FFCP PHASE1:Hg19::chr11:805197..805221,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55367 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16491 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=8bp_to_ENST00000527357_5end | |||
|cluster_id=chr11:805197..805221,- | |||
|description=CAGE_peak_4_at_PIDD_5end | |||
|id=chr11:805197..805221,- | |||
|ontology_enrichment_celltype=CL:0000066!5.83e-15!254;CL:0000548!3.60e-14!679;CL:0000004!3.60e-14!679;CL:0000255!3.60e-14!679;CL:0000012!1.05e-13!682;CL:0002321!5.47e-12!248;CL:0000055!7.87e-12!180;CL:0000220!1.50e-11!246;CL:0000003!4.30e-11!722;CL:0000115!1.58e-09!35;CL:0000144!1.58e-09!625;CL:0002139!9.17e-09!24;CL:0002078!1.20e-08!44;CL:1000449!6.22e-08!16;CL:0000222!6.24e-08!119;CL:0000071!6.42e-08!18;CL:0002546!6.42e-08!18;CL:0002371!3.94e-07!591;CL:0000213!5.18e-07!57;CL:0000215!5.18e-07!57;CL:1000497!9.15e-07!18;CL:0002518!9.15e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.07e-09;36!CL:0002139;4.67e-09;24!CL:0000071;1.11e-08;18!CL:1000449;1.45e-08;15!CL:0002681;5.30e-07;12!CL:0002584;5.30e-07;12!CL:1000497;9.85e-07;17!CL:0002518;9.85e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.37e-11,36;CL:0000066,5.96e-11,253;CL:0002078,1.40e-09,45;CL:0002321,1.66e-09,250;CL:0002139,3.48e-09,24;CL:0000071,1.05e-08,18;CL:0002546,1.05e-08,18;CL:1000449,1.83e-08,15;CL:0000222,6.51e-08,121;CL:0000213,4.44e-07,58;CL:0000215,4.44e-07,58;CL:0002681,6.81e-07,12;CL:0002584,6.81e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;1.11e-08;18 | |||
|ontology_enrichment_disease=DOID:14566!7.14e-11!239;DOID:162!3.16e-10!235;DOID:2531!2.47e-08!51;DOID:0060083!2.47e-08!51;DOID:1240!2.08e-07!39;DOID:0050686!3.62e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.54e-07,51;DOID:0060083,1.54e-07,51;DOID:1240,3.03e-07,39;DOID:14566,9.36e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004211!6.22e-08!16;UBERON:0001285!6.22e-08!16;UBERON:0007684!6.22e-08!16;UBERON:0003220!6.22e-08!16;UBERON:0004208!6.22e-08!16;UBERON:0001986!6.42e-08!18;UBERON:0004638!6.42e-08!18;UBERON:0004852!6.42e-08!18;UBERON:0000055!1.49e-07!69;UBERON:0000487!4.24e-07!22;UBERON:0002049!4.50e-07!79;UBERON:0007798!4.50e-07!79;UBERON:0006555!4.63e-07!17;UBERON:0005103!4.63e-07!17;UBERON:0000083!4.63e-07!17;UBERON:0009201!4.63e-07!17;UBERON:0004819!4.63e-07!17;UBERON:0006553!4.63e-07!17;UBERON:0003074!4.63e-07!17;UBERON:0003060!4.63e-07!17;UBERON:0003914!6.69e-07!118;UBERON:0000353!7.69e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.11e-08;18!UBERON:0001986;1.11e-08;18!UBERON:0004852;1.11e-08;18!UBERON:0006555;1.45e-08;15!UBERON:0004819;1.45e-08;15!UBERON:0001285;1.45e-08;15!UBERON:0007684;1.45e-08;15!UBERON:0000487;3.19e-08;22!UBERON:0000490;1.10e-07;33!UBERON:0000353;3.43e-07;15!UBERON:0003914;4.73e-07;74!UBERON:0002113;5.26e-07;24!UBERON:0011143;5.26e-07;24!UBERON:0001225;5.30e-07;12!UBERON:0008987;5.30e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.05e-08,18;UBERON:0001986,1.05e-08,18;UBERON:0004852,1.05e-08,18;UBERON:0004211,1.83e-08,15;UBERON:0009773,1.83e-08,15;UBERON:0001231,1.83e-08,15;UBERON:0001285,1.83e-08,15;UBERON:0007684,1.83e-08,15;UBERON:0004208,1.83e-08,15;UBERON:0000487,4.77e-08,22;UBERON:0000055,8.68e-08,68;UBERON:0006555,1.71e-07,16;UBERON:0004819,1.71e-07,16;UBERON:0000353,4.66e-07,15;UBERON:0003914,5.75e-07,117;UBERON:0001225,6.81e-07,12;UBERON:0008987,6.81e-07,12;UBERON:0002049,8.46e-07,78;UBERON:0007798,8.46e-07,78 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.12763523276777,1.0007329835313,1.78784437770915,1.74467704820074,0,1.26343974685366,0.522371256399677,3.68600904752263,23.7252397110625,3.71350332621293,0.263766978228454,0.618831764800233,3.64537113300707,2.6893005858071,3.01347264011988,4.38186054232424,2.43966399395253,2.46242116153576,3.4680117511523,0.313454721478088,2.57612388417951,3.01123735160345,1.50651167513763,3.05653622991805,2.62721886239826,1.96776953284198,0,0,0,4.59710612239464,1.50602959389125,0.369754010166788,0.46480320348181,0.853015394924529,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,1.58030450865046,0.590129310341499,0.393010762749165,0,2.84217042164153,0.32592226663359,0,0,1.44833593950726,0.589211814949674,1.10766947291811,0.270803863765016,4.73937882984998,2.21100890851793,4.76869923350661,3.86890024900188,5.506258628966,0.593146252648242,0.535081656179426,1.04535523804977,4.30575502250752,0.383220493601921,0,1.01207876807801,0.318565414324097,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0.144824403882799,0,1.34140171940727,0.639312809217652,2.1686349143074,1.50401373190767,1.44846518960824,0.795285947051099,1.45990461090791,0.756278537312543,1.55210578223795,1.14185221401064,0.0654895377488563,3.27865759463288,0.741568885568859,0,0,0,0,0,0,1.98762407366705,4.30117297553062,8.67851254018986,1.13061588384802,3.77549492588915,6.05259692268148,4.59788926380983,3.87625138753993,2.49036383880697,4.01664735317604,6.8480983908555,3.04108842287405,4.39311703586705,2.20597848207521,9.72170337458112,3.03619076165871,2.69435247151404,2.81528701208306,12.2653309972707,6.6448596169769,4.58004359826018,0,0,3.92484646928281,0.496971951695318,0.759783069987479,4.36950296683622,6.59724227722272,2.12801029319014,0,1.06748995729705,0.74000264525148,1.55605517699883,1.88594940897563,1.47115712802113,0.605429710579726,0,3.51482147750695,1.5608003841516,3.99330275081114,1.34503812496621,2.46612447151906,0.809364721840658,0.98315564691574,2.04154171254893,1.71968044236475,1.75653827998801,1.18800285728205,0.989067717114227,3.64064544775211,6.46756327634615,0.505008341862199,1.7516592782075,0.554128230968366,0.877955241761676,1.22595118319608,0.901428353439581,0.794025282120147,6.81680615617675,4.69826255400848,1.27159140695737,4.20127534518163,1.03052529238439,10.5632621418708,3.53622027030021,2.36286865137773,0.779496041289589,3.5340728394176,1.74894807420369,5.17267381820198,9.9402685904652,1.30977727695932,2.7129694769678,0.386521706326594,1.09098448236334,0.573609190778008,4.02513230227665,2.65059536642971,3.25343040034651,5.39037486079926,3.5324919122588,1.09493207722749,0,0.643240938192885,2.76269842704961,4.17931135228781,8.66255378003503,1.18306800039844,1.18009283054671,0.241011029883482,0.661763836394364,1.52515610864684,0.71181185733329,0.674156540800822,1.76599318612811,0.769494313892781,7.38155454624648,4.20725321410337,2.057870056657,2.94017422771084,0,0,0,3.5317047953172,1.22988438543114,1.54411029268673,0.658501712451753,1.1240175325762,0.904760751704678,1.66659201285353,1.95484983186195,10.3993478527958,7.21656710126366,2.43453850447661,4.46153038096122,3.17606185074362,0.925971025153221,1.90254152234598,2.37061319387782,2.57545848628462,0.246217006087397,0.234004265139238,0.297262324577456,0,0.503946384596579,0.283550194484773,1.34337784054272,3.19697332365358,3.83382679165211,0,0.968532774145487,0.207328115540772,0.144119953416961,0.25248486685276,1.39695367442772,4.58386110669933,5.86087236050235,1.71072446022705,3.18765227380303,6.60754727256618,4.0015700568281,1.00917975910825,0.87192013766656,0.7333828582095,1.93907573636667,50.0719024192635,0,1.32969058292435,0,3.85811061393213,1.41849132023278,3.46348832720929,0.714889968290738,1.08524321078289,5.76268235746538,0.977208552881205,0.355391948742546,4.75171123760058,1.20575750823834,0.871533458600294,2.0994328148232,0,0,2.10833939483032,0.479249710983165,0,0,0.579125226670317,0.410952645100767,0,3.92298003977345,0.197030760201927,0.215627574859517,0.385029108839245,2.03275699377971,0,0,2.68026024534958,0,0,0,0,0.49076596687656,1.00034104211935,1.89885516589815,0.623912584592421,0.535286966391485,0.315404830067869,0.937131319941706,1.20378439891088,2.27407504055985,2.0694614258501,1.32845119707087,0.921845842708516,2.95404289191482,2.15381273209015,1.37257369524342,0.413536052245775,0,0.213455115606889,4.24378600024763,14.9791895559447,6.95497674658265,0.248107807818777,0.920771839728375,1.40330047216537,0.512556597022804,2.55853624533352,1.28683136914886,4.45254199334973,1.3878872442239,0.710246901252508,1.56041596426237,0.519254429183621,2.09178681227927,0.725156697549733,1.00253235151642,1.38121483403844,1.49258782613989,1.27463817604702,3.67148361886388,5.86559496779635,2.23344477602803,10.1965469992991,4.38417673959782,3.58875538235777,11.3733384070897,4.762623747742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| |||
|short_description=p4@PIDD | |||
}} |
Latest revision as of 17:00, 24 September 2015
Short description: | p4@PIDD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PIDD_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000527357_5end |
EntrezGene: | PIDD |
HGNC: | 16491 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.37e-11 | 36 |
epithelial cell | 5.96e-11 | 253 |
meso-epithelial cell | 1.40e-09 | 45 |
embryonic cell | 1.66e-09 | 250 |
endothelial cell of vascular tree | 3.48e-09 | 24 |
blood vessel endothelial cell | 1.05e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.05e-08 | 18 |
epithelial cell of nephron | 1.83e-08 | 15 |
mesodermal cell | 6.51e-08 | 121 |
lining cell | 4.44e-07 | 58 |
barrier cell | 4.44e-07 | 58 |
kidney cortical cell | 6.81e-07 | 12 |
renal cortical epithelial cell | 6.81e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.05e-08 | 18 |
endothelium | 1.05e-08 | 18 |
cardiovascular system endothelium | 1.05e-08 | 18 |
nephron epithelium | 1.83e-08 | 15 |
renal tubule | 1.83e-08 | 15 |
nephron tubule | 1.83e-08 | 15 |
nephron | 1.83e-08 | 15 |
uriniferous tubule | 1.83e-08 | 15 |
nephrogenic mesenchyme | 1.83e-08 | 15 |
simple squamous epithelium | 4.77e-08 | 22 |
vessel | 8.68e-08 | 68 |
excretory tube | 1.71e-07 | 16 |
kidney epithelium | 1.71e-07 | 16 |
parenchyma | 4.66e-07 | 15 |
epithelial tube | 5.75e-07 | 117 |
cortex of kidney | 6.81e-07 | 12 |
renal parenchyma | 6.81e-07 | 12 |
vasculature | 8.46e-07 | 78 |
vascular system | 8.46e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.54e-07 | 51 |
immune system cancer | 1.54e-07 | 51 |
leukemia | 3.03e-07 | 39 |
disease of cellular proliferation | 9.36e-07 | 239 |