FFCP PHASE1:Hg19::chr5:134369848..134369853,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:134369848..134369853,-
|short_description=p6@PITX1
|description=CAGE_peak_6_at_PITX1_5end
|association_with_transcript=110bp_to_NM_002653,uc010jea.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5307 | |EntrezGene=5307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9004 | |HGNC=9004 | ||
|TSSclassifier=strong | |||
|UniProt=P78337 | |UniProt=P78337 | ||
|association_with_transcript=110bp_to_NM_002653,uc010jea.2_5end | |||
|cluster_id=chr5:134369848..134369853,- | |||
|description=CAGE_peak_6_at_PITX1_5end | |||
|id=chr5:134369848..134369853,- | |||
|ontology_enrichment_celltype=CL:0002076!6.14e-11!43;CL:0000066!9.30e-10!254;CL:0000223!1.64e-08!59;CL:0002368!1.58e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.79e-07;13!CL:0002202;5.28e-07;9!CL:0002632;5.28e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,4.22e-07,9;CL:0002632,4.22e-07,9;CL:0002368,4.84e-07,13;CL:0002076,5.90e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.23e-12!106;DOID:0050687!2.20e-11!143;DOID:162!1.29e-10!235;DOID:14566!6.06e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.67e-19!169;UBERON:0000925!1.67e-19!169;UBERON:0006595!1.67e-19!169;UBERON:0001007!5.27e-16!155;UBERON:0001555!5.27e-16!155;UBERON:0007026!5.27e-16!155;UBERON:0001004!7.56e-14!72;UBERON:0004921!1.06e-13!129;UBERON:0004185!1.06e-13!129;UBERON:0000161!9.03e-13!35;UBERON:0000077!1.08e-11!130;UBERON:0001737!5.61e-11!9;UBERON:0000065!3.98e-10!53;UBERON:0003104!1.82e-09!238;UBERON:0009142!1.82e-09!238;UBERON:0001557!4.39e-09!19;UBERON:0000072!6.19e-09!46;UBERON:0001041!1.38e-08!98;UBERON:0000162!1.20e-07!14;UBERON:0001353!1.20e-07!14;UBERON:0000163!1.20e-07!14;UBERON:0006866!1.20e-07!14;UBERON:0000164!1.20e-07!14;UBERON:0000931!1.20e-07!14;UBERON:0000165!4.83e-07!28;UBERON:0000930!4.83e-07!28;UBERON:0004122!6.06e-07!15;UBERON:0000166!8.28e-07!21;UBERON:0008947!8.77e-07!38;UBERON:0003258!8.77e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.12e-18;9!UBERON:0001557;2.12e-18;9!UBERON:0001041;4.51e-12;14!UBERON:0001043;9.68e-12;3!UBERON:0000072;4.20e-09;37!UBERON:0000007;6.47e-09;2!UBERON:0000065;2.56e-08;44!UBERON:0004921;2.66e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.08e-18,9;UBERON:0001557,4.62e-17,19;UBERON:0004921,7.13e-16,118;UBERON:0001041,6.67e-15,87;UBERON:0004119,4.08e-13,160;UBERON:0000925,4.08e-13,160;UBERON:0006595,4.08e-13,160;UBERON:0001007,7.52e-13,145;UBERON:0001555,7.52e-13,145;UBERON:0007026,7.52e-13,145;UBERON:0000072,3.96e-12,47;UBERON:0001043,1.01e-11,3;UBERON:0009143,1.01e-11,3;UBERON:0000065,1.07e-11,54;UBERON:0001004,1.21e-11,74;UBERON:0008947,2.15e-09,38;UBERON:0003258,2.15e-09,38;UBERON:0000007,7.29e-09,2;UBERON:0011216,2.39e-07,223 | |||
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| ||
|short_description=p6@PITX1 | |||
}} | }} |
Latest revision as of 17:42, 24 September 2015
Short description: | p6@PITX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PITX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 110bp_to_NM_002653, uc010jea.2_5end |
EntrezGene: | PITX1 |
HGNC: | 9004 |
UniProt: | P78337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 4.22e-07 | 9 |
epithelial cell of lower respiratory tract | 4.22e-07 | 9 |
respiratory epithelial cell | 4.84e-07 | 13 |
endo-epithelial cell | 5.90e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.08e-18 | 9 |
upper respiratory tract | 4.62e-17 | 19 |
subdivision of digestive tract | 7.13e-16 | 118 |
foregut | 6.67e-15 | 87 |
endoderm-derived structure | 4.08e-13 | 160 |
endoderm | 4.08e-13 | 160 |
presumptive endoderm | 4.08e-13 | 160 |
digestive system | 7.52e-13 | 145 |
digestive tract | 7.52e-13 | 145 |
primitive gut | 7.52e-13 | 145 |
segment of respiratory tract | 3.96e-12 | 47 |
esophagus | 1.01e-11 | 3 |
esophageal region | 1.01e-11 | 3 |
respiratory tract | 1.07e-11 | 54 |
respiratory system | 1.21e-11 | 74 |
respiratory primordium | 2.15e-09 | 38 |
endoderm of foregut | 2.15e-09 | 38 |
pituitary gland | 7.29e-09 | 2 |
organ system subdivision | 2.39e-07 | 223 |