FFCP PHASE1:Hg19::chr17:41150479..41150500,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6155 | |EntrezGene=6155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10328 | |HGNC=10328 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_uc002ick.2_5end | |association_with_transcript=-30bp_to_uc002ick.2_5end | ||
|cluster_id=chr17:41150479..41150500,+ | |||
|coexpression_cluster_id=C2409 | |||
|description=CAGE_peak_2_at_RPL27_5end | |description=CAGE_peak_2_at_RPL27_5end | ||
|id=chr17:41150479..41150500,+ | |id=chr17:41150479..41150500,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.29e-38!679;CL:0000004!1.29e-38!679;CL:0000255!1.29e-38!679;CL:0000012!2.76e-38!682;CL:0002321!3.98e-36!248;CL:0000220!1.01e-35!246;CL:0000066!1.33e-26!254;CL:0000144!7.03e-25!625;CL:0000003!2.79e-22!722;CL:0000222!5.85e-22!119;CL:0000055!1.17e-19!180;CL:0002371!1.39e-17!591;CL:0000393!5.70e-15!60;CL:0000211!5.70e-15!60;CL:0000680!1.26e-14!57;CL:0000056!1.26e-14!57;CL:0000355!1.26e-14!57;CL:0000183!1.38e-14!59;CL:0000187!6.48e-14!54;CL:0000192!8.94e-13!42;CL:0000514!8.94e-13!42;CL:0000359!7.15e-12!32;CL:0000076!2.19e-11!62;CL:0000063!2.60e-11!578;CL:0000213!2.54e-08!57;CL:0000215!2.54e-08!57;CL:0000071!1.83e-07!18;CL:0002546!1.83e-07!18 | |ontology_enrichment_celltype=CL:0000548!1.29e-38!679;CL:0000004!1.29e-38!679;CL:0000255!1.29e-38!679;CL:0000012!2.76e-38!682;CL:0002321!3.98e-36!248;CL:0000220!1.01e-35!246;CL:0000066!1.33e-26!254;CL:0000144!7.03e-25!625;CL:0000003!2.79e-22!722;CL:0000222!5.85e-22!119;CL:0000055!1.17e-19!180;CL:0002371!1.39e-17!591;CL:0000393!5.70e-15!60;CL:0000211!5.70e-15!60;CL:0000680!1.26e-14!57;CL:0000056!1.26e-14!57;CL:0000355!1.26e-14!57;CL:0000183!1.38e-14!59;CL:0000187!6.48e-14!54;CL:0000192!8.94e-13!42;CL:0000514!8.94e-13!42;CL:0000359!7.15e-12!32;CL:0000076!2.19e-11!62;CL:0000063!2.60e-11!578;CL:0000213!2.54e-08!57;CL:0000215!2.54e-08!57;CL:0000071!1.83e-07!18;CL:0002546!1.83e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.47e-11;32!CL:0000192;3.67e-09;43!CL:0000187;4.22e-08;55!CL:0000071;1.88e-07;18!CL:0000393;2.62e-07;61!CL:0000211;2.62e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.88e-36,250;CL:0000066,8.48e-27,253;CL:0000222,3.26e-22,121;CL:0000393,1.43e-14,61;CL:0000211,1.43e-14,61;CL:0000680,3.22e-14,58;CL:0000056,3.22e-14,58;CL:0000355,3.22e-14,58;CL:0000187,1.65e-13,55;CL:0000192,2.57e-12,43;CL:0000514,2.57e-12,43;CL:0000359,7.11e-12,32;CL:0000076,1.47e-11,63;CL:0000213,8.41e-09,58;CL:0000215,8.41e-09,58;CL:0000071,1.82e-07,18;CL:0002546,1.82e-07,18;CL:0000115,5.80e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;3.67e-09;43!CL:0000355;4.84e-08;58!CL:0002546;1.88e-07;18 | |||
|ontology_enrichment_disease=DOID:14566!9.50e-14!239;DOID:162!2.51e-13!235;DOID:0050687!9.89e-07!143 | |ontology_enrichment_disease=DOID:14566!9.50e-14!239;DOID:162!2.51e-13!235;DOID:0050687!9.89e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,9.33e-14,239;DOID:162,2.46e-13,235;DOID:0050687,9.77e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001637!5.07e-16!42;UBERON:0003509!5.07e-16!42;UBERON:0004572!5.07e-16!42;UBERON:0000490!5.30e-16!138;UBERON:0002049!4.97e-15!79;UBERON:0007798!4.97e-15!79;UBERON:0003914!5.41e-15!118;UBERON:0001981!1.07e-14!60;UBERON:0007500!1.07e-14!60;UBERON:0004537!1.07e-14!60;UBERON:0006965!1.07e-14!60;UBERON:0000486!5.22e-14!82;UBERON:0000055!9.01e-14!69;UBERON:0004872!1.57e-13!84;UBERON:0004290!1.58e-13!70;UBERON:0003104!5.40e-13!238;UBERON:0009142!5.40e-13!238;UBERON:0002100!1.57e-12!216;UBERON:0000914!5.14e-12!83;UBERON:0002329!5.14e-12!83;UBERON:0003077!5.14e-12!83;UBERON:0003059!5.14e-12!83;UBERON:0007282!5.14e-12!83;UBERON:0009618!5.14e-12!83;UBERON:0007285!5.14e-12!83;UBERON:0005256!6.46e-12!143;UBERON:0001134!8.49e-12!61;UBERON:0002036!8.49e-12!61;UBERON:0003082!8.49e-12!61;UBERON:0004573!1.75e-11!33;UBERON:0004571!1.75e-11!33;UBERON:0002385!2.20e-10!63;UBERON:0001015!2.20e-10!63;UBERON:0000383!2.20e-10!63;UBERON:0004535!1.61e-09!110;UBERON:0001009!1.11e-08!113;UBERON:0000119!4.63e-08!312;UBERON:0000483!1.38e-07!309;UBERON:0001986!1.83e-07!18;UBERON:0004638!1.83e-07!18;UBERON:0004852!1.83e-07!18;UBERON:0000487!3.27e-07!22 | |ontology_enrichment_uberon=UBERON:0001637!5.07e-16!42;UBERON:0003509!5.07e-16!42;UBERON:0004572!5.07e-16!42;UBERON:0000490!5.30e-16!138;UBERON:0002049!4.97e-15!79;UBERON:0007798!4.97e-15!79;UBERON:0003914!5.41e-15!118;UBERON:0001981!1.07e-14!60;UBERON:0007500!1.07e-14!60;UBERON:0004537!1.07e-14!60;UBERON:0006965!1.07e-14!60;UBERON:0000486!5.22e-14!82;UBERON:0000055!9.01e-14!69;UBERON:0004872!1.57e-13!84;UBERON:0004290!1.58e-13!70;UBERON:0003104!5.40e-13!238;UBERON:0009142!5.40e-13!238;UBERON:0002100!1.57e-12!216;UBERON:0000914!5.14e-12!83;UBERON:0002329!5.14e-12!83;UBERON:0003077!5.14e-12!83;UBERON:0003059!5.14e-12!83;UBERON:0007282!5.14e-12!83;UBERON:0009618!5.14e-12!83;UBERON:0007285!5.14e-12!83;UBERON:0005256!6.46e-12!143;UBERON:0001134!8.49e-12!61;UBERON:0002036!8.49e-12!61;UBERON:0003082!8.49e-12!61;UBERON:0004573!1.75e-11!33;UBERON:0004571!1.75e-11!33;UBERON:0002385!2.20e-10!63;UBERON:0001015!2.20e-10!63;UBERON:0000383!2.20e-10!63;UBERON:0004535!1.61e-09!110;UBERON:0001009!1.11e-08!113;UBERON:0000119!4.63e-08!312;UBERON:0000483!1.38e-07!309;UBERON:0001986!1.83e-07!18;UBERON:0004638!1.83e-07!18;UBERON:0004852!1.83e-07!18;UBERON:0000487!3.27e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.42e-12;42!UBERON:0003509;6.42e-12;42!UBERON:0004572;6.42e-12;42!UBERON:0004573;1.82e-10;33!UBERON:0004571;1.82e-10;33!UBERON:0007500;3.81e-10;56!UBERON:0001981;3.81e-10;56!UBERON:0004537;3.81e-10;56!UBERON:0003914;8.22e-09;74!UBERON:0000490;5.66e-08;33!UBERON:0000055;1.08e-07;65!UBERON:0002049;1.83e-07;75!UBERON:0007798;1.83e-07;75!UBERON:0004638;1.88e-07;18!UBERON:0001986;1.88e-07;18!UBERON:0004852;1.88e-07;18!UBERON:0000487;3.20e-07;22!UBERON:0000947;8.44e-07;21!UBERON:0010191;8.44e-07;21 | |||
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| ||
|short_description=p2@RPL27 | |short_description=p2@RPL27 | ||
}} | }} |
Latest revision as of 17:00, 24 September 2015
Short description: | p2@RPL27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL27_5end |
Coexpression cluster: | C2409_embryonic_Mallassezderived_acute_Endothelial_Smooth_mucinous_iPS |
Association with transcript: | -30bp_to_uc002ick.2_5end |
EntrezGene: | RPL27 |
HGNC: | 10328 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.88e-36 | 250 |
epithelial cell | 8.48e-27 | 253 |
mesodermal cell | 3.26e-22 | 121 |
electrically responsive cell | 1.43e-14 | 61 |
electrically active cell | 1.43e-14 | 61 |
muscle precursor cell | 3.22e-14 | 58 |
myoblast | 3.22e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.22e-14 | 58 |
muscle cell | 1.65e-13 | 55 |
smooth muscle cell | 2.57e-12 | 43 |
smooth muscle myoblast | 2.57e-12 | 43 |
vascular associated smooth muscle cell | 7.11e-12 | 32 |
squamous epithelial cell | 1.47e-11 | 63 |
lining cell | 8.41e-09 | 58 |
barrier cell | 8.41e-09 | 58 |
blood vessel endothelial cell | 1.82e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.82e-07 | 18 |
endothelial cell | 5.80e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 9.33e-14 | 239 |
cancer | 2.46e-13 | 235 |
cell type cancer | 9.77e-07 | 143 |