609583,15.1624328100863,8.86860307073351,4.59446800413919,0,0,0,0,0,0,0,0,17.3054995226506,9.62479855263359,25.2391422460463,27.3130667434807,0,2.63224820389132,12.1163967273905,0,0,0,0.324621940274555,0,0.228234679033192,89.4642204863963,2.50634477090067,0,0,0,0,0,2.45792611446766,0.671028323677248,2.0021897005429,5.47086667125713,0.278406173895242,62.7745734633333,38.1342506651136,32.3079808957885,0,21.7083026873535,0.73254089635947,1.94176834799221,0,15.0592157807399,0.23874448473769,0.296964680832639,0,0,0.140669416410513,6.56721359635145,0,168.055824869883,1.9924798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| |||
|short_description=p1@PITX1 | |||
}} |
Latest revision as of 17:45, 24 September 2015
Short description: | p1@PITX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PITX1_5end |
Coexpression cluster: | C4464_anaplastic_Prostate_esophagus_Smooth_glassy_cervical_biphenotypic |
Association with transcript: | 0bp_to_NM_002653, uc010jea.2_5end |
EntrezGene: | PITX1 |
HGNC: | 9004 |
UniProt: | P78337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.85e-19 | 42 |
epithelial cell | 1.39e-18 | 253 |
endodermal cell | 1.39e-18 | 58 |
epithelial cell of alimentary canal | 2.73e-12 | 20 |
respiratory epithelial cell | 6.48e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.76e-31 | 235 |
disease of cellular proliferation | 5.19e-30 | 239 |
cell type cancer | 1.86e-26 | 143 |
carcinoma | 2.17e-25 | 106 |
squamous cell carcinoma | 6.61e-08 | 14 |
organ system cancer | 1.14e-07 | 137 |